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Rat connectome



Bed nucleus of the stria terminalis medial division left


Abbreviation
BSTM
Color       
Superior regionsBed nucleus of the stria terminalis

SynonymsAbbr.Language
Medial division of bed nucleus of the stria terminalis Eng
Medial district of bed nucleus of the stria terminalis Eng
Bed nucleus of the stria terminalis medial divisionSTMEng
Bed nucleus of the stria terminalis medial divisionBSTMEng

SubregionsSide
Bed nucleus of the stria terminalis medial division anterior partleft
Bed nucleus of the stria terminalis medial division posterior partleft
Bed nucleus of the stria terminalis medial division posterointermediate partleft
Bed nucleus of the stria terminalis medial division posterolateral partleft
Bed nucleus of the stria terminalis medial division posteromedial partleft
Bed nucleus of the stria terminalis medial division rostral partleft
Bed nucleus of the stria terminalis medial division ventral partleft
Cell poor zone that encapsulates BSTMleft
Medial subcommissural bed nucleus of the stria terminalisleft
Bed nucleus of the stria terminalis medial division anterior lateral partleft
Bed nucleus of the stria terminalis medial division dorsomedial partleft
Bed nucleus of the stria terminalis medial division fusiform partleft
Bed nucleus of the stria terminalis medial division dorsal partleft
Bed nucleus of the stria terminalis medial division lateral ventral partleft
Bed nucleus of the stria terminalis medial division ventromedial partleft

Output to

NameSideAbbr.WeightDetails
Central gray lateral ventral partipsiCGVD1
Lateral periaqueductal grayipsiLPAG3
Ventral midbrain tegmentumipsiVeMT0
Ventral tegmental area A10ipsiVTA3
Laterodorsal tegmental nucleusipsiLDTg-2
Barringtons nucleusipsiBar4
Locus coeruleusipsiLC1
Pericoerulear regionipsiPCR3
Pontine nucleiipsiPn-0.5
Parabrachial nucleusipsiPB2
Parabrachial nucleus anterior halfipsiPBah0
Gigantocellular reticular nucleus alpha partipsiGiA0.5
Parvicellular reticular nucleusipsiPCRt2
Subcoeruleus nucleus ventral partipsiSubCV1
Mesencephalic trigeminal nucleusipsiMe53
Mesencephalic trigeminal nucleus medial partipsiperiMe52
Dorsal motor nucleus of vagus posterior partipsi10Po3
Median raphe nucleusipsiMnR1
Midline apneic siteipsiMAS3
Raphe magnus nucleus caudal partipsiRMgc1
Raphe magnus nucleus rostral partipsiRMgR1
Raphe pallidus nucleusipsiRPa1
Nucleus of the horizontal limb of the diagonal bandipsiHDB-0.5
Substantia innominataipsiSI-1
Substantia innominata dorsal partipsiSID3
Substantia innominata ventral partipsiSIV1
Medial preoptic areaipsiMPA-0.5
Medial preoptic nucleusipsiMPO-0.5
Median preoptic nucleusipsiMnPO0
Lateral hypothalamic area ventromedial partipsiLHvm-1
Rostro-dorso kateral hypothalamic areaipsiRDLH0.5
Lateral hypothalamic area at the level of the caudal half to the ventromedial hypothalamic nucleusipsiLHAaCVMH1
Mediobasal hypothalamusipsiMeHypo0
Medial division of the hypothalamusipsiMdH4
Anterior hypothalamic area central partipsiAHAC-1
Anterior hypothalamic nucleusipsiAHn-1
Dorsal hypothalamic areaipsiDA1
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM3
Ventromedial hypothalamic nucleusipsiVMH3
Mediobasal hypothalamus anterior partipsiMeHypoAnt4
Mediobasal hypothalamus posterior partipsiMeHypoP4
Arcuate nucleusipsiArc-1
Paraventricular hypothalamic nucleusipsiPa3
Preoptic periventricular nucleusipsiPePO-0.5
Anterior hypothalamic area [Regio rostralis]ipsiAHARR-1
Perifornical nucleusipsiPeF1
Paratenial thalamic nucleusipsiPT-0.5
Paraventricular thalamic nucleusipsiPV-0.5
Medial habenular nucleusipsiMHb-0.5
Stria medullaris of the thalamusipsism-2
Amygdaloid complexipsiAC-0.5
Basolateral amygdaloid nucleusipsiBL-0.5
Posterior basolateral nucleusipsiBLP1
Posterior basomedial nucleusipsiBMP-0.5
Bed nucleus of the stria terminalisipsiBST-1
Bed nucleus of the stria terminalis lateral division dorsal partipsiBSTLD0.5
Bed nucleus of the stria terminalis medial divisionipsiBSTM2
Bed nucleus of the stria terminalis medial division posterior partipsiBSTMP2.5
Central amygdaloid nucleusipsiCe-0.5
Interstitial nucleus of the posterior limb of the anterior commissure medial partipsiIPACM2.5
Central division of sublenticular extended amygdalaipsiSLEAc-1
Medial division of the sublenticular extended amygdalaipsiSLEAm-1
Amygdalopiriform transition areaipsiAPir1
Medial extended amygdalaipsiMEXA2
Medial amygdaloid nucleusipsiMe-1
Medial amygdaloid nucleus anterodorsal partipsiMeAD-1
Medial amygdaloid nucleus posterodorsal partipsiMePD2.5
Amygdalohippocampal areaipsiAHi1
Bed nucleus of the anterior commissureipsiBAC-1
Lateral entorhinal cortex ventral partipsiVLEA1
Lateral entorhinal cortex ventromedial partipsiVMEAL1
Accessory olfactory bulbipsiAOB-0.5
Lateral septal nucleusipsiLS-1
Lateral septal nucleus ventral partipsiLSV-0.5
Stria terminalisipsist-2
Ventral tegmental area A10contraVTA1
Median raphe nucleuscontraMnR0
Midline apneic sitecontraMAS3
Paraventricular hypothalamic nucleuscontraPa1.5

