University of Rostock

Department of Anatomy

Neuroscience Group

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Rat connectome



Medial geniculate nucleus dorsal part right


Abbreviation
MGD
Color       
Superior regionsMedial geniculate nucleus

SynonymsAbbr.Language
Medial geniculate nucleus dorsal partMGDEng
 MGd 
Medial geniculate complex dorsal part  
Medial geniculate body dorsal part  
Dorsal division of the geniculate nucleus Eng
Dorsal division of the geniculate body Eng
Dorsal medial geniculate body  

SubregionsSide
Central dorsal tip of the medial geniculate nucleus dorsal partright
Dorsal superior subnucleus of the medial geniculate nucleus dorsal partright
Dorsolateral margin of the dorsal division of the medial geniculate nucleusright
Lateromedial part of medial geniculate nucleus dorsal partright
Medial geniculate nucleus caudal half of dorsal part dorsal divisonright
Medial geniculate nucleus dorsal part caudal partright
Medial geniculate nucleus dorsal part caudodorsal partright
Medial geniculate nucleus dorsal part dorsal aspectright
Medial geniculate nucleus dorsal part dorsal subdivisionright
Medial geniculate nucleus dorsal part limitans nucleusright
Medial geniculate nucleus dorsal part medial subdivisionright
Medial geniculate nucleus dorsal part rostral partright
Medial geniculate nucleus dorsal part ventral partright
Medial geniculate nucleus dorsal part ventrolateral partright
Mediodorsal tip of the medial geniculate nucleus dorsal partright
Mediolateral part of the dorsal division of the medial geniculate nucleusright
Rostrocaudal part of medial geniculate nucleus dorsal partright
Rostromedial part of the dorsal division of the medial geniculate nucleusright

Output to

NameSideAbbr.WeightDetails
Central grayipsiCG-1
Nuclei of the lateral lemniscusipsiNLL-1
Dorsal nucleus of the lateral lemniscusipsiDLL0.5
Inferior colliculusipsiICOL0.5
External cortex of the inferior colliculusipsiECIC1
Dorsal cortex of the inferior colliculusipsiDCIC-1
Nucleus of the brachium of the inferior colliculusipsiBIC0.5
Superior colliculusipsiSC0.5
Superior colliculus deep layersipsiSCd-1
Deep gray layer of the superior colliculusipsiDpG0.5
Reticular systemipsiRF0.5
Cuneiforme nucleusipsiCnF0.5
Ventromedial hypothalamic nucleusipsiVMH-1
Arcuate nucleusipsiArc-1
Medial hypothalamic groupipsiMHYPOg-1
Reticular thalamic nucleusipsiRt-1
Dorsal part of the caudal reticular thalamic nucleusipsiRtDc3
Dorsal part of the caudal reticular thalamic nucleusipsiRtDc3
Reticular thalamic nucleus dorsal partipsiRtD1
Subparafascicular thalamic nucleusipsiSPF-1
Zona incerta lateral partipsiZIL0
Basolateral nucleus rostral partipsiBLRP-0.5
Lateral amygdaloid nucleusipsiLA1.5
Dorsolateral part of the lateral nucleusipsiLaDL1.5
Lateral nucleus medial partipsiLAM1.5
Lateral nucleus ventral portionipsiLAVp-0.5
Ventrolateral part of the lateral nucleusipsiLaVL1.5
Central amygdaloid nucleus dorsal partipsiCed-1
Central amygdaloid nucleus lateral divisionipsiCeL-1
Globus pallidusipsiGP2
Caudate putamenipsiCPu2
Medial striatumipsiCPum-1
Dorsal striatumipsiCPud2
Posterior caudate putamenipsiCPup1
Ventral striatumipsiCPuv-1
Tail of the striatumipsiCPuTa-0.5
Subthalamic nucleusipsiSTh-1
Temporal cortexipsiTE2
Temporal association area 2ipsiTe22
Temporal association area 2 dorsal partipsiTe2D3
Temporal association area 3ipsiTe33
Temporal association area 3 rostral partipsiTe3R1
Temporal association area 3 ventral partipsiTe3V-0.5
Temporal association area 3 ventral part dorsal partipsiTe3VD1
Temporal association cortex 1ipsiTeA2
Dorsal fringe of caudal part of temporal association cortex 1ipsiTecaDF1
Temporal association cortex 1 caudodorsal partipsiTeAcd2
Temporal association cortex 1 posterodorsal part layer 1ipsiTeAPDL10.5
Temporal association cortex 1 posterodorsal part layer 2ipsiTeAPDL20.5
Temporal association cortex 1 posterodorsal part layer 3 lower halfipsiTeAPDL3Lh3
Temporal association cortex 1 posterodorsal part layer 3 upper halfipsiTeAPDL3Uh0.5
Temporal association cortex 1 posterodorsal part layer 4ipsiTeAPDL43
Temporal association cortex 1 posterodorsal part layer 5ipsiTeAPDL50.5
Temporal association cortex 1 posterodorsal part layer 6ipsiTeAPDL61.5
Temporal association cortex 1 posterodorsal part layer 6 deep partipsiTeAPDL6d0.5
Temporal association cortex 1 rostral partipsiTeAr2
Ventral part of temporal association cortex 1 rostral partipsiTeArV1
Temporal association cortex 1 ventral partipsiTeAv1
Temporal association cortex 1 ventral marginipsiTeAvm-0.5
Temporal association cortex 1 ventral part layer 1ipsiTeAvL10.5
Temporal association cortex 1 ventral part layer 2ipsiTeAvL20.5
Temporal association cortex 1 ventral part layer 3 lower halfipsiTeAvL3Lh3
Temporal association cortex 1 ventral part layer 3 upper halfipsiTeAvL3Uh0.5
Temporal association cortex 1 ventral part layer 4ipsiTeAvL43
Temporal association cortex 1 ventral part layer 5ipsiTeAvL50.5
Temporal association cortex 1 ventral part layer 6ipsiTeAvL61.5
Temporal association cortex 1 ventral part layer 6 deep partipsiTeAvL6d0.5
Ventral temporal association cortexipsiTev2
Temporoparietal cortex multisensoric zoneipsiMZTPcx1.5
Auditory regionsipsiAU1
PolyaudipsiPOLYAU2
Insular cortexipsiICX1
Perirhinal cortexipsiA352.5
Perirhinal cortex dorsal portionipsiPRhd-0.5
Ectorhinal cortexipsiA362
Ectorhinal cortex layer 4ipsiA36L42
Secondary visual cortex lateral areaipsiV2L-0.5
Secondary visual cortex lateral area layer 4ipsiV2LL4-0.5
Secondary visual cortex lateral area layer 3ipsiV2LL3-0.5
Commissural systemsipsicos-2

