University of Rostock

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Rat connectome



Central medial thalamic nucleus lateral part left


Abbreviation
CMl
Color       
Superior regionsCentral medial thalamic nucleus

SynonymsAbbr.Language
Central medial thalamic nucleus lateral partCMl 
Lateral part of central medial thalamic nucleus  

Output to

NameSideAbbr.WeightDetails
Caudate putamenipsiCPu3
Associative striatumipsiACPu3
Dorsolateral striatumipsiCPudl3
Dorsal striatum rostrodorsal partipsiCPudrd3
Subthalamic nucleus lateral partipsiSThl3
Subthalamic nucleus medial partipsiSThM3
Subthalamic nucleus medial one-thirdipsiSThMot2
Lateral agranular prefrontal cortexipsiAGl0.5
Medial agranular prefrontal cortex anterior partipsiAGmA2
Medial agranular prefrontal cortex caudal partipsicAGm0.5
Lateral orbital cortexipsiLO2

Input from

NameSideAbbr.WeightDetails
Central gray lateral partipsiCGL2
Interstitial nucleus of medial longitudinal fasciculusipsiIMLF1
Nucleus of DarkschewitschipsiDk2
Periaqueductal grayipsiPAG2
Tegmental areaipsiTGA2
Subpeduncular tegmental nucleusipsiSPTg1
Substantia nigra reticular part dorsolateral tieripsiSNRDL1.5
Dorsal tegmental nucleusipsiDTg2
Dorsal tegmental nucleus lateral partipsiDLTN2
Locus coeruleus rostral partipsiLCRo2
Reticular systemipsiRF2
Deep mesencephalic nucleusipsiDpMe1
Parabrachial nucleus dorsal partipsiPBD2
Parabrachial nucleus ventral partipsiPBV2
Raphe nucleiipsiRAN2
Dorsal raphe nucleusipsiDR1
Zona incertaipsiZI2
Central gray lateral partcontraCGL1
Substantia nigra reticular part dorsolateral tiercontraSNRDL0.5
Dorsal tegmental nucleuscontraDTg1
Dorsal tegmental nucleus lateral partcontraDLTN1
Locus coeruleus rostral partcontraLCRo1
Reticular systemcontraRF1
Deep mesencephalic nucleuscontraDpMe0.5
Parabrachial nucleus dorsal partcontraPBD1
Parabrachial nucleus ventral partcontraPBV1
Raphe nucleicontraRAN1

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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