Input from

NameSideAbbr.WeightDetails
Dorsolateral periaqueductal grayipsiDLPAG-0.5
Ventrolateral periaqueductal grayipsiVLPAG-0.5
Substantia nigra compact part medial tieripsiSNCM-0.5
Substantia nigra lateral partipsiSNL0.5
Substantia nigra medial partipsiSNM3
Ventral tegmental area A10ipsiVTA3
Peripeduncular areaipsiPPA1
Retrorubral nucleusipsiRR3
Dorsal tegmental nucleusipsiDTg-0.5
Locus coeruleusipsiLC2
Ventrolateral reticular formationipsiVLRF1
Mesencephalic reticular formationipsiMRF-0.5
Lateral parabrachial nucleusipsiLPB2
Parabrachial nucleus medialipsiPBnMe2
Parabrachial nucleus anterior halfipsiPBah0
Nucleus of the solitary tractipsiSol-0.5
Nucleus of the solitary tract commissural partipsiSolC3
Dorsal raphe nucleusipsiDR2
Dorsal raphe nucleus caudal part non serotoninergic populationipsiDRCnsp3
Dorsal raphe nucleus dorsal part non serotoninergic populationipsiDRDnsp3
Dorsal raphe nucleus interfascicular part non serotoninergic populationipsiDRInsp3
Dorsal raphe nucleus lateral wing non serotoninergic populationipsiDRIwnsp3
Dorsal raphe nucleus midrostrocaudal part non serotoninergic populationipsiDRmrcnsp3
Dorsal raphe nucleus rostral part non serotoninergic populationipsiDRrnsp3
Dorsal raphe nucleus ventral part non serotoninergic populationipsiDRVnsp3
Dorsal raphe nucleus ventrolateral part non serotoninergic populationipsiDRVLnsp3
Median raphe nucleusipsiMnR-0.5
Medial raphe nucleusipsiMeR2
Raphe magnus nucleus rostral partipsiRMgR3
A1 noradrenergic cellsipsiA1-0.5
Diagonal band of BrocaipsiDBB1
Nucleus of the horizontal limb of the diagonal bandipsiHDB-0.5
Substantia innominataipsiSI0
Substantia innominata ventral partipsiSIV3
Subpallidal substantia innominataipsiSIsp3
Medial preoptic areaipsiMPA3
Caudal pole of medial preoptic areaipsiMPAc2
Dorsomedial hypothalamic nucleusipsiDMHy2
Lateral zoneipsiLHA2
Lateral hypothalamic areaipsiLH3
Lateral hypothalamic area perifornical partipsiPFx3
Lateroanterior hypothalamic nucleusipsiLAH3
Tuberal nucleusipsiTU2.5
Anterior hypothalamic areaipsiAHA-0.5
Anterior hypothalamic nucleusipsiAHn3
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM3
Dorsomedial hypothalamic nucleus dorsomedial partipsiDMDM3
Subparaventricular zone ventral partipsiSuPZv2
Ventromedial hypothalamic nucleusipsiVMH2
Ventromedial hypothalamic nucleus dorsomedial partipsiVMHDM3
Ventromedial hypothalamic nucleus ventromedial partipsiVMHvm3
Arcuate nucleusipsiArc2
Nucleus paraventricularis [Periventricular zone anterior region]ipsiPaPAR-0.5
Paraventricular hypothalamic nucleus magnocellular divisionipsiPaMag3
Paraventricular hypothalamic nucleus parvocellular divisionipsiPavPo3
