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Rat connectome



Spinal trigeminal nucleus caudal part right


Abbreviation
Sp5C
Color       
Superior regionsSpinal trigeminal nucleus

SynonymsAbbr.Language
Spinal trigeminal nucleus caudal partSp5CEng
 SPVC 
Caudal division of the spinal trigeminal nucleus Eng
Spinal trigeminal nucleus caudalis Eng
Medullary dorsal horn Eng
Spinal trigeminal nucleus caudal division Eng
Caudal subnucleus of the spinal trigeminal nucleus Eng
Subnucleus caudalis of the trigeminal nucleus Eng
Nucleus tractus spinalis nervi trigemini caudalis Eng
Trigeminal spinal caudal subnucleus Eng
 5cEng
Trigeminal spinal subnucleus caudalis  

SubregionsSide
Caudal part of the spinal trigeminal nucleus caudal partright
Deep spinal trigeminal nucleus caudal partright
Intermediate part of the spinal trigeminal nucleus caudal partright
Spinal trigeminal nucleus caudal part central partright
Spinal trigeminal nucleus caudal part dorsal divisionright
Spinal trigeminal nucleus caudal part dorsolateral partright
Spinal trigeminal nucleus caudal part dorsomedial partright
Spinal trigeminal nucleus caudal part dorsoventral middleright
Spinal trigeminal nucleus caudal part lateral partright
Spinal trigeminal nucleus caudal part layersright
Spinal trigeminal nucleus caudal part magnocellular layerright
Spinal trigeminal nucleus caudal part medial partright
Spinal trigeminal nucleus caudal part rostral partright
Spinal trigeminal nucleus caudal part ventral partright
Spinal trigeminal nucleus caudal part ventromedial partright
Marginal part of the caudal spinal trigeminal nucleusright
Superficial spinal trigeminal nucleus caudal partright
Caudal spinal trigeminal nucleus rostrodorsal partright
Subnucleus zonalis of the spinal trigeminal nucleus pars caudalisright
External portion of the caudal nucleus of the trigeminal nerveright
Ventrolateral part of the spinal trigeminal nucleus caudal partright
Spinal trigeminal nucleus caudal part rostrocaudal extentright
Spinal trigeminal nucleus caudal part layers 2 to 5right
Spinal trigeminal nucleus caudal part layers 3 4 5right

Output to

NameSideAbbr.WeightDetails
Nuclei of the lateral lemniscuscontraNLL0.5
Lateral paralemniscal nucleuscontraLPL0
Superior colliculuscontraSC1.5
Superior colliculus lateral partcontraSCL1
Superior colliculus deep white layer lateral partcontraSAPL2
Superior colliculus intermediate white layer lateral partcontraSAIL3
Anterior two-thirds of superior colliculus intermediate layerscontraASCitt-0.5
Lateral part of the stratum griseum intermediale of the superior colliculuscontraSCiL3
Deep gray layer of the lateral superior colliculuscontraDpLG2
Central tegmental field dorsal partcontraTGACd0
Laterodorsal tegmental nucleuscontraLDTg1
Dorsal tegmental nucleuscontraDTg0
Pedunculopontine tegmental nucleuscontraPPTg1
Cortical regions of the lateral part of the posterior lobe of the cerebellumcontraCERCPLL1
A5 noradrenaline cellscontraA5-0.5
Intermediate reticular nucleuscontraIRt1
Deep mesencephalic nucleuscontraDpMe-0.5
Deep mesencephalic nucleus intermediatecontraDpMei2
Deep mesencephalic nucleus lateral partcontraDpMeL2
Deep mesencephalic nucleus medial partcontraDpMeM2
Pontine reticular nucleus oral partcontraPnO0.5
Pontine reticular nucleus caudal partcontraPNC0.5
Parabrachial nucleuscontraPB3
Koelliker Fuse nucleuscontraKF1
Lateral parabrachial nucleuscontraLPB0.5
Parabrachial nucleus medialcontraPBnMe-0.5
Gigantocellular reticular nucleuscontraGi0.5
Medullary reticular nucleus dorsal partcontraMdDd1
Ventral medullary reticular formationcontraVMurF0.5
Parvicellular reticular nucleuscontraPCRt1
Parvicellular reticular nucleus alpha partcontraPCRtA1
Subcoeruleus nucleuscontraSubC0.5
Boetzinger complexcontraBo0
Hypoglossal motor nucleuscontra12M-0.5
Midline part of the hypoglossal nucleuscontra12SMM-0.5
Hypoglossal nucleus ventral partcontra12SV-0.5
Hypoglossal nucleus rostral partcontra12Sr-0.5
Dorsal part of the hypoglossal nucleuscontra12SD-0.5
Caudal part of the hypoglossal nucleuscontra12SC-0.5
Mesencephalic trigeminal nucleuscontraMe51
Motor trigeminal nucleus dorsolateral partcontraMo5DL1
Motor trigeminal nucleus ventromedial partcontraMo5VM1
