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Rat connectome



Hippocampus left


Abbreviation
HIPP
Color       
Superior regionsAllocortex

SynonymsAbbr.Language
 HPF 
HippocampusHPCEng
Archicortex  
Hippocampal formationHFEng
HippocampusHIPPEng

SubregionsSide
Hippocampal fissureleft
Hippocampal regionsleft
Hippocampal sulcusleft
Hippocampus white matterleft

Output to

NameSideAbbr.WeightDetails
Periaqueductal gray rostral partipsiPAGR0
Substantia nigra reticular partipsiSNR3
Ventral tegmental area A10ipsiVTA0
Pontine reticular nucleusipsiPRN0
Dorsal raphe nucleusipsiDR-0.5
Retrotrapezoid nucleusipsiRTN0
Caudal endopiriform regionipsiCEn-0.5
Central endopiriform systemipsiCEnN-0.5
Rostral endopiriform regionipsiREn-0.5
Diagonal band of BrocaipsiDBB2
Nucleus of the horizontal limb of the diagonal bandipsiHDB0
Nucleus of the vertical limb of the diagonal bandipsiVDB3
Medial septal nucleusipsiMS3
Medial septal nucleus dorsal partipsiMSdp-0.5
Medial preoptic areaipsiMPA-0.5
Lateral preoptic nucleusipsiLPN0.5
Ventrolateral preoptic nucleusipsiVLPO-0.5
Ventromedial preoptic nucleusipsiVMPO-0.5
Dorsomedial hypothalamic nucleusipsiDMHy0
Lateral zoneipsiLHA0
Lateral hypothalamic areaipsiLH-0.5
Lateral hypothalamic nucleusipsiLHN0.5
Lateral hypothalamic area [Lateral zone mammillary level]ipsiLHLZM1
Anterior hypothalamic nucleus rostral zoneipsiAHnR0
Ventromedial hypothalamic nucleus shellipsiVMS-0.5
Paraventricular hypothalamic nucleusipsiPa-0.5
Supraoptic nucleus [Supraoptic region]ipsiSO2
Nucleus properipsiSOnP1
Perinuclear zone dorsal to the supraoptic regionipsiSoRpnzd1
Posterior mammillay nucleus anterolateral partipsiPMAMaL0
Premammillary nucleusipsiPMAN-0.5
ThalamusipsiT2
Anterior group of the dorsal thalamusipsiATN-0.5
Anterodorsal thalamic nucleusipsiAD-0.5
Anteromedial thalamic nucleusipsiAM-0.5
Anteroventral thalamic nucleusipsiAV-0.5
Lateral anterior nucleus of the thalamusipsiLATN-0.5
Paratenial thalamic nucleusipsiPT-0.5
Paraventricular thalamic nucleusipsiPV-0.5
Reuniens thalamic nucleusipsiRe-0.5
Medial thalamic zoneipsiMTZ-0.5
Lateral habenular nucleusipsiLHb4
Amygdaloid complexipsiAC-1
Bed nucleus of the stria terminalisipsiBST-0.5
Central amygdaloid nucleusipsiCe1
Posterior amygdaloid nucleusipsiCOAp-0.5
Medial extreme of the caudal periamygdaloid cortexipsiMePACC-0.5
Lateral globus pallidusipsiLGP0
Peripallidal regionipsiPePa0
Subpallidal regionipsiSuPa0
StriatumipsiSTR4
Accumbens nucleusipsiAc2
Accumbens nucleus coreipsiAcbC3
Caudate putamenipsiCPu-0.5
Dorsomedial striatumipsiCPudm-0.5
Ventral striatumipsiCPuv-0.5
Dorsal hippocampusipsiHIPPd-0.5
Dentate gyrusipsiDG3
Rostral dentate gyrus medial part molecular layeripsiDGrMmo-1
Inner molecular layer of the dentate gyrusipsiIMLDG3
SubiculumipsiS-0.5
PostsubiculumipsiPost-0.5
Entorhinal cortexipsiEnt-0.5
Medial entorhinal cortexipsiMEnt-0.5
Dorsal retrosplenial cortex caudal partipsiRSdc-0.5
