University of Rostock

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Rat connectome



Triangular septal nucleus right


Abbreviation
TS
Color       
Superior regionsPosterior septal complex

SynonymsAbbr.Language
Triangular nucleus of the septum  
Triangular nucleus septumTRSEng
Nucleus triangularis septalis  
Triangular septal nucleusTSEng
Triangular nucleus of septum  

SubregionsSide
Triangular septal nucleus middle partright
Ventral triangular septal nucleusright
Dorsal triangular septal nucleusright

Output to

NameSideAbbr.WeightDetails
Posterodorsal tegmental nucleuscontraPDTg1
Laterodorsal tegmental nucleuscontraLDTg2
Dorsal tegmental nucleuscontraDTg0.5
Nucleus incertuscontraNI-0.5
Nucleus incertus pars dissipatacontraNId3
Median raphe nucleuscontraMnR0
Pontine raphe nucleuscontraPnR3
Arcuate nucleuscontraArc-0.5
Paraventricular hypothalamic nucleuscontraPa0
HabenulacontraHAB-0.5
Habenular commissurecontrahbc-2
Lateral habenular nucleuscontraLHb0
Lateral habenular nucleus medial partcontraLHbM3
Medial habenular nucleuscontraMHb0.5
Medial habenular nucleus dorsolateral partcontraMHbDL0
Medial habenular nucleus dorsomedial partcontraMHbdm1
Medial habenular nucleus ventrolateral partcontraMHbVL1
Medial habenular nucleus ventromedial partcontraMHbvm1
Central grayipsiCG1
Fasciculus retroflexusipsifr-2
Posterodorsal tegmental nucleusipsiPDTg1
Ventral tegmental area A10ipsiVTA1
Adjacent parts of the ventral tegmental areaipsiVeMTap-0.5
Laterodorsal tegmental nucleusipsiLDTg2
Dorsal tegmental nucleusipsiDTg0.5
Barringtons nucleusipsiBar2
Nucleus incertusipsiNI1
Nucleus incertus pars dissipataipsiNId3
Median raphe nucleusipsiMnR1
Paramedian raphe nucleusipsiPMnR-0.5
Pontine raphe nucleusipsiPnR3
Median eminenceipsiME-0.5
Angular part of the ventral diagonal bandipsiVDBVA3
Nucleus of the horizontal limb of the diagonal bandipsiHDB1
Nucleus of the horizontal limb of the diagonal band medial edgeipsiHDBmE1
Nucleus of the vertical limb of the diagonal bandipsiVDB1
Medial septal nucleusipsiMS1
Cell bridge between tuberomammillary nucleus and caudal magnocellular nucleusipsiCbTuMcm-0.5
Lateral preoptic areaipsiLPO1
Lateral preoptic area dorsomedial to the supraoptic nucleus anterior partipsiLPOdmSOA1
Medial preoptic areaipsiMPA0
Nucleus medianus of the medial preoptic areaipsiMPAme3
Anterior border of the nucleus medianus of the medial preoptic areaipsiMPAmeAB-2
Ventral tuberomammillary nucleusipsiVTM0
Vascular organ of the lamina terminalisipsiVOLT2
Juxtaparaventricular part caudal [Lateral hypothalamic area [Preoptic anterior region]]ipsiJPVC0
Juxtaparaventricular part rostral [Lateral hypothalamic area [Preoptic anterior region]]ipsiJPVR1
Area periventricularis hypothalamica dorsalisipsiAPD1
Lateral hypothalamic area juxtadorsomedial regionipsiJDM0.5
Lateral hypothalamic area over supraoptic nucleusipsiLHoso1
Lateral hypothalamic area dorsal to the supraoptica nucleus anterior divsionipsiLHdSOA1
Tuberal magnocellular nucleusipsiTUmag0
Nucleus circularisipsiNC2
Caudal magnocellular nucleus main portionipsiCMCmp0
Posterior hypothalamic nucleusipsiPH-0.5
Periventricular zoneipsiPVZ-0.5
Anterior periventricular nucleusipsiPeA1
Anterior periventricular nucleus beneath anterior commissureipsiPeAbac-0.5
Paraventricular hypothalamic nucleusipsiPa2
Paraventricular hypothalamic nucleus rostral accessory clusteripsiParac2
Supraoptic nucleus anterior divisionipsiSOA3
Ventral border of the Supraoptic nucleus anterior divisionipsiSOAvb3
Supraoptic nucleus tuberal partipsiSOT2
Premammillary nucleus dorsal partipsiPMD-2
Premammillary nucleus ventral partipsiPMV-2
Supramammillar nucleusipsiSuM-0.5
Supramammillar nucleus lateral partipsiSuML-2
Perifornical nucleusipsiPeF-2
Perifornical nucleus dorsal partipsiPeFD2
Cell bridge between the central medial thalamic nucleus and the ventral tuberomammillary nucleusipsiCMmrLcV-1
Mediodorsal thalamic nucleusipsiMD3
Mediodorsal thalamic nucleus lateral partipsiMDL-0.5
Midline group of the dorsal thalamusipsiMTN1
Rostral subfornical organipsiSFOR-2
Anterior stalk of the subfornical organipsiSFOas-2
HabenulaipsiHAB3
Habenular commissureipsihbc4
Lateral habenular nucleusipsiLHb1
Lateral habenular nucleus medial partipsiLHbM3
Medial habenular nucleusipsiMHb4
Medial habenular nucleus caudal partipsiMHbc-0.5
Medial habenular nucleus dorsolateral partipsiMHbDL0
Medial habenular nucleus dorsomedial partipsiMHbdm2
Medial habenular nucleus ventrolateral partipsiMHbVL2
Medial habenular nucleus ventromedial partipsiMHbvm2
Anterior lobe of pituitaryipsiAPit0
Posterior lobe of pituitaryipsiPPit0
Stria medullaris of the thalamusipsism1
Dorsal stria medullaris of the thalamusipsidsm-2
Ventral stria medullaris of the thalamusipsivsm-2
HippocampusipsiHIPP-2
Columns of the fornixipsicoLf-2
Columns of the fornix above the anterior commissureipsicoLfac-2
Medial prefrontal cortexipsimPFC1
Interpeduncular nucleusipsiIP3
Interpeduncular nucleus caudal subnucleusipsiIPC1
Interpeduncular nucleus medial part middle partipsiIPMM1

