University of Rostock

Department of Anatomy

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Rat connectome



Deep mesencephalic nucleus intermediate left


Abbreviation
DpMei
Color       
Superior regionsDeep mesencephalic nucleus

SynonymsAbbr.Language
Deep mesencephalic nucleus intermediateDpMeiEng

Output to

NameSideAbbr.WeightDetails
Substantia nigra compact partipsiSNC1
Lateral thalamic nuclear groupipsiLTNG1
Medial globus pallidusipsiMGP1
Medial striatumipsiCPum1

Input from

NameSideAbbr.WeightDetails
Dorsolateral periaqueductal grayipsiDLPAG2.5
Periaqueductal gray dorsal partipsiPAGd2
Ventral periaqueductal grayipsiVPAG2
Superior colliculus mediolateral partipsiSCmL2
Substantia nigra compact part dorsal tier lateral subsivisionipsiSNCDl2
Substantia nigra reticular part dorsolateral tieripsiSNRDL2
Ventral tegmental nucleusipsiVTg2
Mesencephalic reticular formation caudal partipsiMRFc1
Lateral reticular nucleusipsiLRt1
Medial subnucleus reticularis ventralisipsiMSRV2
Area postremaipsiAP1
Principal sensory trigeminal nucleusipsiPr52
Spinal trigeminal nucleus caudal partipsiSp5C2
Spinal trigeminal nucleus intermediate partipsiSp5nci2
Spinal trigeminal nucleus interpolar part rostralipsiSp5Ir-0.5
Spinal trigeminal nucleus oral partipsiSp5O2
Ventral cochlear nucleusipsiVC1
Nucleus of the solitary tractipsiSol1
Superior oliveipsiSuOLi2
Lateral hypothalamic area caudal partipsiLHc1
Lateral hypothalamic area medial partipsiLHAm1
Zona incerta mediolateral extendipsiZIml3
Medial globus pallidusipsiMGP1
Subthalamic nucleusipsiSTh0
Motoric regions layer 5ipsiMRL51
Primary somatosensory cortex caudal partipsiS1c1
Primary somatosensory cortex middle partipsiS1m1
Sensory regions rostral partipsiSRro1
Secondary visual cortex lateral area layer 5ipsiV2LL51
Spinal cord layer 6 C1ipsiSCL6C12
Spinal cord layer 7 C1ipsiSCL7C12
Spinal cord layer 6 C2ipsiSCL6C22
Spinal cord layer 7 C2ipsiSCL7C22
Spinal cord layer 6 C3ipsiSCL6C32
Spinal cord layer 7 C3ipsiSCL7C32
Substantia nigra compact part dorsal tier lateral subsivisioncontraSNCDl2
Substantia nigra reticular part dorsolateral tiercontraSNRDL2
Ventral tegmental nucleuscontraVTg2
Lateral cerebellar nucleuscontraCERL2
Lateral cerebellar nucleus lateral partcontraCERLL-0.5
Deep mesencephalic nucleuscontraDpMe2
Medial subnucleus reticularis ventraliscontraMSRV2
Principal sensory trigeminal nucleuscontraPr52
Spinal trigeminal nucleus caudal partcontraSp5C2
Spinal trigeminal nucleus intermediate partcontraSp5nci2
Spinal trigeminal nucleus oral partcontraSp5O2
Cuneate nucleuscontraCu1
Gracile nucleus principal partcontraGr1
Spinal cord layer 6 C1contraSCL6C12
Spinal cord layer 1 C1contraSCL1C12
Spinal cord layer 6 C2contraSCL6C22
Spinal cord layer 1 C2contraSCL1C22
Spinal cord layer 6 C3contraSCL6C32
Spinal cord layer 1 C3contraSCL1C32

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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