University of Rostock

Department of Anatomy

Neuroscience Group

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Rat connectome



Central striatum left


Abbreviation
CPuce
Color       
Superior regionsCaudate putamen

SynonymsAbbr.Language
 Strce 
Central striatumCPuceEng

SubregionsSide
Central striatum chemoarchitectonic compartmentsleft
Ventral one-half of the central part of the striatumleft
Ventral one third of the central striatumleft

Output to

NameSideAbbr.WeightDetails
Substantia nigra A9ipsiSN2
Lateral globus pallidusipsiLGP2
Medial globus pallidusipsiMGP2

Input from

NameSideAbbr.WeightDetails
Substantia nigra A9ipsiSN-0.5
Substantia nigra compact part dorsal tieripsiSNCD2
Substantia nigra lateral partipsiSNL2
Substantia nigra medial partipsiSNM2
Anterior group of the dorsal thalamusipsiATN0
Central medial thalamic nucleusipsiCM2
Centrolateral thalamic nucleusipsiCL2
Centrolateral thalamic nucleus anteromedial partipsiCLAM3
Centrolateral thalamic nucleus caudal partipsiCLc2
Centrolateral thalamic nucleus posterolateral partipsiCLPL3
Caudolateral part of the gelatinosus thalamic nucleusipsiGCL1
Paracentral thalamic nucleusipsiPC3
Parafascicular thalamic nucleus caudal partipsiPFc2
Parafascicular thalamic nucleus dorsolateral partipsiPFdL1
Parafascicular thalamic nucleus intermediate partipsiPFi2
Parafascicular thalamic nucleus rostral partipsiPFr2
Rhomboid thalamic nucleusipsiRh-0.5
Ventrolateral thalamic nucleusipsiVL2
Ventromedial thalamic nucleusipsiVM2
Central ventromedial thalamic nucleusipsiCeVM1
Intralaminar nuclei caudal partipsiILNc-0.5
Parafascicular nucleusipsiPFa-0.5
Laterodorsal thalamic nucleus dorsomedial partipsiLDDM1
Medial thalamic zoneipsiMTZ0
Ventral thalamus dorsomedial partipsiVNTdm-0.5
Basolateral nucleus rostral partipsiBLRP3
Posterior basolateral nucleusipsiBLP1
Prelimbic cortexipsiPrL-0.5
Frontal cortex area 1ipsiFr12
Frontal cortex area 2ipsiFr22
Gustatory dysgranular insular cortexipsiDIg2
Somatomotoric regionsipsiSMR-0.5
Motoric regionsipsiM2
Medial prefrontal cortexipsimPFC-0.5
Motoric regions layer 5ipsiMRL53
Motoric regions layer 6ipsiMRL62
Motoric regions layer 4ipsiMRL42
Primary somatosensory cortexipsiS12
Primary somatosensory cortex layer 5ipsiS1L53
Primary somatosensory cortex layer 6ipsiS1L62
Primary somatosensory cortex layer 4ipsiS1L42
Primary somatosensory cortex hindlimb regionipsiS1HL2
Lateral orbital cortexipsiLO3
Lateral orbital cortex layer 2ipsiLOLaL22
Lateral orbital cortex layer 3ipsiLOLaL32
Lateral orbital cortex layer 5ipsiLOLaL52
Ventrolateral orbital areaipsiVLO2
Medial geniculate nucleus medial partipsiMGM-0.5
Basolateral nucleus rostral partcontraBLRP0.5
Motoric regionscontraM1
Motoric regions layer 3contraMRL31
Motoric regions layer 5contraMRL51
Primary somatosensory cortex layer 5contraS1L51
Primary somatosensory cortex layer 3contraS1L31

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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