University of Rostock

Department of Anatomy

Neuroscience Group

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Rat connectome



Magnocellular basal forebrain neuronal complex right


Abbreviation
MBFNC
Color       
Superior regionsBasal forebrain

SynonymsAbbr.Language
Magnocellular basal forebrain neuronal complexMBFNCEng
 BNC 
Sublenticular gray  
Cholinergic basal nuclear complex Eng
Medial septum diagonal band complex Eng
Basal forebrain cholinergic system  
Medial septum nucleus of the diagonal band complex Eng
Basal nucleus complex  
Basal forebrain nuclei Eng

SubregionsSide
Medial septum dorsal band complexright
Substantia innominata nucleus basalis complexright
Zona between horizontal limb of diagonal band of Broca and olfactory tubercleright
Cell bridge between tuberomammillary nucleus and caudal magnocellular nucleusright

Output to

NameSideAbbr.WeightDetails
Locus coeruleuscontraLC-0.5
Pontine reticular nucleus oral partcontraPnO-0.5
Pontine reticular nucleus caudal partcontraPNC-0.5
Raphe magnus nucleuscontraRMg-0.5
Suprachiasmatic nucleuscontraSCh-0.5
Optic chiasmcontraox-2
Supragranular layers of the auditory cortexcontraAULs1
Primary visual cortexcontraV1-0.5
Secondary visual cortex lateral areacontraV2L-0.5
Fasciculus retroflexusipsifr0
Ventral tegmental area A10ipsiVTA3
Locus coeruleusipsiLC-0.5
Pontine reticular nucleus oral partipsiPnO-0.5
Pontine reticular nucleus caudal partipsiPNC-0.5
Raphe magnus nucleusipsiRMg-0.5
Lateral hypothalamic areaipsiLH3
Suprachiasmatic nucleusipsiSCh-0.5
Optic chiasmipsiox-2
Lateral habenular nucleusipsiLHb1.5
Stria medullaris of the thalamusipsism1.5
Dorsal bank of the anterior portion of the rhinal fissureipsidarf1
Anterior two-thirds of the central amygdaloid nucleusipsiCeAntt3
Dentate gyrus molecular layeripsiDGmL1
Hilus of the dentate gyrusipsiHil-0.5
Hilar mossy cellsipsiHilmc-0.5
Hilus of the dentate gyrus granule cell layeripsiHilg-0.5
Field CA1 of hippocampus stratum lacunosum-moleculareipsiCA1LM-0.5
Field CA1 of hippocampus layer stratum radiatumipsiCA1rad1
Field CA1 of hippocampus layer stratum oriensipsiCA1or-0.5
Field CA2 of hippocampus layer stratum oriensipsiCA2or-0.5
Field CA3 of hippocampus layer stratum radiatumipsiCA3rad-0.5
Field CA3 of hippocampus layer stratum oriensipsiCA3or-0.5
Medial entorhinal cortex layer 3ipsiMEntLyL31
Medial entorhinal cortex layer 4ipsiMEntLyL42
Medial entorhinal cortex layer 5ipsiMEntLyL52
Medial entorhinal cortex layer 6ipsiMEntLyL62
Most ventral part of the pregenual part of the anteromedial cortexipsiFr2mvpg1
Supragranular layers of the auditory cortexipsiAULs1
Frontal polar cortexipsiFP1
Prefrontal cortexipsiPFC3
Prefrontal cortex supragenual partipsisgPFC1
Dorsal part of the pregenual sector of the prefrontal cortexipsidpgPFC1
Medial prefrontal cortexipsimPFC-0.5
Medial prefrontal cortex posterior partipsimPFCp1
Primary visual cortexipsiV1-0.5
Secondary visual cortex lateral areaipsiV2L-0.5

Input from

NameSideAbbr.WeightDetails
Medial habenular nucleus rostrocaudal partipsiMHbrc3
Field CA1 of hippocampus layer alveusipsiCA1L1a-0.5
Field CA1 of hippocampus layer stratum radiatumipsiCA1rad1
Field CA1 of hippocampus layer stratum pyramidal cellsipsiCA1L3spc1
Field CA1 of hippocampus layer stratum oriensipsiCA1or-0.5
Field CA2 of hippocampus layer stratum radiatumipsiCA2rad1
Field CA2 of hippocampus layer stratum oriensipsiCA2or-0.5
Field CA2 of hippocampus layer alveusipsiCA2L1a-0.5
Field CA3 of hippocampus layer stratum radiatumipsiCA3rad1
Field CA3 of hippocampus layer stratum oriensipsiCA3or-0.5
Field CA3 of hippocampus layer alveusipsiCA3L1a-0.5
Subiculum layer 4 pyramidal cellsipsiSuL4pc-0.5
Non-pyramidal cells of the hippocampusipsiHIPPnpc-0.5
Lateral septal nucleus dorsal partipsiLSD0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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