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Rat connectome



Bed nucleus of the stria terminalis interfascicular nucleus left


Abbreviation
BSTif
Color       
Superior regionsBed nucleus of the stria terminalis posterior division

SynonymsAbbr.Language
Bed nucleus of the stria terminalis interfascicular nucleusBSTifEng
Bed nuclei of the stria terminalis interfascicular nucleusBSTifEng
Bed nuclei of the stria terminalis posterior division interfascicular nucleusBSTifEng

SubregionsSide
Bed nucleus of the stria terminalis interfascicular nucleus anterolateral partleft
Bed nucleus of the stria terminalis interfascicular nucleus lateral partleft
Bed nucleus of the stria terminalis interfascicular nucleus ventral partleft
Bed nucleus of the stria terminalis interfascicular nucleus dorsal partleft

Output to

NameSideAbbr.WeightDetails
Medial preoptic areaipsiMPA2
Medial preoptic nucleusipsiMPO0.5
Juxtaparaventricular part caudal [Lateral hypothalamic area [Preoptic anterior region]]ipsiJPVC1
Juxtaparaventricular part rostral [Lateral hypothalamic area [Preoptic anterior region]]ipsiJPVR2
Lateral hypothalamic area juxtadorsomedial regionipsiJDM2
Lateral hypothalamic area motor related juxtaventromedial region dorsal zoneipsiLHAjvd4
Lateral hypothalamic area motor related juxtaventromedial region ventral zoneipsiLHAjvv4
Lateral hypothalamic area [Lateral zone tuberal level]ipsiLHtu1
Medial division of the hypothalamusipsiMdH1
Anterior hypothalamic area posterior partipsiAHAP0.5
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM2
Arcuate nucleusipsiArc3
Nucleus paraventricularis [Periventricular zone anterior region]ipsiPaPAR-0.5
Paraventricular hypothalamic nucleus posterior part [Periventricular zone anterior region]ipsiPaPo0.5
Paraventricular hypothalamic nucleusipsiPa2
Paraventricular nucleus anterior partipsiPaan1
Paraventricular nucleus dorsal edgeipsiPaDoE0.5
Paraventricular nucleus dorsal most portionipsiPaDom1
Paraventricular nucleus medial part at mid paraventricular hypothalamic nucleus levelipsiPamemi0.5
Paraventricular nucleus medial part at posterior paraventricular hypothalamic nucleus levelipsiPamepo0.5
Peri-paraventricular hypothalamic nucleusipsiPPa1
Premammillary nucleus dorsal partipsiPMD2
Reuniens thalamic nucleusipsiRe1
Zona incerta medial tipipsiZImt1
Anterior basolateral nucleusipsiBLA0
Posterior basolateral nucleusipsiBLP0
Anterior basomedial nucleusipsiBMA2
Posterior basomedial nucleusipsiBMP2
Lateral amygdaloid nucleusipsiLA0.5
Bed nucleus of the stria terminalis anterior division anterolateral nucleusipsiBSTal0
Bed nucleus of the stria terminalis anterior division dorsomedial nucleusipsiBSTdm0
Bed nucleus of the stria terminalis anterior division subcommissural partipsiBSTAsc0
Bed nucleus of the stria terminalis anterior medial partipsiBSTAM3
Bed nucleus of the stria terminalis fusiform partipsiFu0
Bed nucleus of the stria terminalis magnocellular nucleusipsiBSTmc2
Bed nucleus of the stria terminalis oval nucleusipsiBSTo0
Bed nucleus of the stria terminalis rhomboid nucleusipsiBSTrh0
Bed nucleus of the stria terminalis juxtacapsular partipsiBSTj0
Bed nucleus of the stria terminalis dorsal nucleusipsiBSTd0
Bed nucleus of the stria terminalis interfascicular nucleusipsiBSTif4
Bed nucleus of the stria terminalis posterior division cell-sparse zoneipsiBSTsz0
Bed nucleus of the stria terminalis posterior division striatal extensionipsiBSTse0
Bed nucleus of the stria terminalis posterior division ventral nucleusipsiBSTV2
Bed nucleus of the stria terminalis premedullary nucleusipsiBSTpm0
Bed nucleus of the stria terminalis principal nucleusipsiBSTpr-2
Bed nucleus of the stria terminalis transverse nucleusipsiBSTt3
Central amygdaloid nucleusipsiCe1
Capsule like area surrounding central amygdaloid nucleusipsiCec1.5
Central amygdaloid nucleus lateral divisionipsiCeL0
Central amygdaloid nucleus medial divisionipsiCeM0.5
Amygdalopiriform transition areaipsiAPir-2
Anterior amygdaloid areaipsiAA0.5
Anterior cortical amygdaloid nucleusipsiACo0.5
Posterior amygdaloid nucleusipsiCOAp2
Posterior amygdaloid nucleus medial partipsiCOApm0.5
Posterolateral cortical nucleusipsiPLCo2
Medial amygdaloid nucleus anterodorsal partipsiMeAD3
Medial amygdaloid nucleus anteroventral partipsiMeAV-2
Medial amygdaloid nucleus posteroventral partipsiMePV3
Bed nucleus of the accessory olfactory tractipsiBAOT0
Intercalated nuclei of the amygdalaipsiI-2
Postpiriform transition areaipsiTR0
Dorsomedial hypothalamic nucleus [Medial zone]contraDM-0.5
Paraventricular nucleus medial partcontraPame0.5