Principal sensory trigeminal nucleuscontraPr51
Spinal trigeminal nucleus caudal part dorsomedial partcontraSp5CDM2
Spinal trigeminal nucleus caudal part layer 1contraSp5CaL11
Ventrolateral part of the spinal trigeminal nucleus caudal partcontraSp5CvL3
Cochlear nucleuscontraCON1
Lateral vestibular nucleus ventral partcontraLVeV1
Nucleus of the solitary tractcontraSol0
Nucleus of the solitary tract commissural partcontraSolC2
Caudoventral respiratory groupcontraCVRG0
Ventral respiratory groupcontraVReG-0.5
Anterior part of the rostral part of the inferior olive dorsal nucleuscontraIODRA-0.5
Dorsomedial part of the rostral part of the inferior olive dorsal nucleuscontraIODRDM-0.5
Inferior olive medial nucleuscontraIOM3
Inferior olive principal nucleuscontraIOPr3
Rostral ventral respiratory groupcontraRVRG0
Lateral hypothalamic areacontraLH3
Medial division of the hypothalamuscontraMdH1
Posterior hypothalamic areacontraPHA3
Anterior group of the dorsal thalamuscontraATN0.5
Central medial thalamic nucleuscontraCM1
Centrolateral thalamic nucleuscontraCL1
Gelatinosus thalamic nucleuscontraG-0.5
Parafascicular thalamic nucleuscontraPF0.5
Lateral anterior nucleus of the dorsal thalamuscontraLAAT0.5
Posterior thalamic nuclear groupcontraPo2
Mediodorsal thalamic nucleuscontraMD0.5
Submedius thalamic nucleuscontraSub3
Ventro anterior thalamic nucleuscontraVA0.5
Ventrolateral thalamic nucleuscontraVL0.5
Ventral posterior thalamic complexcontraVPT1
Ventral posterior thalamic complex lateral partcontraVPTL1
Ventral posterior thalamic complex medial partcontraVPTm3
Ventral posterior thalamic nucleus parvicellular partcontraVPPC3
Ventrobasal complexcontraVB0.5
Ventral posteromedial thalamic nucleuscontraVPM2
Ventral posteromedial thalamic nucleus corecontraVPMc3
Ventrobasal complex medial partcontraVBM1
Intralaminar nucleicontraILN2
Lateral posterior thalamic nucleuscontraLP0.5
Laterodorsal thalamic nucleuscontraLD0.5
Posterior groupcontraPTG3
Posteromedial thalamic nucleuscontraPMTN0.5
Zona incerta ventral partcontraZIV3
Pretectal regioncontraPRT0.5
Anterior pretectal nucleuscontraAPT0
Medial lemniscuscontraml-0.5
Medial geniculate nucleus medial partcontraMGM2
Dorsal horn of spinal cordcontraDHMES1
Lamina 1 of dorsal horn of spinal cordcontrasDHMESL1-0.5
Lamina 2 of dorsal horn of spinal cordcontrasDHMESL2-0.5
Dorsal horn C1contraDHC1-0.5
Spinal cord layer 5 C1contraSCL5C1-0.5
Spinal cord layer 3 C1contraSCL3C1-0.5
Spinal cord layer 4 C1contraSCL4C1-0.5
Spinal cord layer 1 C1contraSCL1C1-0.5
Spinal cord layer 2 C1contraSCL2C11
Dorsal horn C2contraDHC2-0.5
Spinal cord layer 5 C2contraSCL5C2-0.5
Spinal cord layer 3 C2contraSCL3C2-0.5
Spinal cord layer 4 C2contraSCL4C2-0.5
Spinal cord layer 1 C2contraSCL1C2-0.5
Spinal cord layer 2 C2contraSCL2C21
Dorsal horn C3contraDHC3-0.5
Spinal cord layer 5 C3contraSCL5C3-0.5
Spinal cord layer 3 C3contraSCL3C3-0.5
Spinal cord layer 4 C3contraSCL4C3-0.5
Spinal cord layer 1 C3contraSCL1C3-0.5
Spinal cord layer 2 C3contraSCL2C31
Spinal cord layer 5 C4contraSCL5C40
Spinal cord layer 3 C4contraSCL3C40
Spinal cord layer 4 C4contraSCL4C40
Spinal cord layer 1 C4contraSCL1C40
Spinal cord layer 2 C4contraSCL2C40
Spinal cord layer 5 C5contraSCL5C50
Spinal cord layer 3 C5contraSCL3C50
Spinal cord layer 4 C5contraSCL4C50
Spinal cord layer 1 C5contraSCL1C50
Spinal cord layer 2 C5contraSCL2C50
Spinal cord layer 5 C6contraSCL5C60
Spinal cord layer 3 C6contraSCL3C60
Spinal cord layer 4 C6contraSCL4C60
Spinal cord layer 1 C6contraSCL1C60
Spinal cord layer 2 C6contraSCL2C60
Spinal cord layer 5 C7contraSCL5C70
Spinal cord layer 3 C7contraSCL3C70
Spinal cord layer 4 C7contraSCL4C70
Spinal cord layer 1 C7contraSCL1C70
Spinal cord layer 2 C7contraSCL2C70
Ventrolateral ophthalmic region of the cervical dorsal horncontraCSegDVLO3
Dorsomedial mandibular region of the cervical dorsal horncontraCSegDdm2
Maxillary region of the cervical dorsal horncontraCSegDMx1
Thoracal segment 3contraT30.5
Thoracal segment 5contraT50.5
Thoracal segment 6contraT60.5
Thoracal segment 10contraT100.5
Thoracal segment 12contraT120.5
Intermediomedial cell column L1contraIMML11
Intermediomedial cell column L2contraIMML21
Intermediomedial cell column L3contraIMML31