Retrosplenial agranular cortexipsiRSA1
Retrosplenial granular cortexipsiRSGra-0.5
Cingulate cortexipsiCg-0.5
Anterior cingulate cortexipsiACC-0.5
Anterior cingulate cortex caudal part layer 1ipsiACCcL1-0.5
Middle cingulate cortexipsiMCC-0.5
Posterior cingulate cortexipsiPCC-0.5
Prelimbic cortexipsiPrL3
Retrolimbic areaipsiReLA0
NeocortexipsiNEOCX4
Frontal association cortexipsiFrA-0.5
Parietal association cortexipsiPtA2
Parietal cortex posterior area lateral portionipsiParPL0
Temporal association area 2 caudal partipsiTe2C-0.5
Auditory regionsipsiAU0
Dysgranular insular cortexipsiDI0
Granular insular cortexipsiGI0
Perirhinal cortex upper partipsiPRhu-0.5
Prefrontal cortexipsiPFC-0.5
Prefrontal cortex dorsomedial partipsiPFCdm-0.5
Lateral prefrontal cortexipsilPFC-0.5
Lateral agranular prefrontal cortexipsiAGl0
Medial prefrontal cortexipsimPFC3
Primary somatosensory cortexipsiS10
Ventral medial prefrontal cortexipsivmPFC-0.5
Primary visual cortexipsiV10
Primary visual cortex layer 5ipsiV1L5-0.5
Primary visual cortex layer 6ipsiV1L6-0.5
Secondary visual cortex lateral areaipsiV2L-0.5
Anterior medial frontal cortexipsiAMFC-0.5
Precommissural nucleusipsiPrC0
Accessory olfactory bulbipsiAOB-0.5
Olfactory tubercleipsiTuO-1
Septal regionipsiSER-0.5
Lateral septal nucleusipsiLS3
Lateral septal nucleus caudal partipsiLSc-0.5
Lateral septal nucleus rostral partipsiLSr3
Mid-lateral septumipsimiLS3
Posterior septal complexipsiPSC-0.5
Septofimbrial nucleusipsiSFi3
Lateral ventricleipsiLV-0.5
Cervical segment 1ipsiCS10
Cervical segment 2ipsiCS20
Retrotrapezoid nucleuscontraRTN0
Medial septal nucleuscontraMS2
Lateral globus palliduscontraLGP0
StriatumcontraSTR2
Accumbens nucleuscontraAc3
Caudate putamencontraCPu0
Dorsomedial striatum dorso-caudal partcontraCPudmdc1
Dorsomedial striatum rostral partcontraCPudmr0
Dorsomedial striatum ventro-caudal partcontraCPudmvc0
Dorsolateral striatum central partcontraCPudlC0
Dorsolateral striatum dorsal partcontraCPudlD0
Dorsolateral striatum ventral partcontraCPudlV0
Ventral striatum caudal partcontraCPuvca0
Ventral striatum rostral partcontraCPuvro1
HippocampuscontraHIPP-0.5
Dorsal hippocampuscontraHIPPd1
Dentate gyruscontraDG-0.5
Dentate gyrus molecular layercontraDGmL3
Hilar mossy cellscontraHilmc-0.5
Field CA1 of hippocampuscontraCA1-0.5
Field CA1 of hippocampus layer stratum radiatumcontraCA1rad1
Field CA1 of hippocampus layer stratum pyramidalecontraCA1pyr1
Field CA1 of hippocampus layer stratum orienscontraCA1or3
Field CA2 of hippocampuscontraCA20
Field CA3 of hippocampuscontraCA3-0.5
Field CA3 of hippocampus layer stratum pyramidalecontraCA3pyr1
Field CA3 of hippocampus layer stratum orienscontraCA3or3
Field CA3a of hippocampuscontraCA3a0
Field CA3b of hippocampuscontraCA3b0
SubiculumcontraS0
Entorhinal cortexcontraEnt-0.5
Medial entorhinal cortexcontraMEnt-10
NeocortexcontraNEOCX2
