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Rat connectome

Suprageniculate thalamic nucleus left

Abbreviation	SG
Color
Superior regions	Lateral group of the dorsal thalamus

Synonyms	Abbr.	Language
	SGN
Suprageniculate nucleus	SG	Eng
Suprageniculate thalamic nucleus	SG	Eng
Suprageniculate nucleus

Subregions	Side
Caudal suprageniculate thalamic nucleus	left
Lateral suprageniculate thalamic nucleus	left
Rostral suprageniculate thalamic nucleus	left
Dorsal suprageniculate thalamic nucleus	left
Lateral medial suprageniculate thalamic nucleus	left
Suprageniculate-limitans complex	left

Output to

Name	Side	Abbr.	Weight
Central gray	ipsi	CG	-1
Medial paralemniscal nucleus	ipsi	MPL	2
Nucleus of Darkschewitsch	ipsi	Dk	0
Oculomotor nucleus	ipsi	3	1
Dorsolateral pontine nucleus	ipsi	DLPn	-0.5
External cortex of the inferior colliculus	ipsi	ECIC	2
Dorsal cortex of the inferior colliculus	ipsi	DCIC	-1
Nucleus of the brachium of the inferior colliculus	ipsi	BIC	-1
Optic nerve layer of the superior colliculus	ipsi	Op	-0.5
Superior colliculus superficial layers commissural neurons	ipsi	SCscn	-0.5
Superior colliculus intermediate and deep layers	ipsi	SCidLa	-0.5
Superior colliculus intermediate layers	ipsi	SCi	-0.5
Intermediate gray layer of the superior colliculus	ipsi	InG	0
Superior colliculus deep layers	ipsi	SCd	-1
Deep gray layer of the superior colliculus	ipsi	DpG	3
Superior colliculus medial part	ipsi	mSC	1
Peripeduncular area	ipsi	PPA	1
Edinger Westphal nucleus	ipsi	EW	0
Pontine nuclei lateral part	ipsi	BPNL	-0.5
Pontine nucleus medial part	ipsi	BPNm	-0.5
Pontine nucleus ventral part	ipsi	BPNv	-0.5
Basal forebrain	ipsi	BAF	-0.5
Basal nucleus Meynert medial part	ipsi	Bmp	1
Rostral part of suprachiasmatic nucleus ventrolateral part	ipsi	SCnVLR	2
Parafascicular thalamic nucleus	ipsi	PF	-0.5
Posterior thalamic nuclear group	ipsi	Po	2
Reticular thalamic nucleus	ipsi	Rt	-1
Dorsal part of the caudal reticular thalamic nucleus	ipsi	RtDc	1
Dorsal part of the caudal reticular thalamic nucleus	ipsi	RtDc	1
Reticular thalamic nucleus dorsal part	ipsi	RtD	1
Bottom of the reticular thalamic nucleus	ipsi	RtB	-0.5
Subparafascicular thalamic nucleus	ipsi	SPF	-1
Subparafascicular thalamic nucleus caudal part	ipsi	SPFc	1
Subparafascicular thalamic nucleus medial part	ipsi	SPFme	1
Subparafascicular thalamic nucleus rostral part	ipsi	SPFr	1
Pretectal region	ipsi	PRT	2
Amygdaloid complex	ipsi	AC	3
Laterobasal nuclear complex	ipsi	LBNC	-0.5
Accessory basal nucleus	ipsi	AB	2
Basal nucleus ventral divison	ipsi	BncV	1
Basolateral amygdaloid nucleus	ipsi	BL	-0.5
Basolateral nucleus rostral part	ipsi	BLRP	-0.5
Basomedial amygdaloid nucleus	ipsi	BM	-0.5
Anterior basomedial nucleus	ipsi	BMA	0.5
Lateral amygdaloid nucleus	ipsi	LA	2
Dorsolateral part of the lateral nucleus	ipsi	LaDL	2
Lateral amygdaloid nucleus posterolateral part	ipsi	LApL	-0.5
Lateral nucleus medial part	ipsi	LAM	1
Lateral nucleus rostral part	ipsi	LAR	-0.5
Lateral nucleus ventral portion	ipsi	LAVp	-0.5
Ventrolateral part of the lateral nucleus	ipsi	LaVL	1.5
Bed nucleus of the stria terminalis intraamygdaloid division	ipsi	BSTIA	2
Central amygdaloid nucleus	ipsi	Ce	2
Central amygdaloid nucleus dorsal part	ipsi	Ced	-1