Intermediomedial cell column L4contraIMML41
Intermediomedial cell column L5contraIMML51
Intermediomedial cell column L6contraIMML61
Nuclei of the lateral lemniscusipsiNLL0.5
Superior colliculusipsiSC1
Superior colliculus lateral partipsiSCL1
Superior colliculus superficial layersipsiSCs1
Superior colliculus intermediate and deep layersipsiSCidLa-0.5
Superior colliculus deep layersipsiSCd1
Central tegmental field dorsal partipsiTGACd0
Laterodorsal tegmental nucleusipsiLDTg1
Dorsal tegmental nucleusipsiDTg0
Pedunculopontine tegmental nucleusipsiPPTg1
Cerebellar cortexipsiCERC2
Paraflocculus ventral partipsiPFlv0.5
Posterior lobe of the cerebellumipsiCERCPL2
Ansiform lobule crus 1ipsiCrus11
Ansiform lobule crus 2ipsiCrus20
Cortical regions of the lateral part of the posterior lobe of the cerebellumipsiCERCPLL0.5
Paramedian lobuleipsiPM0
Simple lobuleipsiSim1
Anterior lobeipsiAnL0.5
Cerebellar lobule 2a zone D0ipsiCERL2aD0-0.5
Cerebellar lobule 2a zone D1ipsiCERL2aD1-0.5
Cerebellar lobule 2a zone D2ipsiCERL2aD2-0.5
Cerebellar lobule 2a zone C3ipsiCERL2aC3-0.5
Cerebellar lobule 2b zone D0ipsiCERL2bD0-0.5
Cerebellar lobule 2b zone D1ipsiCERL2bD1-0.5
Cerebellar lobule 2b zone D2ipsiCERL2bD2-0.5
Cerebellar lobule 2b zone C3ipsiCERL2bC3-0.5
Cerebellar lobule 3a zone D0ipsiCERL3aD0-0.5
Cerebellar lobule 3a zone D1ipsiCERL3aD1-0.5
Cerebellar lobule 3a zone D2ipsiCERL3aD2-0.5
Cerebellar lobule 3a zone C3ipsiCERL3aC3-0.5
Cerebellar lobule 3b zone D0ipsiCERL3bD0-0.5
Cerebellar lobule 3b zone D1ipsiCERL3bD1-0.5
Cerebellar lobule 3b zone D2ipsiCERL3bD2-0.5
Cerebellar lobule 3b zone C3ipsiCERL3bC3-0.5
Cerebellar lobule 1 zone C3ipsiCERL1C3-0.5
Cerebellar lobule 1 zone D0ipsiCERL1D0-0.5
Cerebellar lobule 1 zone D1ipsiCERL1D1-0.5
Cerebellar lobule 1 zone D2ipsiCERL1D2-0.5
Cerebellar lobule 4 zone D0ipsiCERL4D0-0.5
Cerebellar lobule 4 zone D1ipsiCERL4D1-0.5
Cerebellar lobule 4 zone D2ipsiCERL4D2-0.5
Cerebellar lobule 4 zone C3ipsiCERL4C3-0.5
Cerebellar lobule 5ipsiCERL51
Cerebellar lobule 5 zone D0ipsiCERL5D0-0.5
Cerebellar lobule 5 zone D1ipsiCERL5D1-0.5
Cerebellar lobule 5 zone D2ipsiCERL5D2-0.5
Cerebellar lobule 5 zone C3ipsiCERL5C3-0.5
Cerebellar lobule 7ipsiCERL70
Cerebellar lobule 7aipsiCERL7a0
Cerebellar lobule 7a zone C3ipsiCERL7aC3-0.5
Cerebellar lobule 7a zone D0ipsiCERL7aD0-0.5
Cerebellar lobule 7a zone D1ipsiCERL7aD1-0.5
Cerebellar lobule 7a zone D2ipsiCERL7aD21
Cerebellar lobule 7bipsiCERL7b0
Cerebellar lobule 7b zone C3ipsiCERL7bC3-0.5
Cerebellar lobule 7b zone D0ipsiCERL7bD0-0.5
Cerebellar lobule 7b zone D1ipsiCERL7bD1-0.5
Cerebellar lobule 7b zone D2ipsiCERL7bD21
Cerebellar lobule 8 zone C3ipsiCERL8C3-0.5
Cerebellar lobule 8 zone D0ipsiCERL8D0-0.5
Cerebellar lobule 8 zone D1ipsiCERL8D1-0.5
Cerebellar lobule 8 zone D2ipsiCERL8D21
Intermediate part of cerebellar lobule 8ipsiCERL8i-0.5
Cerebellar lobule 9ipsiCERL90
Cerebellar lobule 9a zone AipsiCERL9aA3
Cerebellar lobule 9a zone C1ipsiCERL9aC1-0.5
Cerebellar lobule 9a zone C2ipsiCERL9aC2-0.5
Cerebellar lobule 9a zone C3ipsiCERL9aC3-0.5
Cerebellar lobule 9a zone D0ipsiCERL9aD0-0.5
Cerebellar lobule 9a zone D1ipsiCERL9aD1-0.5
Cerebellar lobule 9a zone D2ipsiCERL9aD21
Cerebellar lobule 9a zone XipsiCERL9aX3
Cerebellar lobule 9b zone AipsiCERL9bA3
Cerebellar lobule 9b zone C1ipsiCERL9bC1-0.5
Cerebellar lobule 9b zone C2ipsiCERL9bC2-0.5
Cerebellar lobule 9b zone C3ipsiCERL9bC3-0.5
Cerebellar lobule 9b zone D0ipsiCERL9bD0-0.5
Cerebellar lobule 9b zone D1ipsiCERL9bD1-0.5
Cerebellar lobule 9b zone D2ipsiCERL9bD21
Cerebellar lobule 9b zone XipsiCERL9bX3
Cerebellar lobule 9c zone AipsiCERL9cA3
Cerebellar lobule 9c zone C1ipsiCERL9cC1-0.5
Cerebellar lobule 9c zone C2ipsiCERL9cC2-0.5
Cerebellar lobule 9c zone C3ipsiCERL9cC3-0.5
Cerebellar lobule 9c zone D0ipsiCERL9cD0-0.5
Cerebellar lobule 9c zone D1ipsiCERL9cD1-0.5
Cerebellar lobule 9c zone D2ipsiCERL9cD21
Cerebellar lobule 9c zone XipsiCERL9cX3
Cerebellar lobule 10ipsiCERL100
Cerebellar lobule 10b zone C1ipsiCERL10bC1-0.5
Cerebellar lobule 10b zone C2ipsiCERL10bC2-0.5
Cerebellar lobule 10b zone C3ipsiCERL10bC3-0.5
Cerebellar lobule 10b zone D0ipsiCERL10bD0-0.5
Cerebellar lobule 10b zone D1ipsiCERL10bD1-0.5
