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Rat connectome

Secondary visual cortex lateral area layer 5 left

Abbreviation	V2LL5
Color
Superior regions	Secondary visual cortex lateral area infragranular layers

Synonyms	Abbr.	Language
Secondary visual cortex lateral area layer 5	V2LL5

Subregions	Side
Secondary visual cortex lateral area layer 5a	left
Secondary visual cortex lateral area layer 5c	left
Secondary visual cortex lateral area layer 5b	left
Secondary visual cortex lateral area layer 5 pyramidal cells	left
Secondary visual cortex lateral area layer 5 non-pyramidal cells	left

Output to

Name	Side	Abbr.	Weight
Superior colliculus	ipsi	SC	2.5
Superior colliculus superficial layers	ipsi	SCs	3
Superior colliculus medial part	ipsi	mSC	3
Supericial layers of the rostromedial superior colliculus	ipsi	SCsRML	-0.5
Tegmental area	ipsi	TGA	0
Reticulotegmental nucleus	ipsi	RETn	0
Pontine nuclei	ipsi	Pn	1
Deep mesencephalic nucleus intermediate	ipsi	DpMei	1
Deep mesencephalic nucleus lateral part	ipsi	DpMeL	1
Deep mesencephalic nucleus medial part	ipsi	DpMeM	1
Anterior group of the dorsal thalamus	ipsi	ATN	3
Ventrolateral thalamic nucleus	ipsi	VL	3
Ventrobasal complex	ipsi	VB	3
Ventrobasal complex posterior part	ipsi	VBp	3
Lateral posterior thalamic nucleus	ipsi	LP	3
Corpus callosum	ipsi	cc	-2
Dorsal region of caudal two thirds of the striatum	ipsi	CPuDctt	3
Rostral part of dorsal anterior cingulate cortex	ipsi	DACCR	2
Rostrocaudal extent of the dorsal anterior cingulate cortex superficial layers	ipsi	DACCrcsL	2
Frontal association cortex	ipsi	FrA	-0.5
Frontal cortex area 1 superficial layers	ipsi	Fr1sL	1.5
Frontal cortex area 2 rostral part	ipsi	Fr2R	4
Frontal cortex area 2 rostrocaudal extent superficial layers	ipsi	Fr2rcsL	3
Parietal cortex posterior area dorsal part	ipsi	ParPD	1
Temporal association area 2 dorsal part	ipsi	Te2D	-0.5
Perirhinal cortex	ipsi	A35	3
Posterior part of the medial agranular prefrontal cortex	ipsi	PoAGm	3
Ventral prefrontal cortex superficial layers	ipsi	VPFCsL	3
Area 17 area 18a border region	ipsi	VR1B2a	2
Primary visual cortex	ipsi	V1	3
Primary visual cortex layer 1	ipsi	V1L1	2
Primary visual cortex layer 2	ipsi	V1L2	2
Primary visual cortex layer 3	ipsi	V1L3	2
Primary visual cortex layer 4	ipsi	V1L4	2
Primary visual cortex layer 5	ipsi	V1L5	2
Secondary visual cortex	ipsi	V2	-0.5
Secondary visual cortex medial area supragranular layers	ipsi	V2MsgL	2
Secondary visual cortex medial area deep gray matter layers	ipsi	V2MdL	1
Secondary visual cortex lateral area supragranular layers	ipsi	V2LsgL	1
Secondary visual cortex lateral area infragranular layers	ipsi	V2LigL	1
Ventral part of the lateral orbital cortex superficial layers layers	ipsi	VeLOsL	3
Ventral part of the ventrolateral orbital area superficial layers	ipsi	VVLOsL	3
Dorsal geniculate nucleus lateral part	ipsi	DLGl	3
Lateral geniculate complex	ipsi	LG	3
Ventral lateral geniculate nucleus	ipsi	VLG	3
Medial geniculate nucleus	ipsi	MG	3
Pyramidal tract	ipsi	py	0
Superior colliculus superficial layers	contra	SCs	0
Pontine nuclei	contra	Pn	1
Rostral part of dorsal anterior cingulate cortex	contra	DACCR	1
Rostrocaudal extent of the dorsal anterior cingulate cortex superficial layers	contra	DACCrcsL	1
Frontal cortex area 1 superficial layers	contra	Fr1sL	1
Frontal cortex area 2 rostral part	contra	Fr2R	2
Frontal cortex area 2 rostrocaudal extent superficial layers	contra	Fr2rcsL	1.5
Parietal cortex posterior area dorsal part	contra	ParPD	-0.5
Ventral prefrontal cortex superficial layers	contra	VPFCsL	1.5
Area 17 area 18a border region	contra	VR1B2a	3
Primary visual cortex	contra	V1	2
Primary visual cortex layer 1	contra	V1L1	1
Primary visual cortex layer 2	contra	V1L2	1
Primary visual cortex layer 3	contra	V1L3	1
Primary visual cortex layer 4	contra	V1L4	1
Primary visual cortex deep layers	contra	V1dL	1
Primary visual cortex layer 5	contra	V1L5	1
Secondary visual cortex lateral area	contra	V2L	4
Secondary visual cortex lateral area supragranular layers	contra	V2LsgL	1
Ventral part of the lateral orbital cortex superficial layers layers	contra	VeLOsL	1.5
Ventral part of the ventrolateral orbital area superficial layers	contra	VVLOsL	1.5

Input from

Name	Side	Abbr.	Weight
Basal forebrain	ipsi	BAF	3
Nucleus of the horizontal limb of the diagonal band	ipsi	HDB	3
Genu of diagonal band of Broca	ipsi	GDBB	2
Subpallidal substantia innominata	ipsi	SIsp	2
Magnocellular preoptic nucleus lateral part	ipsi	MCPOL	2
Anteromedial thalamic nucleus rostral part	ipsi	AMr	1
Interoanteromedial thalamic nucleus	ipsi	IAM	1
Lateral posterior thalamic nucleus	ipsi	LP	-0.5
Claustrum	ipsi	Cl	3
Globus pallidus	ipsi	GP	2
Posterior part of the medial agranular prefrontal cortex	ipsi	PoAGm	3
Primary visual cortex	ipsi	V1	-1
Primary visual cortex layer 1	ipsi	V1L1	1.5
Primary visual cortex deeper half of layers 2 3	ipsi	V1L23d	-0.5
Primary visual cortex layer 5 a	ipsi	V1L5a	1.5
Primary visual cortex white matter	ipsi	V1WM	3
Secondary visual cortex medial area	ipsi	V2M	-1
Secondary visual cortex lateral area	ipsi	V2L	2
Ventrolateral orbital area	ipsi	VLO	0.5
Area 17 area 18a border region	contra	VR1B2a	3
Primary visual cortex lateral part	contra	V1La	-0.5

Key for weights

Value	Weight
-3	unknown
-2	fibers of passage
-1	not clear
-0.5	exists
0	not present
0.5	very light
1	light / sparse
1.5	light / moderate
2	moderate / dense
2.5	moderate / strong
3	strong
4	very strong