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Rat connectome

Centre median nucleus left

Abbreviation	CeMe
Color
Superior regions	Intralaminar nuclei of the dorsal thalamus

Synonyms	Abbr.	Language
Centermedian-parafascicular nucleus	CM-Pf
Centre median		Eng
Nucleus thalamic center median		Eng
Centromedian thalamus		Eng
Centre median nucleus	CeMe	Eng
Central median thalamic nucleus		Eng

Output to

Name	Side	Abbr.	Weight
Reticular thalamic nucleus rostral part	ipsi	Rtr	2
Amygdaloid complex	ipsi	AC	0
Basal ganglia	ipsi	BG	3
Accumbens nucleus core	ipsi	AcbC	2
Caudate putamen	ipsi	CPu	2
Medial part of the caudate putamen	ipsi	CPuMed	-0.5
Parahippocampal region	ipsi	PHR	1
Cingulate cortex	ipsi	Cg	1
Prelimbic cortex dorsal part	ipsi	PrLd	1
Frontal association cortex layer 1	ipsi	FrALL1	1.5
Frontal association cortex layer 4	ipsi	FrALL4	1.5
Frontal association cortex layer 5	ipsi	FrALL5	1.5
Frontal association cortex layer 6	ipsi	FrALL6	1.5
Frontal cortex area 2 layer 4	ipsi	Fr2L4	1.5
Frontal cortex area 2 layer 1	ipsi	Fr2L1	1.5
Frontal cortex area 2 layer 5	ipsi	Fr2L5	1.5
Frontal cortex area 2 layer 6	ipsi	Fr2L6	1.5
Parietal association cortex layer 4	ipsi	ParPLa4	1.5
Parietal association cortex layer 5	ipsi	ParPLa5	1.5
Parietal association cortex layer 6	ipsi	ParPLa6	1.5
Parietal association cortex layer 1	ipsi	ParPLa1	1.5
Caudal half of agranular insular area in the fundus and dorsal lip of rhinal sulcus	ipsi	AIChF	2
Agranular insular cortex dorsal part layer 4	ipsi	AIDL4	1.5
Agranular insular cortex dorsal part layer 1	ipsi	AIDL1	1.5
Agranular insular cortex layer 1	ipsi	AIL1	1.5
Agranular insular cortex layer 4	ipsi	AIL4	1.5
Motoric regions	ipsi	M	3
Lateral agranular prefrontal cortex layer 5	ipsi	AGlL5	1.5
Lateral agranular prefrontal cortex layer 6	ipsi	AGlL6	1.5
Medial agranular prefrontal cortex layer 1	ipsi	AGmL1	1.5
Medial agranular prefrontal cortex layer 4	ipsi	AGmL4	1.5
Medial agranular prefrontal cortex layer 5	ipsi	AGmL5	1.5
Medial agranular prefrontal cortex layer 6	ipsi	AGmL6	1.5
Primary somatosensory cortex	ipsi	S1	3
Rostral whisker area	ipsi	RS1BF	-0.5
Primary somatosensory cortex layer 5	ipsi	S1L5	1.5
Primary somatosensory cortex layer 6	ipsi	S1L6	1.5
Primary somatosensory cortex layer 4	ipsi	S1L4	1.5
Primary somatosensory cortex layer 1	ipsi	S1L1	1.5
Dorsolateral part of the primary somatosensory cortex	ipsi	S1DL	1
Secondary somatosensory cortex	ipsi	S2	3
Visual regions	ipsi	VR	3

Input from

Name	Side	Abbr.	Weight
Ventral periaqueductal gray	ipsi	VPAG	0
Periventricular gray matter	ipsi	PVG	0
Inferior colliculus	ipsi	ICOL	0.5
Superior colliculus	ipsi	SC	0.5
Peduncularpontine nucleus	ipsi	PPN	-0.5
Laterodorsal tegmental nucleus	ipsi	LDTg	1
Dorsal tegmental nucleus	ipsi	DTg	0
Pedunculopontine tegmental nucleus pars compacta	ipsi	PPNC	2
Pontine reticular nucleus	ipsi	PRN	-0.5
Cuneiforme nucleus	ipsi	CnF	-0.5
Cuneiforme nucleus ventral part	ipsi	CnFV	2
Peribrachial cuneiforme nucleus	ipsi	CnFPB	2
Gigantocellular reticular nucleus	ipsi	Gi	3
Dorsal raphe nucleus	ipsi	DR	0
Median raphe nucleus	ipsi	MnR	0
Pontine raphe nucleus	ipsi	PnR	0
Raphe magnus nucleus	ipsi	RMg	0
Anterior cortical amygdaloid nucleus	ipsi	ACo	0.5
Caudate putamen	ipsi	CPu	-0.5
Rostral forelimb area of Smith	ipsi	RFA	-0.5

Key for weights

Value	Weight
-3	unknown
-2	fibers of passage
-1	not clear
-0.5	exists
0	not present
0.5	very light
1	light / sparse
1.5	light / moderate
2	moderate / dense
2.5	moderate / strong
3	strong
4	very strong