Cerebellar lobule 10b zone D2ipsiCERL10bD2-0.5
Cerebellar lobule 10b zone XipsiCERL10bX3
Cerebellar lobule 10a zone C1ipsiCERL10aC1-0.5
Cerebellar lobule 10a zone C2ipsiCERL10aC2-0.5
Cerebellar lobule 10a zone C3ipsiCERL10aC3-0.5
Cerebellar lobule 10a zone D0ipsiCERL10aD0-0.5
Cerebellar lobule 10a zone D1ipsiCERL10aD1-0.5
Cerebellar lobule 10a zone D2ipsiCERL10aD2-0.5
Cerebellar lobule 10a zone XipsiCERL10aX3
Cerebellar lobule 6ipsiCERL60
Cerebellar lobule 6aipsiCERL6a0
Cerebellar lobule 6a zone D0ipsiCERL6aD0-0.5
Cerebellar lobule 6a zone D1ipsiCERL6aD1-0.5
Cerebellar lobule 6a zone D2ipsiCERL6aD21
Cerebellar lobule 6a zone C3ipsiCERL6aC3-0.5
Cerebellar lobule 6bipsiCERL6b0
Cerebellar lobule 6b zone C3ipsiCERL6bC3-0.5
Cerebellar lobule 6b zone D0ipsiCERL6bD0-0.5
Cerebellar lobule 6b zone D1ipsiCERL6bD1-0.5
Cerebellar lobule 6b zone D2ipsiCERL6bD21
Cerebellar lobule 6cipsiCERL6c0
Cerebellar lobule 6c zone C3ipsiCERL6cC3-0.5
Cerebellar lobule 6c zone D0ipsiCERL6cD0-0.5
Cerebellar lobule 6c zone D1ipsiCERL6cD1-0.5
Cerebellar lobule 6c zone D2ipsiCERL6cD21
Cerebellar lobule 6dipsiCERL6d0
Cerebellar lobule 6d zone C3ipsiCERL6dC3-0.5
Cerebellar lobule 6d zone D0ipsiCERL6dD0-0.5
Cerebellar lobule 6d zone D1ipsiCERL6dD1-0.5
Cerebellar lobule 6d zone D2ipsiCERL6dD21
Posterior lobe vermisipsiPLVERM1
Lateral interposed cerebellar nucleusipsiICNL-0.5
FlocculusipsiFl0.5
A5 noradrenaline cellsipsiA52
Locus coeruleusipsiLC-0.5
Reticular systemipsiRF1
Intermediate reticular nucleusipsiIRt2
Mesopontine reticular formationipsiMPRF1
Deep mesencephalic nucleusipsiDpMe-0.5
Deep mesencephalic nucleus intermediateipsiDpMei2
Deep mesencephalic nucleus lateral partipsiDpMeL2
Deep mesencephalic nucleus medial partipsiDpMeM2
Pontine reticular nucleus oral partipsiPnO1
Pontine reticular nucleus caudal partipsiPNC1.5
Parabrachial nucleusipsiPB3
Koelliker Fuse nucleusipsiKF3
Lateral parabrachial nucleusipsiLPB3
Lateral parabrachial nucleus dorsal partipsiLPBD-0.5
Parabrachial nucleus central lateral partipsiPBCeL-0.5
Parabrachial nucleus external divison lateral partipsiPBeDL-0.5
Parabrachial nucleus medialipsiPBnMe-0.5
Gigantocellular reticular nucleusipsiGi0.5
Medullary reticular nucleusipsiMdD3
Medullary reticular nucleus dorsal partipsiMdDd2
Ventral medullary reticular formationipsiVMurF1
Parvicellular reticular nucleusipsiPCRt2
Parvicellular reticular nucleus alpha partipsiPCRtA3
Subcoeruleus nucleusipsiSubC1
Subcoeruleus nucleus ventral partipsiSubCV1.5
Boetzinger complexipsiBo0
Facial nucleusipsi72
Facial nucleus dorsolateral subnucleusipsi7DL3
Facial nucleus intermediate partipsi7i2
Facial nucleus lateral subnucleusipsi7L3
Facial nucleus medial partipsi7M3
Facial nucleus rostrocaudal extentipsi7rce-0.5
Facial nucleus ventromedial subnucleusipsi7VM1
Facial nucleus dorsal intermediate subnucleusipsi7DI3
Hypoglossal nucleusipsi12S3
Hypoglossal motor nucleusipsi12M-0.5
Midline part of the hypoglossal nucleusipsi12SMM1
Hypoglossal nucleus ventral partipsi12SV3
Hypoglossal nucleus rostral partipsi12Sr1
Hypoglossal nucleus central partipsi12SCe-0.5
Dorsal part of the hypoglossal nucleusipsi12SD3
Caudal part of the hypoglossal nucleusipsi12SC1
Supratrigeminal nucleusipsiSu53
Mesencephalic trigeminal nucleusipsiMe51
Motor trigeminal nucleus dorsolateral partipsiMo5DL3
Motor trigeminal nucleus ventromedial partipsiMo5VM1
Principal sensory trigeminal nucleusipsiPr53
Principal sensory trigeminal nucleus ventral partipsiPr5v-0.5
Spinal trigeminal nucleus caudal part layer 5ipsiSp5CaL5-0.5
Spinal trigeminal nucleus interpolar partipsiSp5I3
Spinal trigeminal nucleus interpolar part dorsal partipsiSp5ID-0.5
Spinal trigeminal nucleus oral partipsiSp5O-0.5
Cochlear nucleusipsiCON3
Dorsal cochlear nucleus deep coreipsiDCDp-0.5
Dorsal cochlear nucleus layer 2 granular cellsipsiDCGr-0.5
Superior vestibular nucleus ventral partipsiSuVeV0
Lateral vestibular nucleus dorsal partipsiLVeD0
Lateral vestibular nucleus ventral partipsiLVeV1
Nucleus of the solitary tractipsiSol3
Nucleus of the solitary tract caudal partipsiSolca2
Nucleus of the solitary tract commissural partipsiSolC2
Caudal ventrolateral medullaipsiCVLM1
Rostral ventrolateral medullaipsiRVLM1
Caudoventral respiratory groupipsiCVRG0.5
