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Rat connectome



Anteroventral periventricular nucleus [Anterior hypothalamic area] right


Abbreviation
AVPe
Color       
Superior regionsPeriventricular hypothalamic nucleus [Anterior hypothalamic area]

SynonymsAbbr.Language
Anteroventral periventricular nucleus [Anterior hypothalamic area]AVPe 
Periventricular hypothalamic nucleus anteroventral part  
Anteroventral periventricular nucleus [Anterior hypothalamic area]AVPe 
Anteroventral periventricular nucleusAVPVEng
Anteroventral periventricular nucleusAVPVEng
Nucleus periventricularis anteroventralis Lat

SubregionsSide
Anteroventral periventricular nucleus [Anterior hypothalamic area] superficial partright
Anteroventral periventricular nucleus most medial part [Anterior hypothalamic area]right
Anteroventral periventricular nucleus lateral borderright

Output to

NameSideAbbr.WeightDetails
Periaqueductal graycontraPAG2
A5 noradrenaline cellscontraA50
Barringtons nucleuscontraBar0.5
Pontine graycontraPG0.5
Lateral parabrachial nucleus dorsal partcontraLPBD-0.5
Lateral parabrachial nucleus lateral partcontraLPBL-0.5
Lateral parabrachial nucleus central lateral partcontraLPBCL-0.5
Nucleus of the solitary tract medial partcontraSolM0.5
Inferior salivatory nucleuscontraIS0
Superior salivatory nucleuscontraSuS0
Lateral preoptic areacontraLPO-0.5
Median preoptic nucleuscontraMnPO0.5
Preoptic region rostral partcontraPREOr-0.5
Dorsal tuberomammillary nucleuscontraDTM0.5
Dorsomedial hypothalamic nucleus non-compact partcontraDMHyncp-0.5
Dorsomedial hypothalamic nucleus [Medial zone]contraDM1
Dorsomedial hypothalamic nucleus ventral partcontraDMV-0.5
Arcuate nucleuscontraArc0.5
Nucleus paraventricularis [Periventricular zone anterior region]contraPaPAR1
Paraventricular hypothalamic nucleus lateral parvocellular partcontraLPPa0.5
Paraventricular hypothalamic nucleus ventral part [Periventricular zone anterior region]contraPaV0.5
Paraventricular hypothalamic nucleuscontraPa0.5
Supraoptic nucleus [Supraoptic region]contraSO0.5
Medial mammillary nucleuscontraMMn0.5
Premammillary nucleus ventral partcontraPMV0.5
Supramammillar nucleuscontraSuM0.5
Subparafascicular thalamic nucleus caudal partcontraSPFc0.5
Subparafascicular thalamic nucleus medial partcontraSPFme0.5
Subparafascicular thalamic nucleus rostral partcontraSPFr0.5
Lateral habenular nucleuscontraLHb0.5
Medial habenular nucleuscontraMHb0.5
Bed nucleus of the stria terminalis anterior divisioncontraBSTA0.5
Bed nucleus of the stria terminalis posterior divisioncontraBSTP0.5
Bed nucleus of the stria terminalis interfascicular nucleuscontraBSTif0.5
Bed nucleus of the stria terminalis transverse nucleuscontraBSTt0.5
Bed nucleus of the stria terminalis ventral partcontraBNSTv0.5
Lateral septal nucleus intermediate partcontraLSI0.5
Lateral septal nucleus ventral partcontraLSV2
Periaqueductal grayipsiPAG2
A5 noradrenaline cellsipsiA50
Barringtons nucleusipsiBar1
Pontine grayipsiPG2
Lateral parabrachial nucleus dorsal partipsiLPBD1
Lateral parabrachial nucleus lateral partipsiLPBL1
Lateral parabrachial nucleus central lateral partipsiLPBCL1
Nucleus of the solitary tract medial partipsiSolM1
Inferior salivatory nucleusipsiIS0
Superior salivatory nucleusipsiSuS0
