University of Rostock

Department of Anatomy

Neuroscience Group

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Rat connectome



Subpeduncular tegmental nucleus left


Abbreviation
SPTg
Color       
Superior regionsTegmental area

SynonymsAbbr.Language
Subpeduncular tegmental nucleusSPTgEng
Subpeduncular tegmental nucleusSptgEng
Subpeduncular tegmental nucleusSPTgEng

Output to

NameSideAbbr.WeightDetails
Medial longitudinal fasciculusipsimlf-0.5
Nucleus of DarkschewitschipsiDk0
Oculomotor nucleusipsi32
Ventral tegmental area A10ipsiVTA-0.5
Ventral tegmental area A10 middle thirdipsiVTAmit-0.5
Edinger Westphal nucleusipsiEW3
Cerebellar lobule 4ipsiCERL4-0.5
Cerebellar lobule 5ipsiCERL5-0.5
Prepositus nucleusipsiPr1
Pontine reticular nucleusipsiPRN1
Medullary reticular nucleus dorsal partipsiMdDd0.5
Facial nucleus lateral subnucleusipsi7L1.5
Anteroventral thalamic nucleusipsiAV0
Central medial thalamic nucleusipsiCM1
Central medial thalamic nucleus lateral partipsiCMl1
Centrolateral thalamic nucleusipsiCL3
Paracentral thalamic nucleusipsiPC1
Paracentral thalamic nucleus caudal partipsiPC-c2
Paracentral thalamic nucleus rostral partipsiPC-r0
Parafascicular thalamic nucleusipsiPF2
Parafascicular thalamic nucleus lateral partipsiPFL2
Parafascicular thalamic nucleus medial partipsiPFM3
Rhomboid thalamic nucleusipsiRh0
Mediodorsal thalamic nucleusipsiMD0
Intermediodorsal thalamic nucleusipsiIMD0
Mediodorsal thalamic nucleus lateral partipsiMDL1
Submedius thalamic nucleusipsiSub0
Paratenial thalamic nucleusipsiPT1
Paraventricular thalamic nucleus anterior partipsiPVA0
Paraventricular thalamic nucleus medial partipsiPVM0
Paraventricular thalamic nucleus posterior partipsiPVP0
Reuniens thalamic nucleusipsiRe2
Ventral posterior thalamic nucleus parvicellular partipsiVPPC0
Ventromedial thalamic nucleus caudal partipsiVMc3
Oval paracentral thalamic nucleusipsiOPC1
Lateral agranular prefrontal cortexipsiAGl1
Spinal cord layers L1ipsiSCLL1-0.5
Spinal cord layers L2ipsiSCLL2-0.5
Medial longitudinal fasciculuscontramlf-0.5
Ventral tegmental area A10 middle thirdcontraVTAmit-0.5
Prepositus nucleuscontraPr0.5
Pontine reticular nucleuscontraPRN1
Medullary reticular nucleus dorsal partcontraMdDd0.5
Facial nucleus lateral subnucleuscontra7L1.5
Spinal cord layers L1contraSCLL1-0.5
Spinal cord layers L2contraSCLL2-0.5
Stellate ganglionipsiAutoSteG1
Musculus abductor caudae dorsalisipsiMuscAbdCaDo-10

Input from

NameSideAbbr.WeightDetails
Substantia nigra lateral partipsiSNL3
Substantia nigra reticular partipsiSNR3
Prepositus nucleusipsiPr1
Pontine reticular nucleusipsiPRN2
Subcoeruleus nucleus dorsal partipsiSubCD1
Dorsomedial hypothalamic nucleusipsiDMHy0.5
Perifornical hypothalamic area [Preoptic anterior region]ipsiPFxPAR0.5
Lateral hypothalamic areaipsiLH-0.5
Lateral hypothalamic area dorsal partipsiLHd0
Lateral hypothalamic area ventral partipsiLHAvp2
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM0.5
Periventricular zoneipsiPVZ1
Medial part of the caudal perifornical areaipsiPeFCM1
Lateral part of the caudal perifornical areaipsiPeFCL0.5
Whisker motor cortex A1ipsiWMCxA11.5
Prepositus nucleuscontraPr0.5
Pontine reticular nucleuscontraPRN1
Dorsomedial hypothalamic nucleuscontraDMHy-0.5
Perifornical hypothalamic area [Preoptic anterior region]contraPFxPAR-0.5
Lateral hypothalamic area dorsal partcontraLHd0
Lateral hypothalamic area ventral partcontraLHAvp-0.5
Dorsomedial hypothalamic nucleus [Medial zone]contraDM-0.5
Periventricular zonecontraPVZ-0.5
Medial part of the caudal perifornical areacontraPeFCM-0.5
Lateral part of the caudal perifornical areacontraPeFCL-0.5
Whisker motor cortex A1contraWMCxA11.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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