Cuneate nucleusipsiCu1
Inferior olive principal nucleusipsiIOPr1
Rostral ventral respiratory groupipsiRVRG0
Lateral hypothalamic areaipsiLH1
Medial division of the hypothalamusipsiMdH0.5
Posterior hypothalamic areaipsiPHA0.5
ThalamusipsiT1
Anterior group of the dorsal thalamusipsiATN0.5
Anteroventral thalamic nucleusipsiAV0
Central medial thalamic nucleusipsiCM0
Centrolateral thalamic nucleusipsiCL0.5
Gelatinosus thalamic nucleusipsiG-0.5
Paracentral thalamic nucleus caudal partipsiPC-c0
Paracentral thalamic nucleus rostral partipsiPC-r0
Parafascicular thalamic nucleusipsiPF0.5
Parafascicular thalamic nucleus lateral partipsiPFL2
Parafascicular thalamic nucleus medial partipsiPFM2
Rhomboid thalamic nucleusipsiRh0
Lateral anterior nucleus of the dorsal thalamusipsiLAAT0.5
Posterior thalamic nuclear groupipsiPo1
Mediodorsal thalamic nucleusipsiMD0.5
Intermediodorsal thalamic nucleusipsiIMD0
Submedius thalamic nucleusipsiSub1
Paratenial thalamic nucleusipsiPT0
Paraventricular thalamic nucleus anterior partipsiPVA0
Paraventricular thalamic nucleus medial partipsiPVM0
Paraventricular thalamic nucleus posterior partipsiPVP0
Reuniens thalamic nucleusipsiRe1
Ventro anterior thalamic nucleusipsiVA0.5
Ventrolateral thalamic nucleusipsiVL2
Ventral posterior thalamic complex medial partipsiVPTm1
Ventral posterior thalamic nucleus parvicellular partipsiVPPC3
Ventrobasal complexipsiVB1
Ventral posterolateral thalamic nucleusipsiVPL3
Ventral posterolateral thalamic nucleus medial partipsiVPLM2
Ventral posteromedial thalamic nucleusipsiVPM3
Ventromedial thalamic nucleus caudal partipsiVMc2
Intralaminar nucleiipsiILN1
Lateral posterior thalamic nucleusipsiLP0.5
Laterodorsal thalamic nucleusipsiLD0.5
Oval paracentral thalamic nucleusipsiOPC2
Posterior groupipsiPTG1
Posteromedial thalamic nucleusipsiPMTN0.5
Zona incertaipsiZI1
Zona incerta ventral partipsiZIV0.5
Pretectal regionipsiPRT0.5
Anterior pretectal nucleusipsiAPT0
Central amygdaloid nucleusipsiCe0.5
Subthalamic nucleusipsiSTh1
Medial geniculate nucleus medial partipsiMGM0.5
Spinal cordipsiMES-0.5
Cervical segment 1ipsiCS13
Spinal cord layers C1ipsiSCLC12
Spinal cord layer 7 C1ipsiSCL7C1-0.5
Cervical segment 2ipsiCS23
Spinal cord layers C2ipsiSCLC22
Spinal cord layer 7 C2ipsiSCL7C2-0.5
Cervical segment 3ipsiCS3-0.5
Spinal cord layers C3ipsiSCLC32
Spinal cord layer 7 C3ipsiSCL7C3-0.5
Cervical segment 4ipsiCS4-0.5
Intermediomedial cell column C4ipsiIMMC43
Spinal cord layers C4ipsiSCLC42
Spinal cord layer 5 C4ipsiSCL5C42
Spinal cord layer 3 C4ipsiSCL3C42
Spinal cord layer 4 C4ipsiSCL4C42
Spinal cord layer 1 C4ipsiSCL1C42
Spinal cord layer 2 C4ipsiSCL2C42
Spinal cord layer 7 C4ipsiSCL7C4-0.5
Cervical segment 5ipsiCS5-0.5
Intermediomedial cell column C5ipsiIMMC53
Spinal cord layers C5ipsiSCLC52
Spinal cord layer 5 C5ipsiSCL5C52
Spinal cord layer 3 C5ipsiSCL3C52
Spinal cord layer 4 C5ipsiSCL4C52
Spinal cord layer 1 C5ipsiSCL1C52
Spinal cord layer 2 C5ipsiSCL2C52
Spinal cord layer 7 C5ipsiSCL7C5-0.5
Cervical segment 6ipsiCS6-0.5
Spinal cord layers C6ipsiSCLC62
Spinal cord layer 5 C6ipsiSCL5C62
Spinal cord layer 3 C6ipsiSCL3C62
Spinal cord layer 4 C6ipsiSCL4C62
Spinal cord layer 1 C6ipsiSCL1C62
Spinal cord layer 2 C6ipsiSCL2C62
Spinal cord layer 7 C6ipsiSCL7C6-0.5
Cervical segment 7ipsiCS7-0.5
Spinal cord layers C7ipsiSCLC72
Spinal cord layer 5 C7ipsiSCL5C72
Spinal cord layer 3 C7ipsiSCL3C72
Spinal cord layer 4 C7ipsiSCL4C72
Spinal cord layer 1 C7ipsiSCL1C72
Spinal cord layer 2 C7ipsiSCL2C72
Spinal cord layer 7 C7ipsiSCL7C7-0.5
Cervical segment 8ipsiCS8-0.5
Spinal cord layers C8ipsiSCLC82
Spinal cord layer 7 C8ipsiSCL7C8-0.5
Thoracal segment 1ipsiT1-0.5
Spinal cord layer 7 T1ipsiSCL7T1-0.5
Thoracal segment 2ipsiT2-0.5
Spinal cord layer 7 T2ipsiSCL7T2-0.5
Thoracal segment 3ipsiT31
Spinal cord layer 7 T3ipsiSCL7T3-0.5
Thoracal segment 4ipsiT4-0.5
Spinal cord layer 7 T4ipsiSCL7T4-0.5
Thoracal segment 5ipsiT51
Spinal cord layer 7 T5ipsiSCL7T5-0.5
Thoracal segment 6ipsiT61
Spinal cord layer 7 T6ipsiSCL7T6-0.5
Thoracal segment 7ipsiT7-0.5
Spinal cord layer 7 T7ipsiSCL7T7-0.5
Thoracal segment 8ipsiT8-0.5
Spinal cord layer 7 T8ipsiSCL7T8-0.5
Thoracal segment 9ipsiT9-0.5
Spinal cord layer 7 T9ipsiSCL7T9-0.5