Diagonal band of BrocaipsiDBB1
Medial septal nucleusipsiMS3
Lateral preoptic areaipsiLPO0.5
Medial preoptic areaipsiMPA2
Medial preoptic nucleusipsiMPO3
Median preoptic nucleusipsiMnPO1
Preoptic region rostral partipsiPREOr4
Dorsal tuberomammillary nucleusipsiDTM1
Ventral tuberomammillary nucleusipsiVTM3
Surrounding of the vascular organ of the lamina terminalisipsiSVOLT-0.5
Dorsomedial hypothalamic nucleusipsiDMHy1
Dorsomedial hypothalamic nucleus non-compact partipsiDMHyncp2
Juxtaparaventricular part caudal [Lateral hypothalamic area [Preoptic anterior region]]ipsiJPVC0.5
Juxtaparaventricular part rostral [Lateral hypothalamic area [Preoptic anterior region]]ipsiJPVR0.5
Lateral zoneipsiLHA3
Lateral hypothalamic area juxtadorsomedial regionipsiJDM1
Lateral hypothalamic area motor related juxtaventromedial region dorsal zoneipsiLHAjvd2
Lateral hypothalamic area motor related juxtaventromedial region ventral zoneipsiLHAjvv1
Tuberal nucleusipsiTU3
Mediobasal hypothalamusipsiMeHypo-0.5
Medial division of the hypothalamusipsiMdH3
Anterior hypothalamic areaipsiAHA-0.5
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM3
Dorsomedial hypothalamic nucleus ventral partipsiDMV-0.5
Ventromedial hypothalamic nucleusipsiVMH-0.5
Ventromedial hypothalamic nucleus dorsomedial partipsiVMHDM1
Ventromedial hypothalamic nucleus ventrolateral partipsiVMHVL3
Mediobasal hypothalamus anterior partipsiMeHypoAnt2
Mediobasal hypothalamus posterior partipsiMeHypoP2
Periventricular zoneipsiPVZ-0.5
Arcuate nucleusipsiArc3
Nucleus paraventricularis [Periventricular zone anterior region]ipsiPaPAR3
Paraventricular hypothalamic nucleus ventral part [Periventricular zone anterior region]ipsiPaV1
Paraventricular hypothalamic nucleus lateral parvocellular partipsiLPPa1
Paraventricular hypothalamic nucleusipsiPa4
Paraventricular hypothalamic nucleus magnocellular divisionipsiPaMag1
Paraventricular hypothalamic nucleus parvocellular divisionipsiPavPo3
Mid paraventricular hypothalamic nucleusipsiMiPa-0.5
Paraventricular hypothalamic nucleus ventral to mid levelipsiPavmi-0.5
Posterior periventricular nucleusipsiPeP3
Subparaventricular zone of the hypothalamusipsiSPa-0.5
Suprachiasmatic nucleusipsiSCh1
Supraoptic nucleus [Supraoptic region]ipsiSO3
Supraoptic nucleus perinuclear zoneipsiSOpnz3
Medial mammillary nucleusipsiMMn1
Premammillary nucleus ventral partipsiPMV3
Supramammillar nucleusipsiSuM1
Retrochiasmatic areaipsiRCh1
Subparafascicular thalamic nucleus caudal partipsiSPFc1
Subparafascicular thalamic nucleus medial partipsiSPFme1
Subparafascicular thalamic nucleus rostral partipsiSPFr2
Optic chiasmipsiox3
Lateral habenular nucleusipsiLHb1
Medial habenular nucleusipsiMHb1
Intermediate lobe of pituitaryipsiIPit1
Bed nucleus of the stria terminalis anterior divisionipsiBSTA2
Bed nucleus of the stria terminalis posterior divisionipsiBSTP2
Bed nucleus of the stria terminalis interfascicular nucleusipsiBSTif1
Bed nucleus of the stria terminalis principal nucleusipsiBSTpr3
Bed nucleus of the stria terminalis transverse nucleusipsiBSTt1
Bed nucleus of the stria terminalis ventral partipsiBNSTv1
SubiculumipsiS-0.5
Posterior hippocampusipsiHIPPpo-0.5
Precommissural nucleusipsiPrC1
Lateral septal nucleus dorsal partipsiLSD3