Parietal association cortexcontraPtA2
Prefrontal cortexcontraPFC-0.5
Medial prefrontal cortexcontramPFC0
Anterior medial frontal cortexcontraAMFC-0.5
Olfactory tuberclecontraTuO3
Septal regioncontraSER-0.5
Lateral septal nucleuscontraLS2
Cervical segment 1contraCS10
Cervical segment 2contraCS20
Posterior cricoarytenoid muscleipsiMuscPCA1
Femoral bone marrowipsiOrgSkFemM2

Input from

NameSideAbbr.WeightDetails
Central gray ventral areaipsiCGva1
Ventral periaqueductal grayipsiVPAG-0.5
Substantia nigra A9ipsiSN-0.5
Substantia nigra compact partipsiSNC-0.5
Ventral tegmental area A10ipsiVTA2
Ventral tegmental area A10 caudal partipsiVTAcp1
Ventral tegmental area A10 lateral nucleiipsiVTALN0
Ventral tegmental area A10 lateral partipsiVTAL0
Ventral tegmental area A10 medial nucleiipsiVTAmn0
Interfascicular nucleusipsiIF0
Ventral tegmental tailipsiVTTa0
Ventral tegmental area posterior partipsiVTAP1
Paranigral nucleusipsiPN0
Caudal linear nucleus of the rapheipsiCLi-0.5
Lateral tegmental nucleusipsiLTN1
Laterodorsal tegmental nucleusipsiLDTg1
Dorsal tegmental nucleusipsiDTg0
Dorsal tegmental nucleus ventromedial partipsiDTgVM-0.5
Regions surrounding the dorsal tegmental nucleus of GuddenipsiTGAGrs-0.5
Pedunculopontine tegmental nucleusipsiPPTg1
A4 noradrenaline cellsipsiA4-0.5
Barringtons nucleusipsiBar0
Locus coeruleusipsiLC3
Intermediate part of the anterior pole of the locus coeruleusipsiLCimap3
Dorsal part of the anterior pole of the locus coeruleusipsiLCda3
Locus coeruleus caudal partipsiLCca3
Locus coeruleus dorsal partipsiLCD3
Locus coeruleus dorsomedial partipsiLCdm3
Ventral part of the posterior pole of the locus coeruleusipsiLCvp0
Intermediate part of the posterior pole of the locus coeruleusipsiLCip3
Dorsal part of the posterior pole of the locus coeruleusipsiLCdp3
Locus coeruleus rostral partipsiLCRo1
Locus coeruleus rostrocaudal extentipsiLCrcE-0.5
Nucleus incertus pars compactaipsiNIc3
Nucleus incertus pars dissipataipsiNId3
Pontine reticular nucleusipsiPRN1
Cuneiforme nucleusipsiCnF0
Parabrachial nucleus medialipsiPBnMe2
Lateral reticular nucleusipsiLRt0
Principal sensory trigeminal nucleusipsiPr5-0.5
Principal sensory trigeminal nucleus dorsal partipsiPr5D0
Raphe nucleiipsiRAN2
Dorsal raphe nucleusipsiDR3
Dorsal raphe nucleus caudal partipsiDRC3
Dorsal raphe nucleus caudal part non serotoninergic populationipsiDRCnsp0.5
Dorsal raphe nucleus dorsal part non serotoninergic populationipsiDRDnsp0.5
Dorsal raphe nucleus dorsomedial subdivisionipsiDRdm1
Dorsal raphe nucleus interfascicular part non serotoninergic populationipsiDRInsp0.5
Dorsal raphe nucleus lateral wing non serotoninergic populationipsiDRIwnsp0.5
Dorsal raphe nucleus midrostrocaudal part non serotoninergic populationipsiDRmrcnsp0.5
Dorsal raphe nucleus rostral partipsiDRr0
Dorsal raphe nucleus rostral part non serotoninergic populationipsiDRrnsp0.5
Dorsal raphe nucleus ventral partipsiDRV1