Thoracal segment 10ipsiT101
Spinal cord layer 7 T10ipsiSCL7T10-0.5
Thoracal segment 11ipsiT11-0.5
Spinal cord layer 7 T11ipsiSCL7T11-0.5
Thoracal segment 12ipsiT121
Spinal cord layer 7 T12ipsiSCL7T12-0.5
Thoracal segment 13ipsiT13-0.5
Spinal cord layer 7 T13ipsiSCL7T13-0.5
Lumbar segment 1ipsiL1-0.5
Intermediomedial cell column L1ipsiIMML12
Spinal cord layer 7 L1ipsiSCL7L1-0.5
Lumbar segment 2ipsiL2-0.5
Intermediomedial cell column L2ipsiIMML22
Spinal cord layer 7 L2ipsiSCL7L2-0.5
Lumbar segment 3ipsiL3-0.5
Intermediomedial cell column L3ipsiIMML32
Spinal cord layer 7 L3ipsiSCL7L3-0.5
Lumbar segment 4ipsiL4-0.5
Intermediomedial cell column L4ipsiIMML42
Spinal cord layer 7 L4ipsiSCL7L4-0.5
Intermediomedial cell column L5ipsiIMML52
Spinal cord layer 7 L5ipsiSCL7L5-0.5
Intermediomedial cell column L6ipsiIMML62
Spinal cord layer 7 L6ipsiSCL7L6-0.5
Spinal cord layer 7 S1ipsiSCL7S1-0.5
Spinal cord layer 7 S2ipsiSCL7S2-0.5
Spinal cord layer 7 S3ipsiSCL7S3-0.5
Spinal cord layer 7 S4ipsiSCL7S4-0.5
Hypoglossal nervecontra12P1
Sympathetic nervous systemipsiSNS0
Parasympathetic nervous systemipsiPaNS4
Hypoglossal nerveipsi12P2
Infraorbital nerveipsiiobn-2
Adrenal glandipsiADRE-0.5
Submandibular glandipsiOrgsSubg-10
Anterior chamber of the eyeipsiOrgACEye-10
Whisker pads musclesipsiMuscWP-0.5
Gastrocnemius muscleipsiMuscGC-0.5

Input from

NameSideAbbr.WeightDetails
Adventitia of the superior dura sinuscontraasds-0.5
Periaqueductal graycontraPAG2
Dorsolateral periaqueductal graycontraDLPAG2
Dorsolateral periaqueductal gray middle partcontraDLPAGm2
Ventrolateral periaqueductal graycontraVLPAG2
Ventrolateral periaqueductal gray caudal partcontraPAGvlc2
Dorsolateral humpcontraCERcndl0
Anterior interposed nucleuscontraAIN0
Posterior interposed nucleuscontraCERpin0
Lateral cerebellar nucleuscontraCERL0
Medial cerebellar nucleuscontraMed0
A5 noradrenaline cellscontraA51
Locus coeruleuscontraLC1
Koelliker Fuse nucleuscontraKF4
Lateral parabrachial nucleus crescent partcontraLPBCr1
Lateral parabrachial nucleus dorsal partcontraLPBD0.5
Lateral parabrachial nucleus external partcontraLPBE0.5
Lateral parabrachial nucleus ventral partcontraLPBV0.5
Caudal portion of the parabrachial nucleus central lateral partcontraPBCeLC0.5
Rostral portion of the parabrachial nucleus central lateral partcontraPBCeLR0.5
Parabrachial nucleus medialcontraPBnMe2
Medial parabrachial nucleus external partcontraMPBE0.5
Trigeminal ganglioncontra5Gn1
Ventrolateral part of the mandibular region of the trigeminal ganglioncontra5GnMaVL1
Trigeminal ganglion dorsomedial partcontra5Gndm-0.5
Nucleus of the solitary tractcontraSol0.5
Dorsal raphe nucleuscontraDR2
Dorsal raphe nucleus lateral partcontraDRLa-0.5
Dorsal raphe nucleus lateral wingcontraDRlw2
Lateral hypothalamic areacontraLH1
Area lateralis hypothalamicus posterior [Regio hypothalamus caudalis]contraDMrhc0.5
Centromedial nucleus of hypothalamuscontraMHAcm-0.5
Ventromedial hypothalamic nucleuscontraVMH-0.5
Arcuate nucleuscontraArc-0.5
Nucleus paraventricularis [Periventricular zone anterior region]contraPaPAR-0.5
Paraventricular hypothalamic nucleuscontraPa1
A11 dopamine cellscontraA113
Perifornical nucleuscontraPeF1
Central amygdaloid nucleuscontraCe-3
Agranular insular cortex rostral partcontraRAIC2
Dysgranular insular cortex layer 5contraDIL52
Granular insular cortex layer 5contraGIL52
Medial agranular prefrontal cortexcontraAGm2
Primary somatosensory cortexcontraS12
Primary somatosensory cortex barrel fieldcontraS1BF3
Primary somatosensory cortex layer 5contraS1L53
Central dysgranular zone between E4 whisker and forelimb barrel field layers 5contraS1BFcdysL53
Central dysgranular zone between E4 whisker and forelimb barrel field layers 6contraS1BFcdysL63
Posterior dygranular zone between whisker and trunk representation layer 5contraS1pdyL53
Posterior dygranular zone between whisker and trunk representation layer 6contraS1pdyL63
Lamina 3 of the dorsal horn of spinal cordcontraDHMESL33
Lamina 4 of dorsal horn of spinal cordcontraDHMESL43
Lamina 1 of dorsal horn of spinal cordcontrasDHMESL1-0.5
Lamina 2 of dorsal horn of spinal cordcontrasDHMESL2-0.5
Cervical spinal cord layer 5contraCSegL53