Lateral septal nucleus intermediate partipsiLSI3
Lateral septal nucleus ventral partipsiLSV3
Anterior cruciate ligamentcontraLigAntCru1
Anterior cruciate ligamentipsiLigAntCru1
Intraperitoneal cavityipsiOrgiPTC1
KidneyipsiOrgsKid1

Input from

NameSideAbbr.WeightDetails
Parabigeminal nucleuscontraPBG0
Periaqueductal gray caudal partcontraPAGc0.5
Substantia nigra A9contraSN0
Ventral tegmental area A10contraVTA0
Peripeduncular nucleuscontraPP0
Dorsal tegmental nucleuscontraDTg0
Dorsal tegmental nucleus lateral partcontraDLTN0
A7 noradrenaline cellscontraA70
Locus coeruleuscontraLC0
Pontine reticular nucleus oral partcontraPnO0
Pontine reticular nucleus caudal partcontraPNC0
Parabrachial nucleus dorsal partcontraPBD0.5
Parabrachial nucleus ventral partcontraPBV0
C1 adrenaline cellscontraC10.5
C2 adrenaline cellscontraC20
A1 noradrenergic cellscontraA10.5
A2 noradrenergic cellscontraA20
Medial preoptic areacontraMPA-0.5
Magnocellular preoptic nucleuscontraMCPO0
Dorsomedial hypothalamic nucleuscontraDMHy0
Lateral hypothalamic areacontraLH0
Anterior hypothalamic areacontraAHA0
Anterior hypothalamic area immediately caudal to the suprachiasmatic areacontraAHAcSCh-0.5
Ventromedial hypothalamic nucleuscontraVMH0.5
Ventromedial hypothalamic nucleus anterior partcontraVMHA0
Ventromedial hypothalamic nucleus central partcontraVMHC3
Ventromedial hypothalamic nucleus ventrolateral partcontraVMHVL3
Arcuate nucleus parts part 2contraArcPaP21
Arcuate nucleus parts part 3contraArcPaP30.5
Arcuate nucleus parts part 4contraArcPaP40
Arcuate nucleus parts part 5contraArcPaP50
Paraventricular hypothalamic nucleus anterior parvicellular part [Periventricular zone anterior region]contraPaAP-0.5
Ventral part of the paraventricular hypothalamic nucleus anterior parvicellular part [Periventricular zone anterior region]contravPaAP-0.5
Adjacent to the ventral part of the paraventricular hypothalamic nucleus anterior parvicellular part [Periventricular zone anterior region]contraPaAPav-0.5
Paraventricular hypothalamic nucleuscontraPa0
Anterior part of periventricular parvocellular subdivision of paraventricular hypothalamic nucleuscontraPVPapvA-0.5
Preoptic periventricular nucleuscontraPePO-0.5
Suprachiasmatic nucleuscontraSCh0
Suprachiasmatic nucleus dorsal divisioncontraSChd-0.5
Region dorsal to suprachiasmatic nucleuscontraSChDT-0.5
Suprachiasmatic preoptic nucleuscontraPSCh-0.5
Supraoptic nucleus [Supraoptic region]contraSO0
Lateral mammillary nucleuscontraLM0
Premammillary nucleuscontraPMAN0
Supramammillar nucleuscontraSuM0
A11 dopamine cellscontraA110.5
A8 dopamine cells retrorubral groupcontraRRF0
Perifornical nucleuscontraPeF-0.5
Retrochiasmatic area immediately caudal to the suprarchiasmatic areacontraRChcSCh-0.5
Subparafascicular thalamic nucleus parvicellular partcontraSPFp1
Basomedial amygdaloid nucleuscontraBM0
Bed nucleus of the stria terminaliscontraBST0
Bed nucleus of the stria terminalis fusiform partcontraFu0.5
Anterior cortical amygdaloid nucleuscontraACo0
Medial amygdaloid nucleuscontraMe0
Parabigeminal nucleusipsiPBG0
Periaqueductal gray caudal partipsiPAGc1
Substantia nigra A9ipsiSN0.5
Substantia nigra reticular compacta border regionipsiSNRCB3
Ventral tegmental area A10ipsiVTA0.5
