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Rat connectome



C2 adrenaline cells left


Abbreviation
C2
Color       
Superior regionsAdrenaline cell group

SynonymsAbbr.Language
C2 cell group Eng
C2 adrenaline cellsC2Eng

SubregionsSide
Caudal part of the C2 adrenaline cellsleft

Output to

NameSideAbbr.WeightDetails
Ventrolateral periaqueductal grayipsiVLPAG2
Red nucleusipsiR0
Substantia nigra A9ipsiSN2
Ventral tegmental area A10 caudomedial partipsiVTACM0
Interfascicular nucleusipsiIF0
Ventral tegmental area A10 medial partipsiVTAM0.5
Locus coeruleusipsiLC2
Nucleus of the solitary tractipsiSol-0.5
Dorsal raphe nucleusipsiDR-0.5
Rostral linear nucleus of the rapheipsiRLi0.5
Central raphe nucleusipsiCRN0.5
Medial septal nucleusipsiMS2
Substantia innominataipsiSI1
Medial preoptic areaipsiMPA1
Tuberomammillary nucleus dorsomedial partipsiTBMdm-0.5
Ventral tuberomammillary nucleusipsiVTM-0.5
Glia limitans ventral to the ventral tuberomammillary nucleusipsiTuMgL-0.5
Dorsomedial hypothalamic nucleusipsiDMHy-0.5
Lateral hypothalamic area perifornical partipsiPFx1
Lateral hypothalamus adjacent to the ventral tuberomammillary nucleusipsiLHVTM-0.5
Medial preoptic anterior regionipsiMPAr2
Anteroventral periventricular nucleus [Anterior hypothalamic area]ipsiAVPe0
Dorsomedial hypothalamic areaipsiDMHyA1
Medial basal hypothalamusipsiMBH-0.5
Ventromedial hypothalamic nucleusipsiVMH1
Paraventricular hypothalamic nucleus lateral parvocellular partipsiLPPa2
Paraventricular hypothalamic nucleus medial parvocellular part ventral partipsiMPPav2
Paraventricular hypothalamic nucleus dorsal partipsiPaD3
Paraventricular hypothalamic nucleusipsiPa3
Mid paraventricular hypothalamic nucleusipsiMiPa2
Paraventricular hypothalamic nucleus magnocellular divisionipsiPaMag1
Paraventricular hypothalamic nucleus parvocellular divisionipsiPavPo3
Paraventricular nucleus medial parvocellular partipsiPaMep-0.5
Paraventricular nucleus medial parvicellular part dorsal zoneipsiPVHmpdo3
Paraventricular hypothalamic nucleus periventricular partipsiPapv3
Paraventricular nucleus anterior partipsiPaan3
Periventricular hypothalamic nucleusipsiPe-0.5
Supraoptic nucleus [Supraoptic region]ipsiSO3
Lateral mammillary nucleusipsiLM-0.5
Premammillary nucleus dorsal partipsiPMD-0.5
Premammillary nucleus ventromedial partipsiPMvm-0.5
Supramammillar nucleus lateral partipsiSuML-0.5
A8 dopamine cells retrorubral groupipsiRRF0.5
A8 dopamine cells retrorubral group medial partipsiRRFm0
Retrochiasmatic areaipsiRCh0
Stria medullaris of the thalamusipsism0
Bed nucleus of the stria terminalis anterior ventral areaipsiBSTAV-0.5
Central amygdaloid nucleusipsiCe2
Fornixipsif-2
Spinal cord layer 3 C4ipsiSCL3C40
Spinal cord layer 4 C4ipsiSCL4C40
Spinal cord layer 1 C4ipsiSCL1C40
Spinal cord layer 2 C4ipsiSCL2C40
Spinal cord layer 3 C5ipsiSCL3C51
Spinal cord layer 4 C5ipsiSCL4C50
Spinal cord layer 1 C5ipsiSCL1C51
Spinal cord layer 2 C5ipsiSCL2C51
Spinal cord layer 3 C6ipsiSCL3C60
Spinal cord layer 4 C6ipsiSCL4C60
Spinal cord layer 1 C6ipsiSCL1C60
Spinal cord layer 2 C6ipsiSCL2C60
Spinal cord layer 3 C7ipsiSCL3C70
Spinal cord layer 4 C7ipsiSCL4C70
Spinal cord layer 1 C7ipsiSCL1C70
Spinal cord layer 2 C7ipsiSCL2C70
Thoracal segment 1ipsiT1-0.5
Spinal cord layers T1ipsiSCLT12
Thoracal segment 2ipsiT22
Spinal cord layers T2ipsiSCLT22
Thoracal segment 3ipsiT32
Spinal cord layers T3ipsiSCLT32
Thoracal segment 4ipsiT42
Spinal cord layers T4ipsiSCLT42
Thoracal segment 8ipsiT82
Thoracal segment 9ipsiT92
Lower thoracic spinal cordipsiTSegLo-0.5
Spinal cord layer 3 T13ipsiSCL3T130
Spinal cord layer 4 T13ipsiSCL4T130
Spinal cord layer 1 T13ipsiSCL1T130
Spinal cord layer 2 T13ipsiSCL2T130
Spinal cord layer 3 L1ipsiSCL3L10
Spinal cord layer 4 L1ipsiSCL4L10
Spinal cord layer 1 L1ipsiSCL1L10
Spinal cord layer 2 L1ipsiSCL2L10
Spinal cord layer 3 L2ipsiSCL3L20
Spinal cord layer 4 L2ipsiSCL4L20
Spinal cord layer 1 L2ipsiSCL1L20
Spinal cord layer 2 L2ipsiSCL2L20
Spinal cord layer 4 L3ipsiSCL4L30
Spinal cord layer 1 L3ipsiSCL1L30
Spinal cord layer 2 L3ipsiSCL2L30
Tracheal parasympathetic preganglionic neuronsipsiTPPN2
Ventrolateral periaqueductal graycontraVLPAG1
Red nucleuscontraR0
Substantia nigra A9contraSN0.5
Ventral tegmental area A10 caudomedial partcontraVTACM0
Interfascicular nucleuscontraIF0.5
Ventral tegmental area A10 medial partcontraVTAM0.5
Locus coeruleuscontraLC0.5
Rostral linear nucleus of the raphecontraRLi0.5
Central raphe nucleuscontraCRN0.5
Tuberomammillary nucleus dorsomedial partcontraTBMdm-0.5
Ventral tuberomammillary nucleuscontraVTM-0.5
Glia limitans ventral to the ventral tuberomammillary nucleuscontraTuMgL-0.5
Dorsomedial hypothalamic nucleuscontraDMHy-0.5
Lateral hypothalamus adjacent to the ventral tuberomammillary nucleuscontraLHVTM-0.5
Anteroventral periventricular nucleus [Anterior hypothalamic area]contraAVPe0
Paraventricular hypothalamic nucleuscontraPa-0.5
Lateral mammillary nucleuscontraLM-0.5
Premammillary nucleus dorsal partcontraPMD-0.5
Premammillary nucleus ventromedial partcontraPMvm-0.5
Supramammillar nucleus lateral partcontraSuML-0.5
A8 dopamine cells retrorubral groupcontraRRF0
A8 dopamine cells retrorubral group medial partcontraRRFm0
Retrochiasmatic areacontraRCh0
Stria medullaris of the thalamuscontrasm0
Fornixcontraf0
Spinal cord layer 3 C4contraSCL3C40
Spinal cord layer 4 C4contraSCL4C40
Spinal cord layer 1 C4contraSCL1C40
Spinal cord layer 2 C4contraSCL2C40
Spinal cord layer 3 C5contraSCL3C51
Spinal cord layer 4 C5contraSCL4C50
Spinal cord layer 1 C5contraSCL1C51
Spinal cord layer 2 C5contraSCL2C51
Spinal cord layer 3 C6contraSCL3C60
Spinal cord layer 4 C6contraSCL4C60
Spinal cord layer 1 C6contraSCL1C60
Spinal cord layer 2 C6contraSCL2C60
Spinal cord layer 3 C7contraSCL3C70
Spinal cord layer 4 C7contraSCL4C70
Spinal cord layer 1 C7contraSCL1C70
Spinal cord layer 2 C7contraSCL2C70
Thoracal segment 2contraT22
Thoracal segment 3contraT32
Thoracal segment 4contraT42
Thoracal segment 8contraT82
Thoracal segment 9contraT92
Spinal cord layer 3 T13contraSCL3T130
Spinal cord layer 4 T13contraSCL4T130
Spinal cord layer 1 T13contraSCL1T130
Spinal cord layer 2 T13contraSCL2T130
Spinal cord layer 3 L1contraSCL3L10
Spinal cord layer 4 L1contraSCL4L10
Spinal cord layer 1 L1contraSCL1L10
Spinal cord layer 2 L1contraSCL2L10
Spinal cord layer 3 L2contraSCL3L20
Spinal cord layer 4 L2contraSCL4L20
Spinal cord layer 1 L2contraSCL1L20
Spinal cord layer 2 L2contraSCL2L20
Spinal cord layer 4 L3contraSCL4L30
Spinal cord layer 1 L3contraSCL1L30
Spinal cord layer 2 L3contraSCL2L30
Adrenal glandipsiADRE-10
Gastrocnemius muscleipsiMuscGC-10
CervixipsiOrgUTC-10
Uterine hornipsiOrgUTh-10
Uterus bodyipsiOrgUTB-10
TestisipsiOrgTest-0.5
Pancreas sideipsiOrgsPancs1

