University of Rostock

Department of Anatomy

Neuroscience Group

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Rat connectome



Peripeduncular area right


Abbreviation
PPA
Color       
Superior regionsVentral midbrain tegmentum

SynonymsAbbr.Language
Peripeduncular region  
Peripeduncular areaPPAEng

SubregionsSide
Laterodorsal division of peripeduncular arearight
Peripeduncular nucleusright

Output to

NameSideAbbr.WeightDetails
Dorsal nucleus of the lateral lemniscuscontraDLL0
Ventral nucleus of the lateral lemniscuscontraVLL0
Medial division of the caudal inferior colliculuscontraICOLCM1
Ventral division of the caudal inferior colliculuscontraICOLCV1
Central sector of the central gray of the superior colliculuscontraccgSC1
Dorsal sector of the central gray of the superior colliculuscontradcgSC2
Medial half of the intermediate layers of the superior colliculuscontraSCimh0
Medial part of deep gray layer of the superior colliculuscontraMDpG1
Laterodorsal tegmental nucleuscontraLDTg0
Pedunculopontine tegmental nucleuscontraPPTg0
Cuneiforme nucleus rostrocaudal extentcontraCnFrc2
Dorsal raphe nucleuscontraDR0
Basal nucleus MeynertcontraB0
Medial preoptic areacontraMPA0
Tuberomammillary nucleus dorsomedial partcontraTBMdm-0.5
Ventral tuberomammillary nucleuscontraVTM-0.5
Glia limitans ventral to the ventral tuberomammillary nucleuscontraTuMgL-0.5
Dorsomedial hypothalamic nucleuscontraDMHy-0.5
Lateral hypothalamic areacontraLH1
Lateral hypothalamus adjacent to the ventral tuberomammillary nucleuscontraLHVTM-0.5
Posterior hypothalamic nucleuscontraPH0
Ventromedial hypothalamic nucleuscontraVMH1
Arcuate nucleuscontraArc2
Lateral mammillary nucleuscontraLM-0.5
Premammillary nucleus dorsal partcontraPMD-0.5
Premammillary nucleus ventromedial partcontraPMvm-0.5
Supramammillar nucleus lateral partcontraSuML-0.5
Suprageniculate thalamic nucleuscontraSG0
Lateral posterior thalamic nucleuscontraLP0
Subparafascicular thalamic nucleus caudal partcontraSPFc0.5
Subparafascicular thalamic nucleus medial partcontraSPFme0.5
Subparafascicular thalamic nucleus rostral partcontraSPFr0.5
Zona incertacontraZI0
Lateral nucleus caudal partcontraLAcap0
Central amygdaloid nucleuscontraCe0
Globus palliduscontraGP0
Caudal striatumcontraCPuc0
Temporal association cortex 1contraTeA0
Ventral temporal association cortex layer 5contraTevL50
Area 13 layer 5contraA13L50
Central grayipsiCG1
Dorsal nucleus of the lateral lemniscusipsiDLL1
Ventral nucleus of the lateral lemniscusipsiVLL1
Medial division of the caudal inferior colliculusipsiICOLCM2
Ventral division of the caudal inferior colliculusipsiICOLCV2
Central sector of the central gray of the superior colliculusipsiccgSC1
Dorsal sector of the central gray of the superior colliculusipsidcgSC3
Medial half of the intermediate layers of the superior colliculusipsiSCimh0
Medial part of deep gray layer of the superior colliculusipsiMDpG3
Substantia nigra A9ipsiSN-3
Ventral tegmental area A10ipsiVTA1
Laterodorsal tegmental nucleusipsiLDTg0
Pedunculopontine tegmental nucleusipsiPPTg1
Cuneiforme nucleus rostrocaudal extentipsiCnFrc3
Dorsal raphe nucleusipsiDR0
Basal nucleus MeynertipsiB3
Substantia innominata dorsal partipsiSID1
Lateral preoptic areaipsiLPO-0.5