Input from

NameSideAbbr.WeightDetails
Laterodorsal tegmental nucleuscontraLDTg3
Locus coeruleuscontraLC4
Nucleus incertus pars dissipatacontraNId1
Medial group of the dorsal thalamuscontraMED0.5
Mediodorsal thalamic nucleuscontraMD0.5
Paraventricular thalamic nucleuscontraPV0
Medial habenular nucleuscontraMHb0.5
SubiculumcontraS0
Laterodorsal tegmental nucleusipsiLDTg3
Locus coeruleusipsiLC4
Nucleus incertus pars compactaipsiNIc3
Nucleus incertus pars dissipataipsiNId3
Nucleus of the solitary tract caudal partipsiSolca0.5
Nucleus of the solitary tract rostral partipsiSolro0
Dorsal raphe nucleus caudal partipsiDRC2
Median raphe nucleusipsiMnR-0.5
Caudal ventrolateral medullaipsiCVLM0.5
Rostral ventrolateral medullaipsiRVLM3
Nucleus of the horizontal limb of the diagonal bandipsiHDB3
Nucleus of the vertical limb of the diagonal bandipsiVDB3
Medial septal nucleusipsiMS3
Medial septal nucleus medial partipsiMSm-2
Medial preoptic areaipsiMPA1
Median preoptic nucleusipsiMnPO1
Vascular organ of the lamina terminalisipsiVOLT-0.5
Dorsal aspect of the vascular organ of the lamina terminalisipsiVOLTda-0.5
Juxtaparaventricular part caudal [Lateral hypothalamic area [Preoptic anterior region]]ipsiJPVC0.5
Juxtaparaventricular part rostral [Lateral hypothalamic area [Preoptic anterior region]]ipsiJPVR0
Lateral hypothalamic areaipsiLH1
Lateral hypothalamic area juxtadorsomedial regionipsiJDM0.5
Lateral hypothalamic area perifornical partipsiPFx1
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM1
Dorsomedial hypothalamic nucleus dorsomedial partipsiDMDM1
Posterior hypothalamic nucleus caudal partipsiPHCa1
Posterior hypothalamic nucleus rostral partipsiPHRo1
Suprachiasmatic nucleusipsiSCh-0.5
Supramammillar nucleus lateral part lateral subpartipsiSuMLL1
Supramammillar nucleus lateral part medial subpartipsiSuMLM2
Supramammillar nucleus medial partipsiSuMM1
Medial group of the dorsal thalamusipsiMED2
Mediodorsal thalamic nucleusipsiMD2
Paraventricular thalamic nucleusipsiPV0
Medial habenular nucleusipsiMHb3
Medial habenular nucleus rostrocaudal partipsiMHbrc3
Field CA1 of hippocampusipsiCA11
Field CA2 of hippocampusipsiCA21
Field CA2 of hippocampus layer stratum secondary axon of commissural fibers of pyramidale pyramidal cellsipsiCA2L3scfpy-0.5
Field CA3 of hippocampusipsiCA31
Field CA3a of hippocampus pyramidal cell layer secondary axon from commissural fibers of pyramidal cellsipsiCA3aLcfpyc-0.5
Proximal part of field CA3b of hippocampusipsiCA3bp-0.5
Molecular layer of the subiculumipsiSumo-0.5
Presubiculum layer 2ipsiPrSL22
Presubiculum layer 3ipsiPrSL32
Presubiculum layer 5ipsiPrSL52
Parasubiculum superficial layer 2ipsiPaSsL22
Parasubiculum superficial layer 3ipsiPaSsL32
Septofimbrial nucleusipsiSFi-0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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