Peripeduncular nucleusipsiPP1
Dorsal tegmental nucleusipsiDTg1
Dorsal tegmental nucleus lateral partipsiDLTN1
A7 noradrenaline cellsipsiA70
Locus coeruleusipsiLC1
Pontine reticular nucleus oral partipsiPnO0
Pontine reticular nucleus caudal partipsiPNC0
Parabrachial nucleus dorsal partipsiPBD1
Parabrachial nucleus ventral partipsiPBV0.5
C1 adrenaline cellsipsiC11
C2 adrenaline cellsipsiC20
Dorsal raphe nucleusipsiDR0
Median raphe nucleusipsiMnR0
Pontine raphe nucleusipsiPnR0
Raphe magnus nucleusipsiRMg0
A1 noradrenergic cellsipsiA11
A2 noradrenergic cellsipsiA20
Diagonal band of BrocaipsiDBB0.5
Medial septal nucleusipsiMS0.5
Medial tuberal nucleusipsiMTuN2
Medial preoptic areaipsiMPA3
Magnocellular preoptic nucleusipsiMCPO0
Median preoptic nucleusipsiMnPO3
Median preoptic nucleus medial partipsiMnPOm3
Dorsomedial hypothalamic nucleusipsiDMHy4
Juxtaparaventricular part caudal [Lateral hypothalamic area [Preoptic anterior region]]ipsiJPVC0
Juxtaparaventricular part rostral [Lateral hypothalamic area [Preoptic anterior region]]ipsiJPVR0
Lateral hypothalamic area anterior part [Preoptic anterior region]ipsiLHAapar0
Lateral hypothalamic area posterior part [Preoptic anterior region]ipsiLHApPAR0
Lateral hypothalamic area premammillary subfornical region [Preoptic anterior region]ipsiLHAsfp0.5
Lateral hypothalamic areaipsiLH2
Lateral hypothalamic area juxtadorsomedial regionipsiJDM0.5
Lateral hypothalamic area motor related juxtaventromedial regionipsiLHAjvm0
Lateral hypothalamic area motor related juxtaventromedial region dorsal zoneipsiLHAjvd0
Lateral hypothalamic area motor related juxtaventromedial region ventral zoneipsiLHAjvv0
Lateral hypothalamic area subfornical region anterior zoneipsiLHAsfa0
Lateral hypothalamic area perifornical partipsiPFx2
Anterior perifornical regionipsiPFxa2
Anterior hypothalamic areaipsiAHA1.5
Anterior hypothalamic nucleus ventromedial partipsiAHAvm-3
Anterior hypothalamic area immediately caudal to the suprachiasmatic areaipsiAHAcSCh1
Anterior hypothalamic nucleusipsiAHn3
Anterior part of the anterior hypothalamic nucleusipsiAHna1
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM2
Dorsomedial hypothalamic nucleus dorsal partipsiDMD2
Dorsomedial hypothalamic nucleus dorsomedial partipsiDMDM2
Dorsomedial hypothalamic nucleus ventral partipsiDMV2
Posterior hypothalamic areaipsiPHA2
Subparaventricular zoneipsiSuPZ3
Subparaventricular zone ventral partipsiSuPZv2
Lateral part of ventral subparaventricular zoneipsiSuPZvL1
Subparaventricular zone ventromedial partipsiSuPZvm3
Subparaventricular zone dorsomedial partipsiSuPZdm0.5
Subparaventricular zone dorsolateral partipsiSuPZdL1
Ventromedial hypothalamic nucleusipsiVMH3
Ventromedial hypothalamic nucleus anterior partipsiVMHA1
Ventromedial hypothalamic nucleus central partipsiVMHC4
Ventromedial hypothalamic nucleus ventrolateral partipsiVMHVL4
Arcuate nucleusipsiArc-0.5
Arcuate nucleus posterior partipsiArcP2
Arcuate nucleus parts part 2ipsiArcPaP20.5
Arcuate nucleus parts part 3ipsiArcPaP31
Arcuate nucleus parts part 4ipsiArcPaP41
Arcuate nucleus parts part 5ipsiArcPaP51
Arcuate nucleus intermediate partipsiArcim2
Paraventricular hypothalamic nucleus anterior parvicellular part [Periventricular zone anterior region]ipsiPaAP-0.5