Input from

NameSideAbbr.WeightDetails
Mesencephalic trigeminal nucleusipsiMe5-0.5
Nucleus of the solitary tract intermediate partipsiSolIM-0.5
Raphe nucleiipsiRAN1
Raphe magnus nucleus caudal partipsiRMgc1
Raphe obscurus nucleus rostral partipsiRObr1
Raphe pallidus nucleusipsiRPa1
Rostral ventrolateral medullaipsiRVLM-0.5
Dorsomedial hypothalamic nucleusipsiDMHy0
Perifornical hypothalamic area [Preoptic anterior region]ipsiPFxPAR0.5
Lateral hypothalamic area dorsal partipsiLHd0.5
Lateral hypothalamic area ventral partipsiLHAvp0.5
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM0
Periventricular zoneipsiPVZ0
Medial part of the caudal perifornical areaipsiPeFCM1
Lateral part of the caudal perifornical areaipsiPeFCL0.5
Central amygdaloid nucleus lateral divisionipsiCeL2
Central amygdaloid nucleus medial divisionipsiCeM3
Central amygdaloid nucleus medial division rostral partipsiCeMR2
Dorsomedial hypothalamic nucleuscontraDMHy0
Perifornical hypothalamic area [Preoptic anterior region]contraPFxPAR-0.5
Lateral hypothalamic area dorsal partcontraLHd-0.5
Lateral hypothalamic area ventral partcontraLHAvp-0.5
Dorsomedial hypothalamic nucleus [Medial zone]contraDM0
Periventricular zonecontraPVZ0
Medial part of the caudal perifornical areacontraPeFCM-0.5
Lateral part of the caudal perifornical areacontraPeFCL-0.5
Central amygdaloid nucleus lateral divisioncontraCeL0.5
Central amygdaloid nucleus medial division rostral partcontraCeMR1
Stomach wallipsiOrgsStomWS-0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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