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Rat connectome



Paraventricular hypothalamic nucleus medial parvicellular part [Periventricular zone anterior region] left


Abbreviation
PaMP
Color       
Superior regionsParaventricular hypothalamic nucleus parvicellular part [Periventricular zone anterior region]

SynonymsAbbr.Language
Paraventricular hypothalamic nucleus medial parvicellular part [Periventricular zone anterior region]PaMP 
Paraventricular hypothalamic nucleus medial parvicellular part Eng
Paraventricular hypothalamic nucleus medial parvicellular part [Medial zone anterior region]  
Paraventricular hypothalamic nucleus medial parvicellular part [Periventricular zone anterior region]PaMP 
Middle paraventricular nucleus  

SubregionsSide
Ventral part of the paraventricular hypothalamic nucleus medial parvicellular subdivisionleft
Paraventricular hypothalamic nucleus medial parvicellular part caudal levelleft
Ventrolateral border of the paraventricular hypothalamic nucleus medial parvicellular part [Periventricular zone anterior region]left
Medial part of the paraventricular hypothalamic nucleus medial parvicellular part [Periventricular zone anterior region]left
Anterior part of the paraventricular hypothalamic nucleus medial parvicellular part [Periventricular zone anterior region]left
Caudally in the paraventricular hypothalamic nucleus medial parvicellular part [Periventricular zone anterior region]left