Dorsal raphe nucleus ventral part non serotoninergic populationipsiDRVnsp0.5
Dorsal raphe nucleus ventrolateral part non serotoninergic populationipsiDRVLnsp0.5
Dorsal raphe nucleus ventromedial subdivisionipsiDRvme3
Median raphe nucleusipsiMnR3
Medial raphe nucleusipsiMeR-0.5
Superior central raphe nucleusipsiCS3
Superior central raphe nucleus medial partipsiCSm3
Caudal nucleus raphe centralis superioripsiCSca3
Cranial nucleus raphe centralis superioripsiCSCr1
Median raphe nucleus caudal portionipsiMnRc-0.5
B9 serotonin cellsipsiB9-1
B6 subnucleusipsiB63
Isthmus region of the rapheipsiRANi1
Caudal ventrolateral medullaipsiCVLM0
Rostral ventrolateral medullaipsiRVLM-0.5
Basal forebrainipsiBAF-0.5
Endopiriform systemipsiEnN-1
Caudal endopiriform regionipsiCEn-0.5
Central endopiriform systemipsiCEnN-0.5
Rostral endopiriform regionipsiREn-0.5
Medial septum dorsal band complexipsiMSDB-0.5
Diagonal band of BrocaipsiDBB-0.5
Nucleus of the diagonal band of Broca ventral partipsiVDBV-0.5
Nucleus of the horizontal limb of the diagonal bandipsiHDB2
Nucleus of the horizontal limb of the diagonal band medial partipsiHDBm-0.5
Nucleus of the horizontal limb of the diagonal band middle partipsiHDBmi-0.5
Nucleus of the horizontal limb of the diagonal band rostral partipsiRPHDB-0.5
Nucleus of the vertical limb of the diagonal bandipsiVDB3
Nucleus of the vertical limb of the diagonal band dorsal partipsiVDBDo-0.5
Nucleus of the vertical limb of the diagonal band middle portionipsiVDBMi-0.5
Nucleus of the vertical limb of the diagonal band multipolar cellsipsiVDBmpc-0.5
Nucleus of the vertical limb of the diagonal band bipolar cellsipsiVDBbpc-0.5
Nucleus of the vertical limb of the diagonal band intermediate cellsipsiVDBimc-0.5
Vertical portion of the diagonal band of BrocaipsiDBBver3
Medial septal nucleusipsiMS4
Dorsal ChAT groupipsiMSDC2
Intermediate ChAT groupipsiMSiMC2
Medial non-ChAT groupipsiMSmnC1
Medial septal nucleus lateral part multipolar cellsipsiMSLamp-0.5
Medial septal nucleus medial partipsiMSm-0.5
Midline ChAT groupipsiMSMiC1
Ventral ChAT groupipsiMSVC1
Medial septal nucleus bipolar cellsipsiMSbpc-0.5
Medial septal nucleus intermediate cellsipsiMSimc1
Rostrocaudal levels of the medial septum dorsal band complexipsiRCMSDB-0.5
Basal nucleus MeynertipsiB4
Substantia innominataipsiSI0.5
Substantia innominata medial partipsiSIme-0.5
Medial basal forebrainipsiMBAF-0.5
Lateral preoptic areaipsiLPO0.5
Medial preoptic areaipsiMPA1
Magnocellular preoptic nucleusipsiMCPO-0.5
Medial preoptic nucleusipsiMPO1
Tuberomammillary nucleusipsiTuM2
Tuberomammillary nucleus diffuse partipsiTuMdif0.5
Tuberomammillary nucleus medial partipsiTuMM0.5
Ventral tuberomammillary nucleusipsiVTM1
Dorsomedial hypothalamic nucleusipsiDMHy1
Caudal part of the dorsomedial hypothalamic nucleusipsiDMHyC1
Dorsomedial hypothalamic nucleus extreme peripheryipsiDMHyep1
Lateral zoneipsiLHA1