Middle meningeal arteryipsimime-0.5
Adventitia of the middle meningeal arteryipsimimea-0.5
Superficial temporal arteryipsista-0.5
Superior dura sinusipsisds-0.5
Adventitia of the superior dura sinusipsiasds-0.5
Periaqueductal grayipsiPAG3
Dorsolateral periaqueductal grayipsiDLPAG3
Dorsolateral periaqueductal gray middle partipsiDLPAGm1
Ventrolateral periaqueductal grayipsiVLPAG3
Ventrolateral periaqueductal gray caudal partipsiPAGvlc1
M subdivision of the periaqueductal grayipsiPAGMs-0.5
Superior colliculusipsiSC0
Superior colliculus lateral partipsiSCL0
Rostrocaudal extent of the superior colliculus lateral partipsiSCLrce0
Superior colliculus medial partipsimSC0
Superior colliculus rostral medial partipsiSCRM0
Superior colliculus rostral medial part layer 1ipsiSCRML10
Superior colliculus rostral medial part layer 2ipsiSCRML20
Superior colliculus rostral medial part layer 3ipsiSCRML30
Superior colliculus rostral medial part layer 4ipsiSCRML40
Superior colliculus rostral medial part layer 5ipsiSCRML50
Superior colliculus centeripsiSCC0
Superior colliculus center rostrocaudal extentipsiSCCrce0
Dorsolateral humpipsiCERcndl2
Anterior interposed nucleusipsiAIN1
Posterior interposed nucleusipsiCERpin0
Lateral cerebellar nucleusipsiCERL1
Medial cerebellar nucleusipsiMed0
A3 noradrenaline areaipsiA31
Locus coeruleusipsiLC2
Pontine reticular nucleusipsiPRN2
Koelliker Fuse nucleusipsiKF3
Caudal Koelliker Fuse nucleusipsiKFc-0.5
Lateral parabrachial nucleus crescent partipsiLPBCr1
Lateral parabrachial nucleus dorsal partipsiLPBD0.5
Lateral parabrachial nucleus external partipsiLPBE0.5
Lateral parabrachial nucleus ventral partipsiLPBV0.5
Caudal portion of the parabrachial nucleus central lateral partipsiPBCeLC1
Rostral portion of the parabrachial nucleus central lateral partipsiPBCeLR1
Caudal third of the external lateral subnucleus of the parabrachial nucleusipsiPBeDct-0.5
Parabrachial nucleus medialipsiPBnMe2
Medial parabrachial nucleus external partipsiMPBE0.5
Gigantocellular reticular nucleusipsiGi-0.5
Medullary reticular nucleusipsiMdD2
Medullary reticular nucleus dorsal partipsiMdDd3
Medullary reticular nucleus rostromedial partipsiMdDrm2
Medullary reticular nucleus lateral partipsiMdL1
Parvicellular reticular nucleus rostral portionipsipRNr-0.5
Mesencephalic trigeminal nucleusipsiMe5-0.5
Principal sensory trigeminal nucleus rostral partipsiPr5ro1
Spinal trigeminal nucleus caudal part layer 2ipsiSp5CaL2-0.5
Spinal trigeminal nucleus interpolar partipsiSp5I3
Spinal trigeminal nucleus interpolar part ventromedial partipsiSp5IVM-0.5
Spinal trigeminal nucleus oral partipsiSp5O2
Ventrolateral part of spinal trigeminal nucleus oral partipsiSp5OVL-0.5
Spinal trigeminal nucleus ventromedial portionipsiSp5ncvm-0.5
Trigeminal ganglionipsi5Gn3
Maxillary region of the trigeminal ganglionipsi5GnV20.5
Trigeminal ganglion lateral partipsi5GnL2
Trigeminal ganglion medial partipsi5GnM2
Nucleus of the solitary tractipsiSol0.5
Nucleus of the solitary tract commissural partipsiSolC1.5
Nucleus of the solitary tract lateral partipsiSolL1.5
Nucleus of the solitary tract medial partipsiSolM1.5
Nucleus of the solitary tract medial part lateral zoneipsiSolML0.5
Medio-caudal nucleus of the solitary tractipsiSolmc0
Raphe nucleiipsiRAN2
Dorsal raphe nucleusipsiDR3
Dorsal raphe nucleus caudal partipsiDRC-0.5
Dorsal raphe nucleus dorsal partipsiDRD-0.5
Dorsal raphe nucleus lateral partipsiDRLa-0.5
Dorsal raphe nucleus lateral wingipsiDRlw3
Dorsal raphe nucleus medial partipsiDRNM-0.5
Dorsal raphe nucleus rostral partipsiDRr-0.5
Dorsal raphe nucleus ventrolateral partipsiDRVL-0.5
Raphe magnus nucleusipsiRMg3
Raphe pallidus nucleusipsiRPa-0.5
A1 noradrenergic cellsipsiA12
Lateral paragigantocellular nucleusipsiLPGi-0.5
Lateral paragigantocellular nucleus alpha partipsiLPBGiA-0.5
Lateral zoneipsiLHA0.5
Lateral hypothalamic areaipsiLH2
Lateral hypothalamic area perifornical partipsiPFx1
Area lateralis hypothalamicus posterior [Regio hypothalamus caudalis]ipsiDMrhc1
Centromedial nucleus of hypothalamusipsiMHAcm-0.5
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM1
Dorsomedial hypothalamic nucleus dorsomedial partipsiDMDM1
Ventromedial hypothalamic nucleusipsiVMH-0.5