Central amygdaloid nucleus lateral division	ipsi	CeL	-0.5
Central amygdaloid nucleus lateral division capsular part	ipsi	CeC	0.5
Central amygdaloid nucleus pallidal part	ipsi	CePa	2
Central amygdaloid nucleus putamenal part	ipsi	CePu	2
Central amygdaloid nucleus ventral part	ipsi	CeV	-0.5
Anterior amygdaloid area	ipsi	AA	2
Cortical amygdaloid nucleus	ipsi	CAn	2
Anterior cortical amygdaloid nucleus	ipsi	ACo	-0.5
Medial amygdaloid nucleus	ipsi	Me	2
Bed nucleus of the accessory olfactory tract	ipsi	BAOT	2
Amygdalostriatal transition area	ipsi	AStr	2
Amygdalostriatal transition area rostrocaudal part	ipsi	AStrrc	-0.5
Rostral part of claustrum	ipsi	RCl	2
Globus pallidus	ipsi	GP	2
Caudate putamen	ipsi	CPu	2
Anteroventral segment of the striatum	ipsi	CPuav	-0.5
Medial striatum	ipsi	CPum	-1
Caudal striatum	ipsi	CPuc	-0.5
Caudate putamen caudolateral part	ipsi	CPucl	1
Dorsal striatum	ipsi	CPud	2
Posterior caudate putamen	ipsi	CPup	2
Posterior caudate putamen medial part	ipsi	CPupm	2
Ventral striatum	ipsi	CPuv	-0.5
Subthalamic nucleus	ipsi	STh	-1
Frontal cortex area 2	ipsi	Fr2	1
Parietal cortex posterior area dorsal part	ipsi	ParPD	-0.5
Temporal association area 2	ipsi	Te2	2
Temporal association area 2 dorsal part	ipsi	Te2D	3
Dorsal fringe and margin of the temporal association area 2 dorsal part	ipsi	Te2Ddfm	-0.5
Temporal association area 2 dorsal part upper half of layer 1	ipsi	Te2DuhL1	-0.5
Temporal association area 2 dorsal part lower layer 3	ipsi	Te2DLL3	1
Temporal association area 2 dorsal part layer 4	ipsi	Te2DL4	1
Temporal association area 2 dorsal part upper half of layer 4	ipsi	Te2DuhL4	-0.5
Temporal association area 2 layer 1	ipsi	Te2L1	1
Temporal association area 2 layer 3	ipsi	Te2L3	1
Temporal association area 2 layer 4	ipsi	Te2L4	1
Temporal association area 3	ipsi	Te3	2
Temporal association area 3 layer 1	ipsi	Te3L1	3
Temporal association area 3 layer 3	ipsi	Te3L3	3
Temporal association area 3 layer 4	ipsi	Te3L4	3
Temporal association area 3 ventral part	ipsi	Te3V	-0.5
Temporal association area 3 middle range of the ventral half layer 3	ipsi	Te3VhmrL3	-0.5
Temporal association area 3 middle range of the ventral half layer 4	ipsi	Te3VhmrL4	2
Temporal association area 3 ventral part upper half of layer 1	ipsi	Te3VuhL1	-0.5
Temporal association area 3 ventral part layer 3	ipsi	Te3VL3	-0.5
Temporal association area 3 ventral part lower layer 3	ipsi	Te3VLL3	-0.5
Temporal association area 3 ventral part layer 4	ipsi	Te3VL4	-0.5
Temporal association area 3 ventral part layer 6	ipsi	Te3VL6	-0.5
Temporal association area 3 ventral part upper half of layer 6	ipsi	Te3VuhL6	-0.5
Temporal association area 3 ventral part rostral half	ipsi	Te3VRh	3
Temporal association cortex 1	ipsi	TeA	2
Caudal part of temporal association cortex 1	ipsi	Teca	2
Dorsal temporal association cortex 1	ipsi	Ted	2
Temporal association cortex 1 dorsal fringe	ipsi	TeAdf	-0.5
Temporal association cortex 1 dorsal fringe and margin	ipsi	TeAdfm	-0.5
Dorsal fringe of the middle part of area Te1 layer 3	ipsi	TeAmDfL3	1
Dorsal fringe of the middle part of area Te1 layer 4	ipsi	TeAmDfL4	1
Dorsal fringe of the rostral part of area Te1 lower layer 3	ipsi	TeArDfLL3	1