Medial preoptic areaipsiMPA-0.5
Tuberomammillary nucleus dorsomedial partipsiTBMdm2
Ventral tuberomammillary nucleusipsiVTM2
Glia limitans ventral to the ventral tuberomammillary nucleusipsiTuMgL2
Dorsomedial hypothalamic nucleusipsiDMHy2
Lateral hypothalamic areaipsiLH1
Lateral hypothalamus adjacent to the ventral tuberomammillary nucleusipsiLHVTM2
Medial division of the hypothalamusipsiMdH1
Anterior hypothalamic areaipsiAHA-0.5
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM-0.5
Posterior hypothalamic areaipsiPHA-0.5
Posterior hypothalamic nucleusipsiPH0
Ventromedial hypothalamic nucleusipsiVMH3
Ventromedial hypothalamic nucleus central partipsiVMHC4
Ventromedial hypothalamic nucleus shellipsiVMS1
Mediobasal hypothalamus anterior partipsiMeHypoAnt0.5
Mediobasal hypothalamus posterior partipsiMeHypoP0.5
Arcuate nucleusipsiArc2
Dorsomedial hypothalamic nucleus [Periventricular zone]ipsiDMpz-3
Paraventricular hypothalamic nucleusipsiPa1
Periventricular hypothalamic nucleusipsiPe0.5
Medial hypothalamic groupipsiMHYPOg-1
Lateral mammillary nucleusipsiLM2
Premammillary nucleus dorsal partipsiPMD2
Premammillary nucleus ventromedial partipsiPMvm2
Supramammillar nucleus lateral partipsiSuML2
Retrochiasmatic areaipsiRCh3
Parafascicular thalamic nucleusipsiPF-1
Suprageniculate thalamic nucleusipsiSG0
Midline group of the dorsal thalamusipsiMTN-0.5
Lateral posterior thalamic nucleusipsiLP0
Subparafascicular thalamic nucleusipsiSPF1
Subparafascicular thalamic nucleus caudal partipsiSPFc2
Subparafascicular thalamic nucleus medial partipsiSPFme2
Subparafascicular thalamic nucleus rostral partipsiSPFr2
Zona incertaipsiZI1.5
Antero-polar part of zona incertaipsiZIAP-0.5
Zona incerta caudal partipsiZIC1
Zona incerta ventral partipsiZIV1
Ventral half of the pars ventralis of the zona incertaipsiZIVHh-0.5
Amygdaloid complexipsiAC2
Basolateral amygdaloid nucleusipsiBL-0.5
Basolateral nucleus rostral partipsiBLRP-0.5
Lateral amygdaloid nucleusipsiLA2.5
Dorsolateral part of the lateral nucleusipsiLaDL-0.5
Lateral nucleus caudal partipsiLAcap1
Lateral nucleus ventral portionipsiLAVp-0.5
Bed nucleus of the stria terminalis lateral divisionipsiBSTL1
Bed nucleus of the stria terminalis medial divisionipsiBSTM1
Central amygdaloid nucleusipsiCe2.5
Central amygdaloid nucleus lateral divisionipsiCeL-0.5
Central amygdaloid nucleus medial divisionipsiCeM-0.5
Interstitial nucleus of the posterior limb of the anterior commissure medial partipsiIPACM1
Anterior amygdaloid areaipsiAA-0.5
Nucleus of the lateral olfactory tractipsiLOT-3
Medial amygdaloid nucleusipsiMe-3
Area X of Hall and Geneser-JensenipsiAXHGJ-0.5
Globus pallidusipsiGP3
Caudal globus pallidusipsiGPc3
Caudal globus pallidus adjacent to internal capsuleipsiGPcaic-0.5
Caudate putamenipsiCPu-0.5
Caudal striatumipsiCPuc3
Central caudal striatumipsiCPucc3
Medial region of the caudal striatumipsiCPumc3
Fundus of the striatumipsiFS-0.5
Temporal association area 2ipsiTe22
Temporal association area 3ipsiTe32
Temporal association cortex 1ipsiTeA0
Ventral temporal association cortexipsiTev2
Ventral temporal association cortex layer 5ipsiTevL50
Area 13 layer 5ipsiA13L50
Lateral septal nucleus ventral partipsiLSV1
Adrenal glandipsiADRE-0.5
Gastrocnemius muscleipsiMuscGC-0.5

