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Rat connectome



Primary somatosensory cortex layer 4 left


Abbreviation
S1L4
Color       
Superior regionsPrimary somatosensory cortex layers

SynonymsAbbr.Language
Primary somatosensory cortex layer 4S1L4 

SubregionsSide
Primary somatosensory cortex layer 4 excitatory neuronsleft
Primary somatosensory cortex layer 4 interneuronsleft
Primary somatosensory cortex upper portion of layer 4left

Output to

NameSideAbbr.WeightDetails
Ventrobasal complexipsiVB2
Caudate putamenipsiCPu2
Central striatumipsiCPuce2
Dorsal striatumipsiCPud2
Dorsolateral striatumipsiCPudl2
Striatal matrix compartmentipsiSMC3
Striatal patch compartmentipsiSPC0
Lateral agranular prefrontal cortexipsiAGl2
Lateral agranular prefrontal cortex layer 3ipsiAGlL32
Primary somatosensory cortexipsiS11
Primary somatosensory cortex layer 1ipsiS1L10
Primary somatosensory cortex layer 3ipsiS1L32
Primary somatosensory cortex hindlimb region lateral partipsiS1HLL1
Secondary somatosensory cortexipsiS23
Secondary somatosensory cortex layer 3ipsiS2L33
Secondary somatosensory cortex layer 4ipsiS2L43
Striatal patch compartmentcontraSPC0
Lateral parietal association cortexcontraLPtA1.5
Primary somatosensory cortexcontraS12
Primary somatosensory cortex layer 5contraS1L5-0.5
Primary somatosensory cortex layer 4contraS1L41.5
Primary somatosensory cortex forelimb wrist region layer 5bcontraS1FLWL5b3
Primary somatosensory cortex hindlimb region lateral partcontraS1HLL0.5
Primary somatosensory cortex periangular zone arround barrel fieldscontraS1pg1
Secondary somatosensory cortexcontraS21
Spinal cordcontraMES1

Input from

NameSideAbbr.WeightDetails
ThalamusipsiT3
Centre median nucleusipsiCeMe1.5
Parafascicular thalamic nucleusipsiPF1.5
Posterior thalamic nuclear group medial partipsiPoMe3
Ventral part of the posteromedial thalamic nucleusipsiPoMeV-0.5
Mediodorsal thalamic nucleusipsiMD-0.5
Ventrobasal complexipsiVB2
Ventral posteromedial thalamic nucleusipsiVPM3
Dorsomedial portion of the ventral posteromedial thalamic nucleusipsiVPMdm2
Main thalamic relay nucleiipsiVBMTRN-0.5
Ventral posterolateral thalamic nucleus parvicellular partipsiVPLpc3
Frontal association cortexipsiFrA0
Frontal cortex area 2ipsiFr21
Frontal cortex area 3ipsiFr30
Border of frontal cortex 2ipsiFr2B1.5
Primary somatosensory cortex layer 2 pyramidal neuronsipsiS1L2py-0.5
Primary somatosensory cortex layer 3 pyramidal neuronsipsiS1L3py-0.5
Primary somatosensory cortex hindlimb region lateral partipsiS1HLL3
Anterolateral area of subdivision 18a in lateral extrastriate cortexipsiALV2L-0.5
Lateromedial area of subdivision 18a in lateral extrastriate cortexipsiLMV2L-0.5
Anterior portion of the anterolateral part of the lateral extrastriate cortexipsiVISLaLA1
Frontal association cortexcontraFrA0
Frontal cortex area 2contraFr21.5
Frontal cortex area 3contraFr30
Border of frontal cortex 2contraFr2B3
Lateral parietal association cortexcontraLPtA1.5
Primary somatosensory cortexcontraS11.5
Primary somatosensory cortex layer 4contraS1L41.5
Primary somatosensory cortex forelimb region forepawcontraS1FP-0.5
Primary somatosensory cortex hindlimb region lateral partcontraS1HLL0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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