Output to

NameSideAbbr.WeightDetails
Central gray dorsal partipsiCGD2
Central gray medial partipsiCGMe2
Edinger Westphal nucleusipsiEW1
Locus coeruleusipsiLC-0.5
Deep mesencephalic nucleusipsiDpMe-0.5
Pontine reticular nucleusipsiPRN3
Lateral parabrachial nucleusipsiLPB1
Parabrachial nucleus medialipsiPBnMe1
Subcoeruleus nucleusipsiSubC-0.5
Ambiguus nucleusipsiAmb3
Area postremaipsiAP-0.5
Supratrigeminal nucleusipsiSu53
Mesencephalic trigeminal nucleusipsiMe53
Nucleus of the solitary tractipsiSol3
Nucleus of the solitary tract medial partipsiSolM4
Dorsal motor nucleus of vagusipsi104
Dorsal raphe nucleusipsiDR1
Pontine raphe nucleusipsiPnR1
Raphe magnus nucleusipsiRMg-0.5
Raphe obscurus nucleusipsiROb-0.5
Ventral lateral medulla oblongataipsiMVL3
Caudal ventrolateral medullaipsiCVLM-0.5
Rostral ventrolateral medullaipsiRVLM2
Pressor area of the rostral ventrolateral medullaipsiPRVLM-0.5
Caudoventral reticular nucleusipsiCVL-0.5
Lateral superior oliveipsiLSO1
Median eminenceipsiME3
Internal zone of the median eminenceipsiiZME-0.5
Median eminence external layeripsiMEeL-0.5
Median eminence middle portion subependymal layeripsiMEmise-0.5
Medial preoptic areaipsiMPA0.5
Medial preoptic nucleusipsiMPO0.5
Median preoptic nucleusipsiMnPO-0.5
Periventricular area of the preoptic regionipsiPVPREO-0.5
Vascular organ of the lamina terminalisipsiVOLT-0.5
Anterior hypothalamic area central partipsiAHAC1
Dorsomedial hypothalamic areaipsiDMHyA-0.5
Ventromedial hypothalamic nucleusipsiVMH2.5
Anteroventral periventricular nucleus 2ipsiAVPV20.5
Arcuate nucleusipsiArc2
Paraventricular hypothalamic nucleus medial parvicellular part [Periventricular zone anterior region]ipsiPaMP-0.5
Border of the posterior magnocellular and medial parvocellular subdivision at mid-level of the rostrocaudal extentipsiPabPmmp3
Paraventricular hypothalamic nucleus magnocellular division posterior part caudal levelipsiPaMagPC-0.5
Paraventricular hypothalamic nucleus periventricular partipsiPapv-0.5
Periventricular hypothalamic nucleusipsiPe1
Anterior hypothalamic area [Regio rostralis]ipsiAHARR1
Retrochiasmatic areaipsiRCh3
Rhomboid thalamic nucleusipsiRh-0.5
Mediodorsal thalamic nucleusipsiMD-0.5
Paraventricular thalamic nucleusipsiPV-0.5
Paraventricular thalamic nucleus anterior partipsiPVA-0.5
Paraventricular thalamic nucleus posterior partipsiPVP1
Reuniens thalamic nucleusipsiRe-0.5
Reticular thalamic nucleus rostral partipsiRtr-0.5
Lateral habenular nucleusipsiLHb-0.5
Medial habenular nucleusipsiMHb-0.5
Pituitary glandipsiPIT1
Posterior lobe of pituitaryipsiPPit-0.5
Dorsolateral funiculusipsidlft-2
Lateral funiculusipsilf-2
Medial amygdaloid nucleusipsiMe1
Medial amygdaloid nucleus anterodorsal partipsiMeAD0.5
Subthalamic nucleusipsiSTh-0.5
Spinal cord layers C1ipsiSCLC13
Spinal cord layers C2ipsiSCLC23
Spinal cord layers C3ipsiSCLC33
Thoracal segment 1ipsiT13
Central autonomic area of thoracal segment 1ipsiCAAT1-0.5
Intermediolateral cell column T1ipsiIMLT13
Intermediolateral cell column pars funicularis T1ipsiIMLFT1-0.5
Intermediolateral cell column pars principalis T1ipsiIMLPT1-0.5
Intermediolateral cell column pars spinalis T1ipsiIMLST1-0.5
Spinal cord layers T1ipsiSCLT13
Thoracal segment 2ipsiT23
Central autonomic area of thoracal segment 2ipsiCAAT2-0.5
Intermediolateral cell column T2ipsiIMLT23
Intermediolateral cell column pars funicularis T2ipsiIMLFT2-0.5
Intermediolateral cell column pars principalis T2ipsiIMLPT2-0.5
Intermediolateral cell column pars spinalis T2ipsiIMLST2-0.5
Spinal cord layers T2ipsiSCLT23
Thoracal segment 3ipsiT33
Central autonomic area of thoracal segment 3ipsiCAAT3-0.5
Intermediolateral cell column T3ipsiIMLT33
Intermediolateral cell column pars funicularis T3ipsiIMLFT3-0.5
Intermediolateral cell column pars principalis T3ipsiIMLPT3-0.5
Intermediolateral cell column pars spinalis T3ipsiIMLST3-0.5
Spinal cord layers T3ipsiSCLT33
Central autonomic area of thoracal segment 4ipsiCAAT4-0.5
Intermediolateral cell column T4ipsiIMLT43
Intermediolateral cell column pars funicularis T4ipsiIMLFT4-0.5
Intermediolateral cell column pars principalis T4ipsiIMLPT4-0.5
Intermediolateral cell column pars spinalis T4ipsiIMLST4-0.5
Spinal cord layers T4ipsiSCLT43
Intermediolateral cell column T5ipsiIMLT53
Intermediolateral cell column pars funicularis T5ipsiIMLFT5-0.5
Intermediolateral cell column pars principalis T5ipsiIMLPT5-0.5
Intermediolateral cell column pars spinalis T5ipsiIMLST5-0.5
Intermediolateral cell column T6ipsiIMLT63