Periventricular hypothalamic nucleusipsiPe3
Suprachiasmatic nucleusipsiSCh2
Medial hypothalamic groupipsiMHYPOg2
Incerto hypothalamic areaipsiicHYPO-0.5
Premammillary nucleus ventral partipsiPMV2
Supramammillar nucleusipsiSuM-0.5
Perifornical nucleusipsiPeF3
Retrochiasmatic areaipsiRCh3
Central medial thalamic nucleusipsiCM2
Paracentral thalamic nucleusipsiPC1
Parafascicular thalamic nucleusipsiPF2
Rhomboid thalamic nucleusipsiRh-0.5
Intermediodorsal thalamic nucleusipsiIMD1
Paratenial thalamic nucleusipsiPT1
Paraventricular thalamic nucleusipsiPV3
Paraventricular thalamic nucleus anterior partipsiPVA-0.5
Paraventricular thalamic nucleus posterior partipsiPVP1
Reuniens thalamic nucleusipsiRe2
Subparafascicular thalamic nucleusipsiSPF2
Zona incertaipsiZI2
Tuber cinereum areaipsiTC2
Medial habenular nucleusipsiMHb-0.5
Internal capsuleipsiic-2
Basolateral amygdaloid nucleusipsiBL3
Anterior basolateral nucleusipsiBLA0
Posterior basolateral nucleusipsiBLP0
Basomedial amygdaloid nucleusipsiBM3
Lateral amygdaloid nucleusipsiLA3
Anterior tip of the lateral nucleusipsiLAat1
Bed nucleus of the stria terminalis caudal partipsiBSTCa2
Bed nucleus of the stria terminalis intraamygdaloid divisionipsiBSTIA3
Bed nucleus of the stria terminalis medial divisionipsiBSTM2
Bed nucleus of the stria terminalis medial division posterointermediate partipsiBSTMPI-1
Bed nucleus of the stria terminalis medial division posterolateral partipsiBSTMPL-1
Central amygdaloid nucleusipsiCe2
Central amygdaloid nucleus lateral divisionipsiCeL1
Central amygdaloid nucleus medial divisionipsiCeM1
Amygdalopiriform transition areaipsiAPir-1
Anterior amygdaloid areaipsiAA2
Cortical amygdaloid nucleusipsiCAn3
Posterior amygdaloid nucleusipsiCOAp3
Nucleus of the lateral olfactory tract layer 2ipsiLOTL21
Medial amygdaloid nucleusipsiMe3
Medial amygdaloid nucleus anterodorsal partipsiMeAD3
Medial amygdaloid nucleus posterodorsal partipsiMePD-1
Medial amygdaloid nucleus posteroventral partipsiMePV3
Amygdalohippocampal areaipsiAHi3
Globus pallidusipsiGP0
Ventral pallidumipsiVP3
Accumbens nucleusipsiAc1
Caudate putamenipsiCPu1
Fundus of the striatumipsiFS3
Hippocampal regionsipsiHIPPR-0.5
Field CA3 of hippocampusipsiCA3-0.5
Subiculum ventral partipsiSv3
Subiculum lateral ventral partipsiSvl-0.5
Subiculum ventral part medial partipsiSvm-0.5
Rostral ventrolateral entorhinal areaipsirVLEA2
Piriform cortexipsiPir3
Posterior prepiriform cortexipsiPPPC-0.5
Anterior cingulate cortexipsiACC0
Cingulate cortex area 1 caudal partipsiCg1c0
Cingulate cortex area 2 caudal partipsiCg2c0
Prelimbic cortexipsiPrL2
