University of Rostock

Department of Anatomy

Neuroscience Group

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Rat connectome



Parabigeminal nucleus left


Abbreviation
PBG
Color       
Superior regionsMesencephalon

SynonymsAbbr.Language
 Pbg 
Parabigeminal nucleusNPBEng
Parabigeminal nucleusPBGEng

SubregionsSide
Central portionleft
Periparabigeminal arealeft
Peripheral portionleft
Parabigeminal nucleus laterally to the lateral lemniscusleft
Ventral parabigeminal nucleusleft
Dorsal portion of the nucleus parabigeminalis pigmentosusleft
Lateral portion of the nucleus parabigeminalis pigmentosusleft
Parabigeminal nucleus middle subnucleusleft
Parabigeminal nucleus medial partleft

Output to

NameSideAbbr.WeightDetails
Periaqueductal grayipsiPAG3
Superior colliculusipsiSC3
Superior colliculus superficial layersipsiSCs-0.5
Optic nerve layer of the superior colliculusipsiOp-0.5
Ventral tegmental area A10ipsiVTA2
Mesencephalic reticular formationipsiMRF3
Olivary pretectal nucleusipsiOPT-3
Anteroventral periventricular nucleus [Anterior hypothalamic area]ipsiAVPe0
Arcuate nucleusipsiArc2
Periventricular hypothalamic nucleus rostroventral partipsiPeRV-0.5
Suprachiasmatic nucleusipsiSCh2
Rostral part of suprachiasmatic nucleus ventrolateral partipsiSCnVLR2
Retrochiasmatic areaipsiRCh3
Retrochiasmatic area rostral partipsiRChR-0.5
Dorsal part of the lateral geniculate complexipsiLGd3
Ventral part of the lateral geniculate complexipsiLGv2
Lateral posterior thalamic nucleusipsiLP-1
Reticular thalamic nucleusipsiRt-3
Nucleus of the optic tractipsiOT-3
Optic chiasmipsiox-2
Pretectal regionipsiPRT2
Anterior pretectal nucleusipsiAPT2
Stria medullaris of the thalamusipsism0
Central amygdaloid nucleusipsiCe3
Central amygdaloid nucleus medial divisionipsiCeM-0.5
Fornixipsif0
Anterior cingulate cortexipsiACC2
Dorsal geniculate nucleusipsiDLG-0.5
Dorsal geniculate nucleus lateral partipsiDLGl-0.5
Ventral lateral geniculate nucleusipsiVLG-0.5
Interpeduncular nucleusipsiIP1
Olfactory tubercleipsiTuO0
Superior colliculuscontraSC3
Superior colliculus anterior partcontraSCA-0.5
Superior colliculus superficial layerscontraSCs3
Superior colliculus posterior partcontraSCP-0.5
Anteroventral periventricular nucleus [Anterior hypothalamic area]contraAVPe0
Paroptic nucleuscontraPaO-2
Retrochiasmatic areacontraRCh0.5
Dorsal part of the lateral geniculate complexcontraLGd3
Lateral posterior thalamic nucleuscontraLP-0.5
Optic tractcontraopt-2
Pretectal regioncontraPRT2
Anterior pretectal nucleuscontraAPT2
Stria medullaris of the thalamuscontrasm0
Central amygdaloid nucleuscontraCe3
Central amygdaloid nucleus lateral division capsular partcontraCeC-0.5
Central amygdaloid nucleus medial divisioncontraCeM-0.5
Fornixcontraf0
Dorsal geniculate nucleus lateral partcontraDLGl-0.5
Ventral lateral geniculate nucleuscontraVLG2

Input from

NameSideAbbr.WeightDetails
Periaqueductal grayipsiPAG0.5
Dorsal periaqueductal gray caudal partipsiDPAGC0
Dorsolateral periaqueductal gray caudal partipsiPAGdlc0.5
Dorsolateral periaqueductal gray rostral partipsiPAGdlr0
Ventrolateral periaqueductal gray caudal partipsiPAGvlc0
Ventrolateral periaqueductal gray rostral partipsiPAGvlr0
Superior colliculusipsiSC4
Superior colliculus caudal partipsicSC0.5
Superior colliculus superficial layersipsiSCs2
Superficial gray layer of the superior colliculusipsiSuG-0.5
Superior colliculus superficial layers commissural neuronsipsiSCscn-0.5
Superior colliculus rostral part two-thirdsipsirttSC-0.5
Laterodorsal tegmental nucleusipsiLDTg-0.5
Dorsal tegmental nucleusipsiDTg1
Dorsal tegmental nucleus lateral partipsiDLTN1
Mesencephalic reticular formationipsiMRF-1
Lateral hypothalamic areaipsiLH0.5
Lateral hypothalamic area perifornical partipsiPFx1
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM0.5
Dorsomedial hypothalamic nucleus dorsomedial partipsiDMDM0
Posterior hypothalamic areaipsiPHA0.5
Suprachiasmatic nucleusipsiSCh-0.5
Dorsal part of the lateral geniculate complexipsiLGd-3
Ventral part of the lateral geniculate complexipsiLGv0
External medullary laminaipsieml-0.5
RetinaipsiRET-0.5
Ventral lateral geniculate nucleusipsiVLG-0.5
Lateral geniculate body lateral partipsiLGL-0.5
Periaqueductal graycontraPAG0
Dorsal periaqueductal gray caudal partcontraDPAGC0
Dorsolateral periaqueductal gray caudal partcontraPAGdlc0.5
Dorsolateral periaqueductal gray rostral partcontraPAGdlr0
Ventrolateral periaqueductal gray caudal partcontraPAGvlc0.5
Ventrolateral periaqueductal gray rostral partcontraPAGvlr0
Superior colliculuscontraSC3
Superior colliculus superficial layerscontraSCs-0.5
Dorsal tegmental nucleuscontraDTg0.5
Dorsal tegmental nucleus lateral partcontraDLTN0.5
RetinacontraRET-0.5
Lateral geniculate complexcontraLG1
Ventral lateral geniculate nucleuscontraVLG-0.5
Lateral geniculate body rostral halfcontraLGrh-0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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