University of Rostock

Department of Anatomy

Neuroscience Group

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Rat connectome



Cingulate cortex layer 5 right


Abbreviation
CgL5
Color       
Superior regionsCingulate cortex deep layers

SynonymsAbbr.Language
Cingulate cortex layer 5CgL5 
Lamina VI of cingulate cortex  

SubregionsSide
Cingulate cortex layer 5 aright
Cingulate cortex layer 5 bright

Output to

NameSideAbbr.WeightDetails
Ventral tegmental area A10 middle thirdcontraVTAmit-0.5
Pontine nucleicontraPn1
Posterior hypothalamic nucleuscontraPH2
ClaustrumcontraCl3
Caudate putamencontraCPu0.5
Dorsomedial striatumcontraCPudm-0.5
Medial striatumcontraCPum3
Lateral striatumcontraCPul3
Posterior cingulate cortexcontraPCC-0.5
Tegmental areaipsiTGA2
Ventral tegmental area A10 middle thirdipsiVTAmit-0.5
Reticulotegmental nucleusipsiRETn1.5
Pontine nucleiipsiPn1
Lateral reticular nucleusipsiLRt2
Principal sensory trigeminal nucleusipsiPr53
Spinal trigeminal nucleus caudal partipsiSp5C3
Posterior hypothalamic nucleusipsiPH3
Anterior group of the dorsal thalamusipsiATN3
Mediodorsal thalamic nucleusipsiMD3
Reticular thalamic nucleus rostral partipsiRtr2
ClaustrumipsiCl1.5
Caudate putamenipsiCPu3
Dorsomedial striatumipsiCPudm-0.5
Medial striatumipsiCPum3
Lateral striatumipsiCPul3
Temporal association area 2 caudal partipsiTe2C1
Visual regionsipsiVR1.5
Pyramidal tractipsipy0
Cervical segment 5ipsiCS5-0.5
Cervical segment 6ipsiCS6-0.5

Input from

NameSideAbbr.WeightDetails
Diagonal band of BrocaipsiDBB3
Suprachiasmatic nucleusipsiSCh-0.5
Anterior group of the dorsal thalamusipsiATN2
Anteroventral thalamic nucleusipsiAV-0.5
Midline group of the dorsal thalamusipsiMTN2
Paraventricular thalamic nucleus anterior partipsiPVA2
Intralaminar nucleiipsiILN2
Lateral thalamic nuclear groupipsiLTNG-0.5
Posterior basolateral nucleusipsiBLP-0.5
SubiculumipsiS-0.5
Lateromedial part of the lateral extrastriate cortexipsiVISLLM0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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