Prelimbic cortex anterior partipsiPrLa2.5
Prelimbic cortex dorsal partipsiPrLd0
Prelimbic cortex ventral partipsiPrLv0.5
Prelimbic cortex posterior partipsiPrLP2.5
Infralimbic cortexipsiIL3
Posterior infralimbic cortexipsiILP4
Infralimbic cortex anterior partipsiILAn0.5
Frontal cortex area 2ipsiFr20
Insular cortexipsiICX3
Agranular insular cortexipsiAI2.5
Agranular insular cortex anterior partipsiAIA2.5
Agranular insular cortex rostral posterior partipsirAIp1
Agranular insular cortex posterior partipsiAIP2
Agranular insular cortex middle partipsiAImi2.5
Dysgranular insular cortexipsiDI0.5
Granular insular cortexipsiGI0
Perirhinal cortexipsiA353
Dorsal peduncular cortexipsiDP1.5
Medial prefrontal cortexipsimPFC1.5
Medial agranular prefrontal cortexipsiAGm0
Orbital cortexipsiOrC0.5
Olfactory tubercleipsiTuO1
Lateral septal nucleusipsiLS3
Lateral septal nucleus dorsal partipsiLSD-2
Lateral septal nucleus intermediate partipsiLSI-2
Lateral septal nucleus ventral partipsiLSV-2
Anteroposterior extension of the lateral septal nucleusipsiLSap-2
Ventroposterior extension of the lateral septal nucleusipsiLSvp-2
Locus coeruleuscontraLC2
Lateral parabrachial nucleuscontraLPB2
Parabrachial nucleus medialcontraPBnMe2
Nucleus of the solitary tract commissural partcontraSolC-0.5
Dorsal raphe nucleuscontraDR-0.5
Medial raphe nucleuscontraMeR-0.5
Raphe magnus nucleus rostral partcontraRMgR3
Medial preoptic areacontraMPA-0.5
Dorsomedial hypothalamic nucleuscontraDMHy-0.5
Lateral zonecontraLHA-0.5
Anterior hypothalamic nucleuscontraAHn3
Ventromedial hypothalamic nucleuscontraVMH-0.5
Arcuate nucleuscontraArc2
Paraventricular hypothalamic nucleus magnocellular divisioncontraPaMag-0.5
Paraventricular hypothalamic nucleus parvocellular divisioncontraPavPo-0.5
Periventricular hypothalamic nucleuscontraPe3
Perifornical nucleuscontraPeF3
Paraventricular thalamic nucleuscontraPV-0.5
Reuniens thalamic nucleuscontraRe-0.5
Tuber cinereum areacontraTC2
Basolateral amygdaloid nucleuscontraBL3
Basomedial amygdaloid nucleuscontraBM3
Lateral amygdaloid nucleuscontraLA3
Bed nucleus of the stria terminalis anterior division dorsolateral nucleuscontraBSTAdl1
Bed nucleus of the stria terminalis anterior dorsal areacontraBSTAD1
Bed nucleus of the stria terminalis caudal partcontraBSTCa-0.5
Central amygdaloid nucleuscontraCe2
Anterior amygdaloid areacontraAA2
Cortical amygdaloid nucleuscontraCAn3
Medial amygdaloid nucleuscontraMe-0.5
Piriform cortexcontraPir3
Insular cortexcontraICX3
Perirhinal cortexcontraA353

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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