University of Rostock

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Rat connectome



Bed nucleus of the stria terminalis intraamygdaloid division left


Abbreviation
BSTIA
Color       
Superior regionsBed nucleus of the stria terminalis

SynonymsAbbr.Language
Bed nucleus of the stria terminalis intraamygdaloid divisionBSTIAEng
Intraamygdaloid division of the bed nucleus of the stria terminalis  
Intraamygdaloid bed nucleus of the stria terminalis  
Intraamygdaloid stria terminalisSTIAEng
Bed nucleus of the stria terminalis intraamygdaloid partBSTIAEng
Bed nucleus of stria terminalis intraamygdaloid divisionSTIAEng

SubregionsSide
Bed nucleus of the stria terminalis intraamygdaloid division lateral partleft
Bed nucleus of the stria terminalis intraamygdaloid division medial partleft
Bed nucleus of the stria terminalis intraamygdaloid division anterior partleft

Output to

NameSideAbbr.WeightDetails
Ventral tegmental area A10 caudal partipsiVTAcp0.5
Ventral tegmental area rostral partipsiVTAR0.5
Peripeduncular nucleusipsiPP-0.5
Parabrachial nucleus dorsal partipsiPBD0.5
Parabrachial nucleus ventral partipsiPBV0.5
Mesencephalic trigeminal nucleusipsiMe50.5
Medial septal nucleusipsiMS-0.5
Substantia innominata ventral partipsiSIV-0.5
Lateral preoptic areaipsiLPO1
Medial preoptic areaipsiMPA3
Dorsomedial hypothalamic nucleusipsiDMHy0
Preoptic medial regionipsiPMeR3
Lateral hypothalamic areaipsiLH1.5
Lateral hypothalamic area anterior partipsiLHAa0.5
Lateral hypothalamic area medial partipsiLHAm3
Lateral hypothalamic area ventral partipsiLHAvp3
Lateral hypothalamic area ventromedial partipsiLHvm3
Medial division of the hypothalamusipsiMdH1
Anterior hypothalamic areaipsiAHA1
Area periventricularis hypothalamica communis [Regio hypothalamus caudalis]ipsiPeRHC1
Dorsal hypothalamic areaipsiDA1
Dorsomedial hypothalamic nucleus anterior partipsiDMA1
Posterior hypothalamic nucleusipsiPH-0.5
Ventromedial hypothalamic nucleusipsiVMH0.5
Mediobasal hypothalamus anterior partipsiMeHypoAnt0.5
Mediobasal hypothalamus posterior partipsiMeHypoP0.5
Arcuate nucleusipsiArc0.5
Paraventricular nucleus of the hypothalamus magnocellular division anterior magnocellular partipsiPaAMa1
Paraventricular hypothalamic nucleus parvicellular division dorsal partipsiPaPcD1
Paraventricular hypothalamic nucleus lateral parvocellular partipsiLPPa1.5
Paraventricular hypothalamic nucleus anterior parvicellular part [Periventricular zone anterior region]ipsiPaAP1.5
Posterior magnocellular subdivision of the paraventricular hypothalamic nucleusipsiPaPoM1
Paraventricular nucleus medial parvocellular partipsiPaMep1.5
Suprachiasmatic nucleusipsiSCh0.5
Supraoptic nucleus [Supraoptic region]ipsiSO1
Rostral hypothalamusipsiRHYPO3
Premammillary nucleusipsiPMAN0
Premammillary nucleus ventral partipsiPMV-0.5
Perifornical nucleusipsiPeF1.5
Retrochiasmatic areaipsiRCh1.5
Mediodorsal thalamic nucleusipsiMD3
Tuber cinereum areaipsiTC1.5
Basal nucleusipsiBnc1
Lateral amygdaloid nucleusipsiLA1
Bed nucleus of the stria terminalisipsiBST3
Bed nucleus of the stria terminalis lateral divisionipsiBSTL2
Bed nucleus of the stria terminalis medial divisionipsiBSTM3
Central amygdaloid nucleusipsiCe1
Central amygdaloid nucleus lateral divisionipsiCeL-0.5
Central amygdaloid nucleus medial divisionipsiCeM-0.5
Anterior amygdaloid areaipsiAA-0.5
Medial amygdaloid nucleusipsiMe-0.5
Amygdalohippocampal areaipsiAHi-0.5
Field CA2 of hippocampus ventral partipsiCA2V2
Piriform cortexipsiPir-0.5
Anterior commissureipsiac-2
Accessory olfactory bulbipsiAOB-0.5
Stria terminalis lateral partipsistL-2
Stria terminalis medial partipsistM-2

