University of Rostock

Department of Anatomy

Neuroscience Group

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Rat connectome



Spinal cord layers T4 left


Abbreviation
SCLT4
Color       
Superior regionsThoracal segment 4

SynonymsAbbr.Language
Spinal cord layers T4SCLT4Eng

SubregionsSide
Area X T4left
Dorsal horn T4left
Ventral horn T4left

Output to

NameSideAbbr.WeightDetails
CerebellumipsiCERE2
Lateral parabrachial nucleus lateral partipsiLPBL0.5
Ventral part of spinal trigeminal nucleus oral partipsiSp5OV-0.5
Nucleus ZipsiZ2
Dorsal thalamusipsiDOR1
Ventrobasal complex medial partipsiVBM1
Lateral posterior thalamic nucleusipsiLP1
Lateral parabrachial nucleus lateral partcontraLPBL1
Ventral part of spinal trigeminal nucleus oral partcontraSp5OV-0.5
Dorsal thalamuscontraDOR2
Superior cervical ganglionipsiAutoSCeG3
Bulbocavernosus muscleipsiMuscBCV-10
Ischiocavernosus muscleipsiMuscicav-10

Input from

NameSideAbbr.WeightDetails
Red nucleusipsiR-0.5
Dorsolateral pontine tegmentumipsiDLPT-0.5
Peduncularpontine nucleusipsiPPN-0.5
Laterodorsal tegmental nucleusipsiLDTg3
Sublaterodorsal tegmental nucleusipsiSLD-0.5
Dorsal tegmental nucleusipsiDTg1
Pedunculopontine tegmental nucleusipsiPPTg2
A5 noradrenaline cellsipsiA52
Locus coeruleus caudal part ventral partipsiLCcV1
Prepositus nucleusipsiPr2
Medial reticular formationipsiRFm-0.5
Midline reticular formationipsiMiRF1
Peribrachial regionipsiPBR-0.5
Koelliker Fuse nucleusipsiKF1
Gigantocellular reticular nucleusipsiGi2
Lateral reticular nucleusipsiLRt-0.5
Medullary reticular nucleus ventral partipsiMdV2
C1 adrenaline cellsipsiC12
C2 adrenaline cellsipsiC22
C3 adrenaline cellsipsiC32
Ambiguus nucleusipsiAmb3
Motor trigeminal nucleusipsiMo53
Vestibular nucleiipsiVnc2
Nucleus of the solitary tractipsiSol-0.5
Nucleus of the solitary tract dorsolateral partipsiSolDL3
Nucleus of the solitary tract ventrolateral partipsiSolVL1
Raphe nucleiipsiRAN-0.5
Raphe magnus nucleusipsiRMg2
Raphe obscurus nucleusipsiROb2
Raphe pallidus nucleusipsiRPa2
Rostral ventrolateral medullaipsiRVLM1
Lateral paragigantocellular nucleusipsiLPGi2
Dorsomedial hypothalamic nucleusipsiDMHy-0.5
Lateral zoneipsiLHA-0.5
Lateral hypothalamic areaipsiLH-0.5
Lateral hypothalamic area rostral partipsiLHro3
Ventromedial hypothalamic nucleusipsiVMH3
Ventromedial hypothalamic nucleus ventral partipsiVMHV1
Arcuate nucleusipsiArc1
Paraventricular nucleus of the hypothalamus magnocellular division posterior magnocellular partipsiPaAMp1
Paraventricular hypothalamic nucleus medial parvicellular part [Periventricular zone anterior region]ipsiPaMP3
Paraventricular hypothalamic nucleus lateral parvocellular partipsiLPPa3
Paraventricular hypothalamic nucleus anterior parvicellular part [Periventricular zone anterior region]ipsiPaAP3
Paraventricular hypothalamic nucleusipsiPa2
Paraventricular hypothalamic nucleus parvocellular divisionipsiPavPo-0.5
Paraventricular hypothalamic nucleus dorsal parvocellular divisionipsiPavPoD3
Paraventricular nucleus ventromedial parvocellular partipsiPaVMp2.5
Paraventricular hypothalamic nucleus periventricular partipsiPapv3
Paraventricular nucleus dorsal partipsiPaDo2.5
Retrochiasmatic areaipsiRCh1
Ventromedial thalamic nucleus dorsolateral partipsiVMDL3
Zona incertaipsiZI2
Zona incerta rostral partipsiZIR2
Red nucleus rostral partcontraRnRo3
Lateral hypothalamic areacontraLH-0.5
Ventromedial hypothalamic nucleus ventral partcontraVMHV0.5
Retrochiasmatic areacontraRCh0.5
Zona incertacontraZI-0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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