Lateral hypothalamic areaipsiLH1
Lateral hypothalamic area perifornical partipsiPFx1
Lateral hypothalamic area rostral partipsiLHro-0.5
Tuberal division of the lateral hypothalamic areaipsiLHTC1
Mediobasal hypothalamusipsiMeHypo-0.5
Medial zoneipsiMHA-0.5
Anterior hypothalamic nucleusipsiAHn1
Dorsal hypothalamic areaipsiDA1
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM1
Dorsomedial hypothalamic nucleus dorsomedial partipsiDMDM1
Dorsomedial hypothalamic nucleus ventral partipsiDMV-0.5
Peripheral part of the dorsomedial hypothalamic nucleusipsiDMpe-0.5
Posterior hypothalamic areaipsiPHA1
Posterior hypothalamic nucleusipsiPH-0.5
Ventromedial hypothalamic nucleusipsiVMH1
Ventromedial hypothalamic nucleus central partipsiVMHC1
Ventromedial hypothalamic nucleus dorsomedial partipsiVMHDM3
Ventromedial hypothalamic nucleus perinuclear zoneipsiVMHpnz-0.5
Ventromedial hypothalamic nucleus posterior partipsiVMHP1
Ventromedial hypothalamic nucleus shellipsiVMS4
Ventromedial hypothalamic nucleus ventrolateral partipsiVMHVL3
Periventricular zoneipsiPVZ1
Arcuate nucleusipsiArc1
Paraventricular hypothalamic nucleusipsiPa-0.5
Periventricular hypothalamic nucleusipsiPe3
Supraoptic regionipsiSoR1
Supraoptic nucleus [Supraoptic region]ipsiSO1
Mammillary bodyipsiCMAM1
Principal part of the mammillothalamic tract in the supramammillary regionipsipmt3
Medial mammillary nucleusipsiMMn-0.5
Medial mammillary nucleus lateral partipsiML3
Premammillary nucleusipsiPMAN-1
Premammillary nucleus dorsal partipsiPMD1
Premammillary nucleus ventral partipsiPMV1
Submammillothalamic nucleusipsiSMT-0.5
Supramammillar nucleusipsiSuM3
Supramammillar nucleus lateral partipsiSuML3
Midline of the supramammillary regionipsiSuMmi1
A11 dopamine cellsipsiA110
A13 dopamine cellsipsiA130
A8 dopamine cells retrorubral groupipsiRRF0
Rostral periventricular cell groupipsiA140
Tuberal cell group located in the arcuate nucleus and in the adjacent part of the periventricular nucleusipsiA120
Perifornical nucleusipsiPeF3
Retrochiasmatic areaipsiRCh1
ThalamusipsiT0.5
Dorsal thalamusipsiDOR-0.5
Anterior group of the dorsal thalamusipsiATN0
Anterodorsal thalamic nucleusipsiAD-0.5
Anteromedial thalamic nucleusipsiAM3
Anteroventral thalamic nucleusipsiAV-0.5
Lateral anterior nucleus of the thalamusipsiLATN-0.5
Central medial thalamic nucleusipsiCM-0.5
Centrolateral thalamic nucleusipsiCL-0.5
Rhomboid thalamic nucleusipsiRh1
Rhomboid thalamic nucleus posterior partipsiRhP0.5
Paratenial thalamic nucleusipsiPT3
Paratenial thalamic nucleus ventrolateral partipsiPTvL1
Paraventricular thalamic nucleusipsiPV3
Paraventricular thalamic nucleus anterior partipsiPVA0.5
Reuniens thalamic nucleusipsiRe3
Nucleus reuniens rostral divisionipsiRER1
Nucleus reuniens rostral division dorsal partipsiRERd-0.5
Reuniens thalamic nucleus lateral partipsiReL-0.5
Reuniens thalamic nucleus medial partipsiReMe1
