University of Rostock

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Rat connectome



Field CA1 of hippocampus stratum lacunosum-moleculare right


Abbreviation
CA1LM
Color       
Superior regionsField CA1 of hippocampus layer stratum lacunosum moleculare radiatum

SynonymsAbbr.Language
Field CA1 of hippocampus stratum lacunosum-moleculareCA1LMEng

SubregionsSide
Field CA1 of hippocampus layer stratum lacunosumright
Field CA1 of hippocampus layer stratum moleculareright
Field CA1 of hippocampus stratum lacunosum-moleculare superficial partright
Field CA1 of hippocampus stratum lacunosum-moleculare deep partright
Field CA1 of hippocampus stratum lacunosum-moleculare neuronright

Output to

NameSideAbbr.WeightDetails
Medial septal nucleusipsiMS0
Field CA1 of hippocampus layer stratum radiatum non-principal cellsipsiCA1L5srnpc1
Field CA1 of hippocampus layer stratum radiatum retrohippocampal neuronsipsiCA1L5srrhn-0.5
Subiculum dorsal partipsiSd-0.5
Retrosplenial dysgranular cortexipsiRSdys1

Input from

NameSideAbbr.WeightDetails
Hilus of the dentate gyruscontraHil3
Field CA3 of hippocampus layer stratum pyramidalecontraCA3pyr3
Field CA3 of hippocampus granule cellscontraCA3Lgc3
Entorhinal cortexcontraEnt-0.5
Lateral entorhinal cortexcontraLEnt-0.5
Medial entorhinal cortexcontraMEnt-0.5
Locus coeruleusipsiLC-0.5
Raphe nucleiipsiRAN3
Median raphe nucleusipsiMnR3
Magnocellular basal forebrain neuronal complexipsiMBFNC-0.5
Medial septum dorsal band complexipsiMSDB2
Nucleus of the vertical limb of the diagonal bandipsiVDB1
Medial septal nucleusipsiMS1
Medial septum dorsal band complex type 1 axon cellsipsiMSDBt1ac2
Reuniens thalamic nucleusipsiRe3
Reuniens thalamic nucleus laterodorsal partipsiReLD3
Anterior basolateral nucleusipsiBLA-0.5
Posterior basolateral nucleusipsiBLP-0.5
Basomedial amygdaloid nucleusipsiBM-0.5
Lateral amygdaloid nucleusipsiLA-0.5
Ventromedial part of the lateral nucleusipsiLaVM4
Central amygdaloid nucleusipsiCe-0.5
Field CA1 of hippocampus layer stratum radiatum retrohippocampal neuronsipsiCA1L5srrhn-0.5
Border CA1 lacunosum-moleculare with L5 stratum radiatumipsiCA1Lb-0.5
Field CA2 of hippocampus layer stratum pyramidale secondary axon of pyramidal cellsipsiCA2L3sapy0
Field CA3a of hippocampus pyramidal cell layer secondary axon of pyramidal cellsipsiCA3aLsapyc0
Entorhinal cortexipsiEnt3
Lateral entorhinal cortexipsiLEnt1
Medial entorhinal cortexipsiMEnt3
Medial entorhinal cortex layer 2ipsiMEntLyL23
Medial entorhinal cortex layer 2 stellate neuronsipsiMEntLyL2st1
Medial entorhinal cortex layer 2 pyramidal like cellsipsiMEntLyL2pyL1
Medial entorhinal cortex layer 2 multipolar cellsipsiMEntLyL2mpc1
Medial entorhinal cortex layer 3ipsiMEntLyL33
Medial entorhinal cortex layer 3 pyramidal neurons type 1ipsiMEntLyL3pyT13
Medial entorhinal cortex layer 3 pyramidal neurons type 2ipsiMEntLyL3pyT23
Medial entorhinal cortex layer 3 multipolar cellsipsiMEntLyL3mpc3
Entorhinal cortex layer 3ipsiEntL3-0.5
Entorhinal cortex layer 3 stellate cellsipsiEntL3SC-0.5
Entorhinal cortex layer 3 pyramidal cellsipsiEntL3py-0.5
Entorhinal cortex layer 2 stellate cellsipsiEntL2SC-0.5
Entorhinal cortex layer 2 pyramidal cellsipsiEntL2py-0.5
Septal regionipsiSER1

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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