Dorsal fringe of the rostral part of area Te1 lower layer 4	ipsi	TeArDfLL4	1
Temporal association cortex 1 rostral half	ipsi	TeAroh	3
Temporal association cortex 1 middle range of the ventral half layer 3	ipsi	TeAvhmrL3	-0.5
Temporal association cortex 1 middle range of the ventral half layer 4	ipsi	TeAvhmrL4	-0.5
Ventral temporal association cortex	ipsi	Tev	2
Base of the temporal cortical area	ipsi	TEB	2
Temporoparietal cortex multisensoric zone	ipsi	MZTPcx	2
Primary auditory cortex	ipsi	Au1	2
Dorsoventral primary auditory cortex layer 1	ipsi	Au1DVL1	3
Primary auditory cortex layers	ipsi	Au1La	-0.5
Primary auditory cortex layer 1	ipsi	Au1L1	3
Primary auditory cortex lower half of layer 1	ipsi	Au1LL1	2
Primary auditory cortex superficial half of layer 1	ipsi	Au1sL1	4
Primary auditory cortex layer 2	ipsi	Au1L2	1.5
Primary auditory cortex layer 3	ipsi	Au1L3	3
Primary auditory cortex layer 4	ipsi	Au1L4	3
Primary auditory cortex layer 5	ipsi	Au1L5	2.5
Primary auditory cortex layer 6	ipsi	Au1L6	2
Polyaud	ipsi	POLYAU	2
Secondary auditory cortex dorsal area	ipsi	AuD	-0.5
Insular cortex	ipsi	ICX	1
Agranular insular cortex	ipsi	AI	1
Agranular insular cortex caudal part	ipsi	AIC	1
Caudal half of agranular insular area in the fundus and dorsal lip of rhinal sulcus	ipsi	AIChF	3
Most rostral part of the posterior agranular insular cortex	ipsi	AIPpmr	1
Visceral dysgranular insular cortex	ipsi	DIv	-0.5
Granular insular cortex	ipsi	GI	1
Granular insular cortex caudal part	ipsi	GIC	2
Further rostrally to the caudal edge of the insular cortex	ipsi	ICXRcaE	-0.5
Perirhinal cortex	ipsi	A35	2
Perirhinal cortex anterior portion	ipsi	PRha	2
Perirhinal cortex dorsal portion	ipsi	PRhd	-0.5
Dorsal bank of the perirhinal cortex layer 1	ipsi	PRhdL1	1
Perirhinal cortex layer 3	ipsi	A35L3	3
Perirhinal cortex layer 4	ipsi	A35L4	3
Ectorhinal cortex	ipsi	A36	-0.5
Medial agranular prefrontal cortex	ipsi	AGm	-0.5
Medial agranular prefrontal cortex caudal part	ipsi	cAGm	-0.5
Medial agranular prefrontal cortex caudal part layer 1	ipsi	cAGmL1	3
Medial agranular prefrontal cortex caudal part layer 3	ipsi	cAGmL3	3
Medial agranular prefrontal cortex caudal part layer 4	ipsi	cAGmL4	3
Medial agranular prefrontal cortex rostral part	ipsi	rAGm	-0.5
Medial agranular prefrontal cortex rostral part layer 1	ipsi	rAGmL1	3
Secondary somatosensory cortex	ipsi	S2	3
Secondary somatosensory cortex layer 1	ipsi	S2L1	-0.5
Secondary somatosensory cortex ventral half	ipsi	S2vh	1
Secondary somatosensory cortex border region	ipsi	S2br	1
Secondary visual cortex lateral area	ipsi	V2L	1
Lateral orbital cortex	ipsi	LO	1
Dorsolateral pontine nucleus	contra	DLPn	0
External cortex of the inferior colliculus	contra	ECIC	1
Intermediate gray layer of the superior colliculus	contra	InG	0
Superior colliculus medial part	contra	mSC	0
Peripeduncular area	contra	PPA	0
Pontine nuclei lateral part	contra	BPNL	0
Pontine nucleus medial part	contra	BPNm	0
Pontine nucleus ventral part	contra	BPNv	0
Parafascicular thalamic nucleus	contra	PF	-0.5
Subparafascicular thalamic nucleus caudal part	contra	SPFc	0.5
Subparafascicular thalamic nucleus medial part	contra	SPFme	0.5
Subparafascicular thalamic nucleus rostral part	contra	SPFr	0.5
Pretectal region	contra	PRT	1