Reuniens thalamic nucleus ventral partipsiReV-0.5
Reuniens thalamic nucleus rostrocaudal extentipsiReRC-0.5
Reuniens thalamic nucleus rostral partipsiReRo-0.5
Subfornical organipsiSFO-2
Ventromedial thalamic nucleusipsiVM1
Lateral thalamic nuclear groupipsiLTNG-0.5
Reticular thalamic nucleusipsiRt-0.5
Zona incertaipsiZI3
Retinal ganglion cellsipsiRETg3
Medial border Of the internal capsuleipsiicmb3
Lateral forebrain bundleipsilfbb-0.5
Medial forebrain bundleipsimfb-0.5
Basal nucleusipsiBnc2
Accessory basal nucleusipsiAB2
Basal nucleus magnocellular partipsiBmc2
Basal magnocellular nucleus rostral poleipsiBmcR4
Anterior basolateral nucleusipsiBLA1
Caudal portion of the magnocellular basal nucleusipsiBncC0.5
Lateral amygdaloid nucleusipsiLA-0.5
Bed nucleus of the stria terminalis dorsal nucleusipsiBSTd1
Central amygdaloid nucleusipsiCe0
Amygdalopiriform transition areaipsiAPir-0.5
Nucleus of the lateral olfactory tractipsiLOT0
Medial amygdaloid nucleusipsiMe-1
Medial amygdaloid nucleus anterodorsal partipsiMeAD1
Intercalated nuclei of the amygdalaipsiI0
Globus pallidusipsiGP0.5
Medial globus pallidusipsiMGP-0.5
Peripallidal regionipsiPePa0
Subpallidal regionipsiSuPa0
Ventral pallidumipsiVP-0.5
Accumbens nucleusipsiAc1
Medial accumbensipsiAcbM-0.5
Dorsal hippocampusipsiHIPPd-0.5
Dentate gyrusipsiDG-0.5
Field CA1 of hippocampusipsiCA13
Field CA1 of hippocampus dorsalipsiCA1d-0.5
Field CA2 of hippocampusipsiCA23
Field CA3 of hippocampusipsiCA33
Field CA3 of hippocampus layer stratum pyramidale pyramidal neuronsipsiCA3L3spy-0.5
SubiculumipsiS-0.5
Subiculum posterior partipsiSupo-0.5
Ventral psalteriumipsivps-2
Entorhinal cortexipsiEnt3
Entorhinal cortex deep layersipsiEntdL1
Entorhinal cortex layer 6ipsiEntL6-0.5
Entorhinal cortex layer 3ipsiEntL33
Entorhinal cortex layer 3 stellate cellsipsiEntL3SC-0.5
Entorhinal cortex layer 3 pyramid-like cellsipsiEntL3PC-0.5
Entorhinal cortex layer 3 multipolar cellsipsiEntL3MuC-0.5
Entorhinal cortex layer 3 horizontal cellsipsiEntL3HC-0.5
Entorhinal cortex layer 3 pyramidal cellsipsiEntL3py-0.5
Entorhinal cortex layer 4ipsiEntL4-0.5
Entorhinal cortex layer 2ipsiEntL23
Entorhinal cortex layer 2 stellate cellsipsiEntL2SC-0.5
Entorhinal cortex layer 2 pyramid-like cellsipsiEntL2PC-0.5
Entorhinal cortex layer 2 multipolar cellsipsiEntL2MuC-0.5
Entorhinal cortex layer 2 horizontal cellsipsiEntL2HC-0.5
Intermediate entorhinal cortex layer 2ipsiIEntL2-0.5
Intermediate entorhinal cortex superficial layer 3ipsiIEntsL3-0.5
Lateral entorhinal cortexipsiLEnt-0.5
Lateral entorhinal cortex layer 2ipsiLEntL23
Lateral entorhinal cortex layer 3ipsiLEntL31
Lateral entorhinal cortex deep layersipsiLEntDL-0.5
Lateral entorhinal cortex superficial layer 5ipsiLEntsL50.5
Lateral entorhinal cortex deep layer 5ipsiLEntL5b0.5
Lateral entorhinal cortex layer 6ipsiLEntL60.5
Area 28L layer 2ipsiLEnt28LL2-0.5
Area 28L superficial layer 3ipsiLEnt28LsL3-0.5