Input from

NameSideAbbr.WeightDetails
Dorsal nucleus of the lateral lemniscuscontraDLL1
Ventral nucleus of the lateral lemniscuscontraVLL0
Inferior colliculus medial part rostrocaudal partcontraICOLmrc1
Central sector of the central gray of the superior colliculuscontraccgSC1
Dorsal sector of the central gray of the superior colliculuscontradcgSC2
Superior colliculus intermediate layerscontraSCi1
Superior colliculus deep layerscontraSCd2
Laterodorsal tegmental nucleuscontraLDTg1
Dorsal tegmental nucleuscontraDTg1
Dorsal tegmental nucleus lateral partcontraDLTN1
Pedunculopontine tegmental nucleuscontraPPTg0
Cuneiforme nucleuscontraCnF2
Dorsal raphe nucleuscontraDR1
Basal nucleus MeynertcontraB0
Medial preoptic areacontraMPA0
Lateral hypothalamic areacontraLH1
Posterior hypothalamic nucleuscontraPH1
Ventromedial hypothalamic nucleus dorsomedial partcontraVMHDM1.5
Ventromedial hypothalamic nucleus ventrolateral partcontraVMHVL1.5
Suprageniculate thalamic nucleuscontraSG0
Lateral posterior thalamic nucleus dorsomedial sectorcontraLPdm0
Antero-polar part of zona incertacontraZIAP0
Postero-polar part of zona incertacontraZIPo0
Zona incerta ventral partcontraZIV0
Narrow band bordered dorsally by the internal capsule and ventrally by optic tractcontraicot0
Lateral amygdaloid nucleuscontraLA0
Central amygdaloid nucleuscontraCe0
Caudal globus palliduscontraGPc0
Caudoventral striatumcontraCPucv0
Temporal association cortex 1 layer 5contraTeAL50
Ventral temporal association cortex layer 5contraTevL50
Area 13 layer 5contraA13L50
Dorsal nucleus of the lateral lemniscusipsiDLL2
Ventral nucleus of the lateral lemniscusipsiVLL0
Dorsolateral periaqueductal grayipsiDLPAG4
Inferior colliculusipsiICOL2
Central nucleus of the inferior colliculusipsiCIC0
External cortex of the inferior colliculusipsiECIC-1
Inferior colliculus medial part rostrocaudal partipsiICOLmrc3
Periphery of the inferior colliculusipsiICOLpe3
Intercollicular nucleusipsiInCo4
Central sector of the central gray of the superior colliculusipsiccgSC2
Dorsal sector of the central gray of the superior colliculusipsidcgSC3
Superior colliculus intermediate layersipsiSCi1
Superior colliculus deep layersipsiSCd3
Deep gray layer of the superior colliculusipsiDpG4
Laterodorsal tegmental nucleusipsiLDTg2
Dorsal tegmental nucleusipsiDTg2
Dorsal tegmental nucleus lateral partipsiDLTN2
Pedunculopontine tegmental nucleusipsiPPTg0
Cuneiforme nucleusipsiCnF3
Dorsal raphe nucleusipsiDR1
Basal nucleus MeynertipsiB2
Substantia innominataipsiSI-0.5
Substantia innominata dorsal partipsiSID-0.5
Medial preoptic areaipsiMPA2
Lateral hypothalamic areaipsiLH2
Posterior hypothalamic nucleusipsiPH3
Ventromedial hypothalamic nucleus dorsomedial partipsiVMHDM3
Ventromedial hypothalamic nucleus ventrolateral partipsiVMHVL3
Suprageniculate thalamic nucleusipsiSG1
Lateral posterior thalamic nucleus dorsomedial sectoripsiLPdm1
Reticular thalamic nucleusipsiRt0
Subparafascicular thalamic nucleusipsiSPF1
Subparafascicular thalamic nucleus rostral partipsiSPFr1
Antero-polar part of zona incertaipsiZIAP2
Postero-polar part of zona incertaipsiZIPo2
Zona incerta ventral partipsiZIV2
Narrow band bordered dorsally by the internal capsule and ventrally by optic tractipsiicot-0.5
Lateral amygdaloid nucleusipsiLA0
Central amygdaloid nucleusipsiCe1
Caudal globus pallidusipsiGPc3
Caudoventral striatumipsiCPucv3
Temporal association area 2ipsiTe22
Temporal association area 3ipsiTe32
Temporal association cortex 1 layer 5ipsiTeAL51
Ventral temporal association cortexipsiTev2
Ventral temporal association cortex layer 5ipsiTevL53
Area 13 layer 5ipsiA13L53

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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