University of Rostock

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Rat connectome



Ventral medial prefrontal cortex left


Abbreviation
vmPFC
Color       
Superior regionsPrefrontal cortex

SynonymsAbbr.Language
Ventral medial prefrontal cortexvmPFC 
Ventromedial prefrontal cortexvmPFCEng
Ventromedial prefrontal cortex Eng

SubregionsSide
Ventral part of the ventral medial prefrontal cortexleft
Dorsal part of the ventral medial prefrontal cortexleft

Output to

NameSideAbbr.WeightDetails
Periaqueductal grayipsiPAG-0.5
Pontine sublaterodorsal nucleusipsiPsLdn1
Dorsal raphe nucleusipsiDR3
Median raphe nucleusipsiMnR-0.5
Dorsomedial hypothalamic nucleusipsiDMHy-0.5
Paraventricular hypothalamic nucleusipsiPa-0.5
Interoanteromedial thalamic nucleusipsiIAM-0.5
Central medial thalamic nucleusipsiCM-0.5
Rhomboid thalamic nucleusipsiRh-0.5
Mediodorsal thalamic nucleusipsiMD-0.5
Intermediodorsal thalamic nucleusipsiIMD-0.5
Midline group of the dorsal thalamusipsiMTN-0.5
Paratenial thalamic nucleusipsiPT-0.5
Reuniens thalamic nucleusipsiRe-0.5
Accumbens nucleus shellipsiAcbSh-0.5
Lateral entorhinal cortex deep layer 5ipsiLEntL5b-0.5
Medial entorhinal cortex deep layer 5ipsiMEntLyL5b-0.5
Septal regionipsiSER1.5
Septal regioncontraSER1

Input from

NameSideAbbr.WeightDetails
Mediodorsal thalamic nucleus central partipsiMDC-0.5
Mediodorsal thalamic nucleus dorsal part of the central partipsiMDCd-0.5
Caudal level of the dorsal part of the mediodorsal thalamic nucleus dorsal partipsiMDDc-0.5
Mediodorsal thalamic nucleus lateral partipsiMDL-0.5
Mediodorsal thalamic nucleus medial partipsiMDM-0.5
Mediodorsal thalamic nucleus dorsal part of the medial partipsiMDMD-0.5
Mediodorsal thalamic nucleus rostral partipsiMDr3
Mediodorsal thalamic nucleus intermediate partipsiMDim-0.5
Mediodorsal thalamic nucleus intermediate level of the rostrocaudal axisipsiMDirc-0.5
Anterior basolateral nucleusipsiBLA2
HippocampusipsiHIPP-0.5
Hippocampal temporalipsiHIPPt-0.5
Hippocampus intermediate partipsiHIPPip-0.5
Ventrally in the intermediate part of the hippocampusLipsiHIPPipve-0.5
Dorsally in the intermediate part of the hippocampusipsiHIPPipdo0
Field CA1 of hippocampus layer stratum radiatumipsiCA1rad0.5
Field CA1 of hippocampus layer stratum pyramidaleipsiCA1pyr-0.5
Field CA1 of hippocampus layer stratum oriensipsiCA1or0.5
Field CA2 of hippocampus layer stratum radiatumipsiCA2rad0.5
Field CA2 of hippocampus layer stratum pyramidaleipsiCA2pyr-0.5
Field CA2 of hippocampus layer stratum oriensipsiCA2or0.5
Subiculum stratum radiatumipsiSurad0.5
Subiculum layer 5ipsiSuL50.5
Most caudal part of entorhinal cortexipsiEntmC-0.5
Perirhinal cortex layer 4ipsiA35L43
Perirhinal cortex layer 5ipsiA35L53
Perirhinal cortex layer 6ipsiA35L63
Lateral zonecontraLHA1

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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