Input from

NameSideAbbr.WeightDetails
Dorsal raphe nucleus caudal partipsiDRC1
HypothalamusipsiHYPO0.5
Juxtaparaventricular part caudal [Lateral hypothalamic area [Preoptic anterior region]]ipsiJPVC1
Juxtaparaventricular part rostral [Lateral hypothalamic area [Preoptic anterior region]]ipsiJPVR2
Lateral hypothalamic area juxtadorsomedial regionipsiJDM2
Lateral hypothalamic area motor related juxtaventromedial region dorsal zoneipsiLHAjvd4
Lateral hypothalamic area motor related juxtaventromedial region ventral zoneipsiLHAjvv3
Tuberal nucleusipsiTU2
Anterior hypothalamic area central partipsiAHAC3
Anterior hypothalamic area posterior partipsiAHAP1
Anterior hypothalamic nucleus ventromedial partipsiAHAvm2
Anteroventral periventricular nucleus [Anterior hypothalamic area]ipsiAVPe1
Anterior hypothalamic nucleusipsiAHn2.5
Anterior part of the anterior hypothalamic nucleusipsiAHna3
Ventromedial hypothalamic nucleus anterior partipsiVMHA3
Ventromedial hypothalamic nucleus central partipsiVMHC3
Ventromedial hypothalamic nucleus dorsomedial partipsiVMHDM3
Ventromedial hypothalamic nucleus ventrolateral partipsiVMHVL3
Subparaventricular zone of the hypothalamus perisuprachiasmatic regionipsiSBPVps1
Suprachiasmatic nucleus dorsomedial partipsiSCnDM1
Suprachiasmatic nucleus ventrolateral partipsiSCnVL1
Perifornical nucleus medial partipsiPeFM1
Retrochiasmatic area lateral partipsiRChL3
Posterior basolateral nucleusipsiBLP0
Anterior basomedial nucleusipsiBMA1
Posterior basomedial nucleusipsiBMP0.5
Bed nucleus of the stria terminalis anterior division anterolateral nucleusipsiBSTal1
Bed nucleus of the stria terminalis anterior division dorsomedial nucleusipsiBSTdm2
Bed nucleus of the stria terminalis anterior division subcommissural partipsiBSTAsc0.5
Bed nucleus of the stria terminalis anterior medial partipsiBSTAM3
Bed nucleus of the stria terminalis fusiform partipsiFu0.5
Bed nucleus of the stria terminalis magnocellular nucleusipsiBSTmc0.5
Bed nucleus of the stria terminalis oval nucleusipsiBSTo4
Bed nucleus of the stria terminalis rhomboid nucleusipsiBSTrh4
Bed nucleus of the stria terminalis juxtacapsular partipsiBSTj0
Bed nucleus of the stria terminalis dorsal nucleusipsiBSTd3
Bed nucleus of the stria terminalis interfascicular nucleusipsiBSTif4
Bed nucleus of the stria terminalis posterior division ventral nucleusipsiBSTV0.5
Bed nucleus of the stria terminalis principal nucleusipsiBSTpr1.5
Bed nucleus of the stria terminalis transverse nucleusipsiBSTt3
Capsule like area surrounding central amygdaloid nucleusipsiCec0
Central amygdaloid nucleus lateral divisionipsiCeL0
Central amygdaloid nucleus medial divisionipsiCeM0
Amygdalopiriform transition areaipsiAPir3
Anterior amygdaloid areaipsiAA0
Anterior cortical amygdaloid nucleusipsiACo1
Posterior amygdaloid nucleusipsiCOAp3
Posterior amygdaloid nucleus medial partipsiCOApm3
Posterolateral cortical nucleusipsiPLCo-0.5
Medial amygdaloid nucleus anterodorsal partipsiMeAD-0.5
Medial amygdaloid nucleus anteroventral partipsiMeAV0
Medial amygdaloid nucleus posterodorsal partipsiMePD0.5
Medial amygdaloid nucleus posteroventral partipsiMePV2
Subiculum ventral partipsiSv3
Postpiriform transition areaipsiTR2
Tuberal nucleuscontraTU1
Anteroventral periventricular nucleus [Anterior hypothalamic area]contraAVPe0.5
Ventromedial hypothalamic nucleus anterior partcontraVMHA1.5
Ventromedial hypothalamic nucleus central partcontraVMHC1.5
Ventromedial hypothalamic nucleus dorsomedial partcontraVMHDM1.5
Ventromedial hypothalamic nucleus ventrolateral partcontraVMHVL1.5
Posterior basomedial nucleuscontraBMP0.5
Posterior amygdaloid nucleus medial partcontraCOApm3
Subiculum ventral partcontraSv1

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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