University of Rostock

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Rat connectome



Anteromedial thalamic nucleus rostral part left


Abbreviation
AMr
Color       
Superior regionsAnteromedial thalamic nucleus

SynonymsAbbr.Language
Anteromedial thalamic nucleus rostral partAMrEng

SubregionsSide
Anteromedial thalamic nucleus rostral part peripheral partleft

Output to

NameSideAbbr.WeightDetails
Basolateral amygdaloid nucleusipsiBL1
Lateral amygdaloid nucleusipsiLA1
Dorsal striatumipsiCPud0.5
SubiculumipsiS-0.5
Medial part of the temporal subiculum deep part of the pyramidal layeripsiSMTedL53
Subiculum ventral partipsiSv2
PresubiculumipsiPrS-0.5
Lamina interna of the parasubiculumipsiPaSLi1
Entorhinal cortexipsiEnt-0.5
Lateral entorhinal cortex caudomedial partipsiLEntcm2
Lateral entorhinal cortex caudomedial part layer 4ipsiLEntcmL43
Lateral entorhinal cortex lateral part layer 4ipsiLEntLaL41
Lateral entorhinal cortex lateral part layer 5ipsiLEntLaL53
Lateral entorhinal cortex lateral part layer 6ipsiLEntLaL63
Medial entorhinal cortexipsiMEnt2
Medial entorhinal cortex layer 1ipsiMEntLyL12
Medial entorhinal cortex layer 5ipsiMEntLyL52
Medial entorhinal cortex layer 6ipsiMEntLyL62
Medial entorhinal cortex caudal poleipsiMEntC3
Retrosplenial granular cortex a regionipsiRSGa2
Retrosplenial granular cortex b regionipsiRSGb-0.5
Area 29e caudal partipsiA29eC-0.5
Area 29e deep layersipsiA29edL-0.5
Area 29e layer 1ipsiA29eL1-0.5
Cingulate cortex area 1 caudal partipsiCg1c-3
Cingulate cortex area 2 caudal partipsiCg2c-3
Cingulate cortex caudal intermediate partipsiCg2i-3
Caudal cingulumipsiccg-2
Prelimbic cortex caudal partipsiPrLc-3
Prelimbic cortex rostral partipsiPrLr-3
Infralimbic cortexipsiIL-3
Temporal association area 2 superficial layer 1ipsiTe2sL13
Temporal association area 2 layer 5ipsiTe2L53
Frontal polar cortexipsiFP-3
Lateral neocortexipsiLCX3
Perirhinal cortexipsiA352
Perirhinal cortex superficial layer 1ipsiPRhsL11
Perirhinal cortex layer 5ipsiA35L53
Secondary visual cortex medial area layersipsiV2MLa-0.5
Secondary visual cortex lateral area superficial layer 1ipsiV2LsL11
Secondary visual cortex lateral area layer 5ipsiV2LL51
Secondary visual cortex lateral area layer 6ipsiV2LL61
Primary visual cortex binocular area superficial layer 1ipsiV1BsL11
Primary visual cortex binocular area layer 5ipsiV1BL51
Primary visual cortex binocular area layer 6ipsiV1BL61
Primary visual cortex monocular area superficial layer 1ipsiV1MsL11
Primary visual cortex monocular area layer 5ipsiV1ML51
Primary visual cortex monocular area layer 6ipsiV1ML61
Medial orbital cortexipsiMO-3

Input from

NameSideAbbr.WeightDetails
Caudal part of the retrosplenial dysgranular cortexipsiRSdysC3
Area 29d caudal part layer 6ipsiA29dCL62
Area 29d rostral partipsiA29dR1
Dorsal anterior cingulate cortexipsiDACC2
Ventral anterior cingulate cortexipsiVACC2
Medial agranular prefrontal cortex lateral partipsiAGmL1
Medial agranular prefrontal cortex medial partipsimAGm2
Medial agranular prefrontal cortex rostral partipsirAGm0
Area 29d caudal part layer 6contraA29dCL62
Dorsal anterior cingulate cortexcontraDACC1
Ventral anterior cingulate cortexcontraVACC1
Medial agranular prefrontal cortex lateral partcontraAGmL0.5
Medial agranular prefrontal cortex medial partcontramAGm1
Medial agranular prefrontal cortex rostral partcontrarAGm0

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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