Input from

Name	Side	Abbr.	Weight
Dorsal nucleus of the lateral lemniscus	ipsi	DLL	1
Periaqueductal gray	ipsi	PAG	3
Dorsolateral periaqueductal gray	ipsi	DLPAG	3
Inferior colliculus	ipsi	ICOL	-0.5
Central nucleus of the inferior colliculus	ipsi	CIC	1
External cortex of the inferior colliculus	ipsi	ECIC	1
External cortex of the inferior colliculus layer 2	ipsi	ECICL2	-0.5
External cortex of the inferior colliculus medial part	ipsi	ECICm	1
Dorsal cortex of the inferior colliculus	ipsi	DCIC	1
Shell region of the central nucleus of the inferior colliculus	ipsi	SIC	2
Superior colliculus	ipsi	SC	3
Superior colliculus superficial layers	ipsi	SCs	-0.5
Optic nerve layer of the superior colliculus	ipsi	Op	3
Superficial gray layer of the superior colliculus	ipsi	SuG	2
Superior colliculus superficial layers commissural neurons	ipsi	SCscn	-0.5
Intermediate gray layer of the superior colliculus	ipsi	InG	2
Superior colliculus deep layers	ipsi	SCd	3
Deep gray layer of the superior colliculus	ipsi	DpG	2
Stratum album intermediale of the medial superior colliculus	ipsi	mSCLsai	3
Stratum album profundum of the medial superior colliculus	ipsi	mSCLsap	3
Peripeduncular area	ipsi	PPA	0
Pontine reticular nucleus caudal part	ipsi	PNC	2
Spinal trigeminal nucleus	ipsi	Sp5nc	-0.5
Spinal trigeminal nucleus dorsal part	ipsi	Sp5ncD	1
Spinal vestibular nucleus	ipsi	SpVe	-0.5
Vestibular nuclei	ipsi	Vnc	3
Superior vestibular nucleus	ipsi	SuVe	0
Medial vestibular nucleus caudal part	ipsi	MVeP	0
Medial vestibular nucleus ventromedial part	ipsi	MVevm	0
Dorsal column nuclei	ipsi	DCN	1
Cuneate nucleus	ipsi	Cu	1
Gracile	ipsi	Gra	1
Gracile nucleus principal part	ipsi	Gr	-0.5
Ventromedial hypothalamic nucleus	ipsi	VMH	-1
Posterior intralaminar thalamic nucleus	ipsi	PIL	2
Subparafascicular thalamic nucleus	ipsi	SPF	2
Subparafascicular thalamic nucleus magnocellular part	ipsi	SPFm	1
Subparafascicular thalamic nucleus rostral part	ipsi	SPFr	1
Lateral amygdaloid nucleus	ipsi	LA	2
Amygdalostriatal transition area	ipsi	AStr	-0.5
Globus pallidus	ipsi	GP	-0.5
Caudal globus pallidus	ipsi	GPc	2
Retrosplenial agranular cortex	ipsi	RSA	3
Temporal association area 2	ipsi	Te2	1
Temporal association area 2 dorsal part layer 3	ipsi	Te2DL3	-0.5
Temporal association area 2 dorsal part layer 4	ipsi	Te2DL4	-0.5
Temporal association area 2 dorsal part layer 5	ipsi	Te2DL5	-0.5
Temporal association area 2 dorsal part layer 6	ipsi	Te2DL6	-0.5
Temporal association area 3	ipsi	Te3	1
Temporal association cortex 1 layer 5	ipsi	TeAL5	0
Temporal association cortex 1 layer 6	ipsi	TeAL6	0
Ventral temporal association cortex	ipsi	Tev	2
Primary auditory cortex	ipsi	Au1	3
Perirhinal cortex anterior portion	ipsi	PRha	3
Perirhinal cortex anterior portion layer 5	ipsi	PRhaL5	2.5
Perirhinal cortex anterior portion layer 6	ipsi	PRhaL6	2.5
Secondary somatosensory cortex	ipsi	S2	-3
Secondary somatosensory cortex caudal part	ipsi	S2C	-0.5
Anterolateral area of subdivision 18a in lateral extrastriate cortex	ipsi	ALV2L	-0.5
Lateromedial area of subdivision 18a in lateral extrastriate cortex	ipsi	LMV2L	-0.5
Anterolateral part of the lateral extrastriate cortex layers	ipsi	VISxLAL	-0.5
Lateromedial part of the lateral extrastriate cortex	ipsi	VISLLM	-0.5
Medial geniculate nucleus medial part	ipsi	MGM	-1
Optic nerve layer of the superior colliculus	contra	Op	1.5
Peripeduncular area	contra	PPA	0
Spinal vestibular nucleus	contra	SpVe	2
Dorsolateral part of the medial vestibular nucleus caudal part	contra	MVePDL	-0.5
Subparafascicular thalamic nucleus magnocellular part	contra	SPFm	3
Lateral cervical nucleus	contra	LatC	2
Spinal cord layer 3 C1	contra	SCL3C1	2
Spinal cord layer 4 C1	contra	SCL4C1	2
Spinal cord layer 1 C1	contra	SCL1C1	2
Spinal cord layer 2 C1	contra	SCL2C1	2
Spinal cord layer 3 C2	contra	SCL3C2	2
Spinal cord layer 4 C2	contra	SCL4C2	2
Spinal cord layer 1 C2	contra	SCL1C2	2
Spinal cord layer 2 C2	contra	SCL2C2	2

Key for weights

Value	Weight
-3	unknown
-2	fibers of passage
-1	not clear
-0.5	exists
0	not present
0.5	very light
1	light / sparse
1.5	light / moderate
2	moderate / dense
2.5	moderate / strong
3	strong
4	very strong