Arcuate nucleusipsiArc-0.5
Nucleus paraventricularis [Periventricular zone anterior region]ipsiPaPAR-0.5
Paraventricular hypothalamic nucleusipsiPa3
Paraventricular hypothalamic nucleus magnocellular division posterior partipsiPaMagP3
Paraventricular nucleus lateral parvocellular partipsiPaLp3
Paraventricular nucleus medial parvocellular partipsiPaMep3
Paraventricular nucleus medial parvicellular part dorsal zoneipsiPVHmpdo1
Paraventricular hypothalamic nucleus parvocellular division dorsomedial capsular partipsiPavPodmc3
Paraventricular hypothalamic nucleus parvocellular division ventral partipsiPavPoV3
Paraventricular hypothalamic nucleus parvocellular division posterior partipsiPavPoP3
Paraventricular hypothalamic nucleus caudal levelipsiPaCa3
A11 dopamine cellsipsiA112
Perifornical nucleusipsiPeF2
Retrochiasmatic areaipsiRCh1
Basolateral amygdaloid nucleusipsiBL0
Basomedial amygdaloid nucleusipsiBM0
Central amygdaloid nucleusipsiCe-3
Medial amygdaloid nucleusipsiMe0
Cingulate cortex layer 5ipsiCgL53
Insular cortexipsiICX-0.5
Dysgranular insular cortexipsiDI2
Granular insular cortexipsiGI2
Insular cortex layer 5ipsiICXL53
Lateral agranular prefrontal cortexipsiAGl0
Primary somatosensory cortexipsiS12
Primary somatosensory cortex barrel fieldipsiS1BF1
Posteromedial barrel subfield vibrissae row CipsiPMBSFC3
Posteromedial barrel subfield vibrissae row DipsiPMBSFD3
Primary somatosensory cortex barrel field layer 5b pyramidal tract neuronsipsiS1BF5bpt-0.5
Primary somatosensory cortex layer 5ipsiS1L53
Secondary somatosensory cortexipsiS23
Secondary somatosensory cortex layer 5ipsiS2L53
Dorsal root ganglion C1ipsiDRGC10
Cervical segment 2ipsiCS2-0.5
Dorsal root ganglion C2ipsiDRGC2-0.5
Cervical segment 3ipsiCS3-0.5
Dorsal root ganglion C3ipsiDRGC31
Cervical segment 4ipsiCS4-0.5
Dorsal root ganglion C4ipsiDRGC4-0.5
Cervical segment 5ipsiCS5-0.5
Dorsal root ganglion C5ipsiDRGC5-0.5
Spinal cord layer 1 C5ipsiSCL1C51
Spinal cord layer 2 C5ipsiSCL2C51
Cervical segment 6ipsiCS6-0.5
Dorsal root ganglion C6ipsiDRGC6-0.5
Spinal cord layer 1 C6ipsiSCL1C61
Spinal cord layer 2 C6ipsiSCL2C61
Dorsal root ganglion C7ipsiDRGC7-0.5
Spinal cord layer 1 C7ipsiSCL1C71
Spinal cord layer 2 C7ipsiSCL2C71
Dorsal root ganglion C8ipsiDRGC8-0.5
Thoracal segment 6ipsiT60.5
Thoracal segment 7ipsiT70.5
Thoracal segment 8ipsiT80.5
Thoracal segment 9ipsiT90.5
Dorsal root ganglion L2ipsiDRGL20
Lumbar segment 6ipsiL60
Anterior ethmoidal nerveipsiaemn-0.5
Geniculate ganglionipsiAutoGG-0.5
Vagus nerveipsiAutoV-0.5
Facial nerveipsi7fn-2
Frontal nerveipsiFroN0
Greater occipital nerveipsiPNSgo0
Infraorbital nerveipsiiobn3
Mandibulary nerveipsi5V3-0.5
Maxillary nerveipsi5V2-0.5
Ophthalmic nerveipsi5V1-0.5
Zygomaticofacial nerveipsizfn0
Supraorbital nerveipsisuon0.5
Corpuscle region of incisal papillacontraOrgCIP-0.5
Peridontium of incisorsipsiOrgPeriinc-0.5
TongueipsiOrgOCT-10
Oral mucosaipsiOrgOCmuc-0.5
CorneaipsiOrgsCorn-0.5
EyelidipsiOrgsEL0.5
Nociceptive receptorsipsiOrgBSfaceNR-0.5
Fascial vibrissal follicle complexesipsiFVFC-0.5
Hair follicleipsiHaFo-0.5
Vibrissa slow adapt type IipsiSa1HaFo-0.5
Vibrissa slow adapt type IIipsiSa2HaFo-0.5
Large supraorbital vibrissaeipsiLSuOrW-0.5
Vibrissal nerve of follicle row AipsinVFCrA1
Vibrissal follicle complex B3ipsiVFCB3-0.5
Vibrissal follicle complex B4ipsiVFCB4-0.5
Vibrissal follicle complex C1ipsiVFCC1-0.5
Vibrissal follicle complex D4ipsiVFCD4-0.5
Vibrissal follicle complex D5ipsiVFCD5-0.5
Vibrissal follicle complex E1ipsiVFCE1-0.5
Vibrissal follicle complex E2ipsiVFCE2-0.5
Vibrissal follicle complex E6ipsiVFCE6-0.5
Guard hairipsiOrgGuH-0.5
Ophthalmic hairipsiOrgBSoh-0.5
Anterior digastricus muscleipsiMuscADig-10
Posterior digastricus muscleipsiMuscPDig-10
Genioglossus muscleipsiMuscGenioG-10
Geniohyoid muscleipsiMuscGenio-10
Musculus masseteripsiMuscMass-10
Temporal muscleipsiMuscT-10
Pterygoid muscleipsiMuscPterygo-10
Mylohyoid muscleipsiMuscMyhy-10
Styloglossus muscle systemipsiMuscStyG-10
Buccinator muscleipsiMuscBucc-10
PlatysmaipsiMuscPla-10
Zygomatic muscleipsiMuscZygo-10
Hyoglossus muscleipsiMuscHyo-10

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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