Input from

NameSideAbbr.WeightDetails
MesencephalonipsiMEC3
Periventricular gray matteripsiPVG2.5
Substantia nigra compact partipsiSNC3
Substantia nigra compact part lateral tieripsiSNCL3
Substantia nigra compact part medial tieripsiSNCM2
Substantia nigra lateral partipsiSNL1
Ventral tegmental area A10ipsiVTA3
Retrorubral nucleusipsiRR1
Nucleus of the horizontal limb of the diagonal bandipsiHDB1
Substantia innominataipsiSI3
Substantia innominata ventral partipsiSIV-0.5
Intermediate hypothalamic cell groupsipsiIHCG2.5
Medial preoptic areaipsiMPA2
Dorsomedial hypothalamic nucleusipsiDMHy2
Lateral zoneipsiLHA0
Lateral hypothalamic areaipsiLH3
Lateral hypothalamic area perifornical partipsiPFx3
Anterior hypothalamic areaipsiAHA2
Dorsal hypothalamic areaipsiDA2
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM3
Dorsomedial hypothalamic nucleus dorsomedial partipsiDMDM3
Ventromedial hypothalamic nucleusipsiVMH2
Ventromedial hypothalamic nucleus ventrolateral partipsiVMHVL2
Arcuate nucleusipsiArc2
Paraventricular hypothalamic nucleus anterior parvicellular part [Periventricular zone anterior region]ipsiPaAP-0.5
Ventral part of the paraventricular hypothalamic nucleus anterior parvicellular part [Periventricular zone anterior region]ipsivPaAP-0.5
Adjacent to the ventral part of the paraventricular hypothalamic nucleus anterior parvicellular part [Periventricular zone anterior region]ipsiPaAPav-0.5
Periventricular anterioripsiPeriVA-0.5
Paraventricular hypothalamic nucleusipsiPa2
Anterior part of periventricular parvocellular subdivision of paraventricular hypothalamic nucleusipsiPVPapvA-0.5
Periventricular tuberalipsiPeriVT-0.5
Premammillary nucleus dorsal partipsiPMD2
Premammillary nucleus ventral partipsiPMV2
Supramammillar nucleusipsiSuM-0.5
Perifornical nucleusipsiPeF-0.5
Anterior group of the dorsal thalamusipsiATN-0.5
Parafascicular thalamic nucleus medial partipsiPFM2
Posterior thalamic nuclear groupipsiPo2
Suprageniculate thalamic nucleusipsiSG2
Mediodorsal thalamic nucleusipsiMD2
Mediodorsal thalamic nucleus lateral partipsiMDL-0.5
Paratenial thalamic nucleusipsiPT2
Paraventricular thalamic nucleusipsiPV-0.5
Paraventricular thalamic nucleus anterior partipsiPVA2
Paraventricular thalamic nucleus anterior part ventral portionipsiPVAV3
Reuniens thalamic nucleusipsiRe-0.5
Subparafascicular thalamic nucleusipsiSPF3
Zona incertaipsiZI0
HabenulaipsiHAB2
Posterior basolateral nucleusipsiBLP-0.5
Posterior basomedial nucleusipsiBMP-0.5
Posterior part of the lateral nucleusipsiLAP-0.5
Bed nucleus of the stria terminalis lateral division dorsal partipsiBSTLD-0.5
Central amygdaloid nucleusipsiCe-1
Central amygdaloid nucleus lateral division capsular partipsiCeC-0.5
Amygdalopiriform transition areaipsiAPir1
Amygdalopiriform transition area posteromedial partipsiAPir_PM2
Posterior amygdaloid nucleusipsiCOAp-0.5
Nucleus of the lateral olfactory tract layer 2ipsiLOTL21
Nucleus of the lateral olfactory tract layer 3ipsiLOTL31
Medial extended amygdalaipsiMEXA-0.5
Medial amygdaloid nucleus anterodorsal partipsiMeAD-0.5
Medial amygdaloid nucleus anteroventral partipsiMeAV2
Posteromedial cortical nucleusipsiPMCo-0.5
Ventral pallidum dorsolateral partipsiVPdl-0.5
Ventral pallidum ventromedial partipsiVPvm-0.5
Hippocampal regionsipsiHIPPR-0.5
Field CA1 of hippocampusipsiCA11.5
Field CA1 of hippocampus central partipsiCA1c2.5
Field CA1 of hippocampus layer stratum pyramidaleipsiCA1pyr-0.5
Field CA1 of hippocampus medial partipsiCA1m1
Field CA1 of hippocampus temporal partipsiCA1t1
Field CA3 of hippocampusipsiCA3-0.5
Intermediate subiculum dorsal partipsiSidp1
Intermediate subiculum middle partipsiSimp2
Intermediate subiculum ventral partipsiSivp2
Subiculum ventral partipsiSv1
Subiculum lateral ventral partipsiSvl-0.5
Subiculum ventral part caudal subdivisionipsiSvc2.5
Subiculum ventral part medial partipsiSvm2
Subiculum ventral part rostral subdivisionipsiSvr1.5
Dorsolateral entorhinal cortexipsiDLEnt1
Lateral entorhinal cortex ventromedial partipsiVMEAL1
Ventrolateral entorhinal cortexipsiVLENT1
Ventrolateral entorhinal cortex anterior partipsiVLENTA-0.5
Ventrolateral entorhinal cortex layersipsiVLENTL1
Posterior prepiriform cortexipsiPPPC-0.5
Infralimbic cortexipsiIL3
Agranular insular cortex posterior partipsiAIP-0.5
Medial geniculate nucleus medial partipsiMGM2
Intermediate hypothalamic cell groupscontraIHCG-0.5
Dorsomedial hypothalamic nucleuscontraDMHy-0.5
Anterior hypothalamic areacontraAHA-0.5
Dorsal hypothalamic areacontraDA-0.5
Ventromedial hypothalamic nucleuscontraVMH-0.5
Ventromedial hypothalamic nucleus ventrolateral partcontraVMHVL-0.5
Paraventricular hypothalamic nucleus anterior parvicellular part [Periventricular zone anterior region]contraPaAP-0.5
Ventral part of the paraventricular hypothalamic nucleus anterior parvicellular part [Periventricular zone anterior region]contravPaAP-0.5
Adjacent to the ventral part of the paraventricular hypothalamic nucleus anterior parvicellular part [Periventricular zone anterior region]contraPaAPav-0.5
Paraventricular hypothalamic nucleuscontraPa-0.5
Anterior part of periventricular parvocellular subdivision of paraventricular hypothalamic nucleuscontraPVPapvA-0.5
Perifornical nucleuscontraPeF-0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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