Ventral part of the paraventricular hypothalamic nucleus anterior parvicellular part [Periventricular zone anterior region]ipsivPaAP-0.5
Adjacent to the ventral part of the paraventricular hypothalamic nucleus anterior parvicellular part [Periventricular zone anterior region]ipsiPaAPav-0.5
Paraventricular hypothalamic nucleusipsiPa0
Anterior part of periventricular parvocellular subdivision of paraventricular hypothalamic nucleusipsiPVPapvA-0.5
Periventricular hypothalamic nucleusipsiPe2
Preoptic periventricular nucleusipsiPePO1
Subparaventricular zone of the hypothalamus perisuprachiasmatic regionipsiSBPVps3
Suprachiasmatic nucleusipsiSCh2
Suprachiasmatic nucleus dorsal divisionipsiSChd3
Suprachiasmatic nucleus dorsal capipsiSChdc3
Suprachiasmatic nucleus dorsal borderipsiSChdb3
Suprachiasmatic nucleus dorsomedial partipsiSCnDM2
Suprachiasmatic nucleus lateral borderipsiSChlb3
Suprachiasmatic nucleus ventral divisionipsiSChv3
Suprachiasmatic nucleus ventrolateral partipsiSCnVL1
Region dorsal to suprachiasmatic nucleusipsiSChDT1
Suprachiasmatic preoptic nucleusipsiPSCh1
Supraoptic nucleus [Supraoptic region]ipsiSO0
Incerto hypothalamic areaipsiicHYPO2
Lateral mammillary nucleusipsiLM0
Premammillary nucleusipsiPMAN0.5
Premammillary nucleus ventral partipsiPMV3
Supramammillar nucleusipsiSuM2
A11 dopamine cellsipsiA111.5
A8 dopamine cells retrorubral groupipsiRRF0
Perifornical nucleusipsiPeF-0.5
Retrochiasmatic areaipsiRCh2
Basal retrochiasmatic areaipsiBRCh1
Retrochiasmatic area immediately caudal to the suprarchiasmatic areaipsiRChcSCh1
Subparafascicular thalamic nucleus parvicellular partipsiSPFp3
Basolateral amygdaloid nucleusipsiBL1
Anterior basolateral nucleusipsiBLA0
Posterior basolateral nucleusipsiBLP0
Basomedial amygdaloid nucleusipsiBM0
Anterior basomedial nucleusipsiBMA0
Posterior basomedial nucleusipsiBMP0
Lateral amygdaloid nucleusipsiLA0
Bed nucleus of the stria terminalisipsiBST0.5
Bed nucleus of the stria terminalis fusiform partipsiFu0.5
Bed nucleus of the stria terminalis dorsal nucleusipsiBSTd3
Bed nucleus of the stria terminalis principal nucleusipsiBSTpr3
Central amygdaloid nucleus lateral divisionipsiCeL0
Central amygdaloid nucleus lateral division capsular partipsiCeC0
Central amygdaloid nucleus medial divisionipsiCeM0
Amygdalopiriform transition areaipsiAPir0
Anterior amygdaloid areaipsiAA0
Anterior cortical amygdaloid nucleusipsiACo0.5
Posterior amygdaloid nucleusipsiCOAp4
Posterolateral cortical nucleusipsiPLCo0
Nucleus of the lateral olfactory tractipsiLOT0.5
Medial amygdaloid nucleusipsiMe1
Medial amygdaloid nucleus anterodorsal partipsiMeAD0
Medial amygdaloid nucleus posterodorsal partipsiMePD3
Medial amygdaloid nucleus posteroventral partipsiMePV0
Amygdalohippocampal areaipsiAHi-0.5
Posteromedial cortical nucleusipsiPMCo1.5
Hippocampal septalipsiHIPPs3
Subiculum dorsal partipsiSd1
Subiculum ventral partipsiSv2
Postpiriform transition areaipsiTR0
Intergeniculate leafipsiIGL-0.5
Interpeduncular nucleusipsiIP0.5
Lateral septal nucleusipsiLS0
Lateral septal nucleus mediolateral partipsiLSML1
Septofimbrial nucleusipsiSFi1
Ependymocytes of 4th ventricleipsi4Vepc-0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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