Area 28L'ipsiLEntL'0.5
Medial entorhinal cortexipsiMEnt-0.5
Medial entorhinal cortex dorsal partipsiMEntD3
Medial entorhinal cortex layer 2ipsiMEntLyL2-0.5
Medial entorhinal cortex layer 2 stellate neuronsipsiMEntLyL2st-0.5
Medial entorhinal cortex layer 3ipsiMEntLyL3-0.5
Medial entorhinal cortex layer 3 pyramidal neuronsipsiMEntLyL3py-0.5
Medial entorhinal cortex deep layersipsiMEntDLy-0.5
Medial entorhinal cortex layer 5aipsiMEntLyL5a0.5
Medial entorhinal cortex deep layer 5ipsiMEntLyL5b0.5
Medial entorhinal cortex layer 6ipsiMEntLyL60.5
Area 28M layer 2ipsiMEnt28ML2-0.5
Area 28M superficial layer 3ipsiMEnt28MsL3-0.5
Area 28M'ipsiMEnt28M'0.5
Area TRipsiEntTR0.5
Retrosplenial cortexipsiRSCx-0.5
Retrosplenial granular cortex subdivisionsipsiRSGsu0
Cingulate cortexipsiCg-0.5
Anterior cingulate cortexipsiACC-0.5
Cingulate cortex area 1 caudal partipsiCg1c0
Cingulate cortex area 2 caudal partipsiCg2c0
Posterior cingulate cortexipsiPCC1
Prelimbic cortex dorsal partipsiPrLd0
Prelimbic cortex ventral partipsiPrLv0
Infralimbic cortexipsiIL0
Frontal cortex area 2ipsiFr20
Perirhinal cortexipsiA351
Perirhinal cortex anterior portion layer 6ipsiPRhaL60
Perirhinal cortex deep part of the superficial layer 2ipsiPRhdsL2-0.5
Perirhinal cortex layer 3ipsiA35L3-0.5
Deep part of the superficial portion pf perirhinal cortex layer 3ipsiPRhL3ds-0.5
Perirhinal cortex layer 5ipsiA35L50
Perirhinal cortex layer 6ipsiA35L60
Medial prefrontal cortexipsimPFC0
Commissural systemsipsicos-0.5
Interpeduncular nucleusipsiIP-0.5
Interpeduncular nucleus apical subnucleusipsiIPA2
Interpeduncular nucleus caudal portion dorsal aspectipsiIPCD-0.5
Interpeduncular nucleus dorsal subnucleus caudal portionipsiIPRdc-1
Interpeduncular nucleus dorsal subnucleus magnocellular partipsiIPRm3
Interpeduncular nucleus lateral subnucleusipsiIPL-1
Interpeduncular nucleus lateral subnucleus caudal partipsiIPLc2
Olfactory tubercleipsiTuO1
Septal regionipsiSER2
Lateral septal nucleusipsiLS-2
Lateral septal nucleus caudal partipsiLSc1
Lateral septal nucleus dorsal partipsiLSD1
Lateral septal nucleus intermediate partipsiLSI0
Lateral septal nucleus rostral partipsiLSr1
Lateral septal nucleus rostral part dorsolateral zoneipsiLSrdl1
Ventrally lateral septal nucleus rostral part medial zoneipsiLSrmV1
Lateral septal nucleus ventral partipsiLSV1
Anteroposterior extension of the lateral septal nucleusipsiLSap0
Ventroposterior extension of the lateral septal nucleusipsiLSvp0
Septofimbrial nucleusipsiSFi1
Triangular septal nucleusipsiTS-2
Medial septal regionipsiMSER-0.5
Ventral tegmental area A10contraVTA0
Locus coeruleuscontraLC1
Locus coeruleus dorsal partcontraLCD2
Median raphe nucleuscontraMnR3
Diagonal band of BrocacontraDBB-0.5
Nucleus of the vertical limb of the diagonal bandcontraVDB1
Medial septal nucleuscontraMS1
Medial septal nucleus lateral part multipolar cellscontraMSLamp-0.5