Input from

NameSideAbbr.WeightDetails
Central nucleus of the inferior colliculuscontraCIC1
External cortex of the inferior colliculuscontraECIC1
Dorsal cortex of the inferior colliculuscontraDCIC1
Spinal vestibular nucleuscontraSpVe2
Inferior colliculusipsiICOL3
External cortex of the inferior colliculusipsiECIC1
Superior vestibular nucleusipsiSuVe-0.5
RetinaipsiRET-10
Temporal cortexipsiTE2
Temporal association area 2ipsiTe22
Temporal association area 2 dorsal partipsiTe2D2
Temporal association area 2 dorsal part layer 3ipsiTe2DL31
Temporal association area 2 dorsal part layer 4ipsiTe2DL41
Temporal association area 2 dorsal part layer 5ipsiTe2DL5-0.5
Temporal association area 2 dorsal part layer 6ipsiTe2DL61
Temporal association area 2 ventral partipsiTe2V2
Temporal association area 3ipsiTe33
Temporal association area 3 rostral partipsiTe3R1
Temporal association area 3 ventral part dorsal partipsiTe3VD2
Temporal association cortex 1ipsiTeA2
Temporal association cortex 1 layer 3ipsiTeAL32
Temporal association cortex 1 layer 4ipsiTeAL42
Temporal association cortex 1 layer 5ipsiTeAL51
Temporal association cortex 1 layer 6ipsiTeAL62
Temporal association cortex 1 ventral partipsiTeAv2
Ventral temporal association cortexipsiTev2
Auditory regionsipsiAU1
Primary auditory cortexipsiAu11
Perirhinal cortex anterior portionipsiPRha3
Perirhinal cortex anterior portion layer 5ipsiPRhaL52.5
Perirhinal cortex anterior portion layer 6ipsiPRhaL62.5
Motoric regionsipsiM-0.5
Primary somatosensory cortexipsiS1-0.5
Secondary somatosensory cortexipsiS2-3
Secondary somatosensory cortex caudal partipsiS2C2
Spinal cord layers C1ipsiSCLC10
Spinal cord layers C2ipsiSCLC20
Spinal cord layers C3ipsiSCLC30
Spinal cord layers C4ipsiSCLC40
Spinal cord layers C5ipsiSCLC50
Spinal cord layers C6ipsiSCLC60
Spinal cord layers C7ipsiSCLC70
Spinal cord layers C8ipsiSCLC80

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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