Rostrocaudal levels of the medial septum dorsal band complexcontraRCMSDB-0.5
Basal nucleus MeynertcontraB-0.5
Magnocellular preoptic nucleuscontraMCPO-0.5
Tuberomammillary nucleuscontraTuM1
Tuberomammillary nucleus diffuse partcontraTuMdif0.5
Tuberomammillary nucleus medial partcontraTuMM0.5
Ventral tuberomammillary nucleuscontraVTM0.5
Caudal part of the dorsomedial hypothalamic nucleuscontraDMHyC1
Lateral hypothalamic areacontraLH-0.5
Lateral hypothalamic area perifornical partcontraPFx-0.5
Tuberal division of the lateral hypothalamic areacontraLHTC1
Dorsal hypothalamic areacontraDA-0.5
Principal part of the mammillothalamic tract in the supramammillary regioncontrapmt1.5
Supramammillar nucleuscontraSuM1
Perifornical nucleuscontraPeF1
Rhomboid thalamic nucleuscontraRh-0.5
Paratenial thalamic nucleuscontraPT-0.5
Paraventricular thalamic nucleuscontraPV-0.5
Reuniens thalamic nucleuscontraRe1
Ventromedial thalamic nucleuscontraVM-0.5
Reticular thalamic nucleuscontraRt-0.5
Zona incertacontraZI1
Medial border Of the internal capsulecontraicmb1
Medial accumbenscontraAcbM-0.5
HippocampuscontraHIPP-0.5
Granular cells of the hippocampuscontraHIPgr0
Polymorph layer of the dentate gyruscontraDGpo-0.5
Hilus of the dentate gyruscontraHil3
Hilar cellscontraHilc3
Dentate gyrus mossy cellscontraDGPomo-0.5
Field CA1 of hippocampus layer stratum pyramidalecontraCA1pyr0
Field CA2 of hippocampus layer stratum secondary axon of commissural fibers of pyramidale pyramidal cellscontraCA2L3scfpy-0.5
Field CA3 of hippocampuscontraCA3-0.5
Field CA3 of hippocampus layer stratum pyramidalecontraCA3pyr-0.5
Field CA3 of hippocampus layer stratum pyramidale pyramidal neuronscontraCA3L3spy-0.5
Field CA3 of hippocampus granule cellscontraCA3Lgc-0.5
Field CA3c of hippocampus pyramidal cellscontraCA3cPC-0.5
Field CA3c of hippocampus inverted fusiform cellscontraCA3cif-0.5
Field CA3a of hippocampus pyramidal cell layer secondary axon from commissural fibers of pyramidal cellscontraCA3aLcfpyc-0.5
Field CA4 of hippocampuscontraCA4-0.5
Entorhinal cortexcontraEnt-0.5
Medial entorhinal cortex layer 3contraMEntLyL3-0.5
Entorhinal cortex layer 3contraEntL3-0.5
Entorhinal cortex layer 3 stellate cellscontraEntL3SC1
Entorhinal cortex layer 3 pyramid-like cellscontraEntL3PC1
Entorhinal cortex layer 3 multipolar cellscontraEntL3MuC1
Entorhinal cortex layer 3 horizontal cellscontraEntL3HC1
Entorhinal cortex layer 4contraEntL4-0.5
Entorhinal cortex layer 2contraEntL2-0.5
Entorhinal cortex layer 2 stellate cellscontraEntL2SC1
Entorhinal cortex layer 2 pyramid-like cellscontraEntL2PC1
Entorhinal cortex layer 2 multipolar cellscontraEntL2MuC1
Entorhinal cortex layer 2 horizontal cellscontraEntL2HC1
Perirhinal cortex layer 3contraA35L3-0.5
Hindpaw skinipsiOrgHPS-0.5
Nasal cavityipsiOrgNaCa2
Hindpaw skincontraOrgHPS-0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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