Intermediolateral cell column pars funicularis T6ipsiIMLFT6-0.5
Intermediolateral cell column pars principalis T6ipsiIMLPT6-0.5
Intermediolateral cell column pars spinalis T6ipsiIMLST6-0.5
Intermediolateral cell column T7ipsiIMLT73
Intermediolateral cell column pars funicularis T7ipsiIMLFT7-0.5
Intermediolateral cell column pars principalis T7ipsiIMLPT7-0.5
Intermediolateral cell column pars spinalis T7ipsiIMLST7-0.5
Intermediolateral cell column T8ipsiIMLT83
Intermediolateral cell column pars funicularis T8ipsiIMLFT8-0.5
Intermediolateral cell column pars principalis T8ipsiIMLPT8-0.5
Intermediolateral cell column pars spinalis T8ipsiIMLST8-0.5
Intermediolateral cell column T9ipsiIMLT94
Intermediolateral cell column pars funicularis T9ipsiIMLFT9-0.5
Intermediolateral cell column pars principalis T9ipsiIMLPT9-0.5
Intermediolateral cell column pars spinalis T9ipsiIMLST9-0.5
Intermediolateral cell column T10ipsiIMLT104
Intermediolateral cell column T11ipsiIMLT114
Thoracal dorsal commissural nucleus T11ipsiLDComT11-0.5
Intermediolateral cell column T12ipsiIMLT124
Thoracal dorsal commissural nucleus T12ipsiLDComT12-0.5
Intermediolateral cell column T13ipsiIMLT134
Thoracal dorsal commissural nucleus T13ipsiLDComT13-0.5
Intermediolateral cell column L1ipsiIMLL11
Lumbar dorsal commissural nucleus L1ipsiLDComL1-0.5
Lumbar dorsal commissural nucleus L2ipsiLDComL2-0.5
Lumbar dorsal commissural nucleus L3ipsiLDComL3-0.5
Lumbar dorsal commissural nucleus L4ipsiLDComL4-0.5
Dorsolateral nucleus lumbal segment 5ipsiDLNL5-0.5
Lumbar dorsal commissural nucleus L5ipsiLDComL5-0.5
Spinal cord layers L5ipsiSCLL5-0.5
Dorsal horn L5ipsiDHL5-0.5
Ventral horn L5ipsiVHL5-0.5
Spinal nucleus of the bulbocavernosus lumbal segment 5ipsiBCL5-0.5
Dorsolateral nucleus lumbal segment 6ipsiDLNL6-0.5
Lumbar dorsal commissural nucleus L6ipsiLDComL6-0.5
Spinal cord layers L6ipsiSCLL6-0.5
Dorsal horn L6ipsiDHL6-0.5
Ventral horn L6ipsiVHL6-0.5
Spinal nucleus of the bulbocavernosus lumbal segment 6ipsiBCL6-0.5
Ventral horn of spinal cordipsiVHMES0.5
Central gray dorsal partcontraCGD2
Central gray medial partcontraCGMe2
Edinger Westphal nucleuscontraEW1
Locus coeruleuscontraLC-0.5
Lateral parabrachial nucleuscontraLPB1
Parabrachial nucleus medialcontraPBnMe1
Ambiguus nucleuscontraAmb1
Nucleus of the solitary tractcontraSol2
Nucleus of the solitary tract medial partcontraSolM3
Ventral lateral medulla oblongatacontraMVL2
Median eminencecontraME3
Medial preoptic nucleuscontraMPO0.5
Median preoptic nucleuscontraMnPO-0.5
Ventromedial hypothalamic nucleuscontraVMH2.5
Anteroventral periventricular nucleus 2contraAVPV20.5
Arcuate nucleuscontraArc2
Paraventricular hypothalamic nucleus dorsal partcontraPaD1
Paraventricular hypothalamic nucleuscontraPa1
Retrochiasmatic areacontraRCh3
Dorsolateral funiculuscontradlft-2
Lateral funiculuscontralf-2
Intermediolateral cell column T1contraIMLT1-0.5
Intermediolateral cell column pars funicularis T1contraIMLFT1-0.5
Intermediolateral cell column pars principalis T1contraIMLPT1-0.5
Intermediolateral cell column pars spinalis T1contraIMLST1-0.5
Intermediolateral cell column T2contraIMLT2-0.5
Intermediolateral cell column pars funicularis T2contraIMLFT2-0.5
Intermediolateral cell column pars principalis T2contraIMLPT2-0.5
Intermediolateral cell column pars spinalis T2contraIMLST2-0.5
Intermediolateral cell column T3contraIMLT3-0.5
Intermediolateral cell column pars funicularis T3contraIMLFT3-0.5
Intermediolateral cell column pars principalis T3contraIMLPT3-0.5
Intermediolateral cell column pars spinalis T3contraIMLST3-0.5
Intermediolateral cell column T4contraIMLT4-0.5
Intermediolateral cell column pars funicularis T4contraIMLFT4-0.5
Intermediolateral cell column pars principalis T4contraIMLPT4-0.5
Intermediolateral cell column pars spinalis T4contraIMLST4-0.5
Intermediolateral cell column T5contraIMLT5-0.5
Intermediolateral cell column pars funicularis T5contraIMLFT5-0.5
Intermediolateral cell column pars principalis T5contraIMLPT5-0.5
Intermediolateral cell column pars spinalis T5contraIMLST5-0.5
Intermediolateral cell column T6contraIMLT6-0.5
Intermediolateral cell column pars funicularis T6contraIMLFT6-0.5
Intermediolateral cell column pars principalis T6contraIMLPT6-0.5
Intermediolateral cell column pars spinalis T6contraIMLST6-0.5
Intermediolateral cell column T7contraIMLT7-0.5
Intermediolateral cell column pars funicularis T7contraIMLFT7-0.5
Intermediolateral cell column pars principalis T7contraIMLPT7-0.5
Intermediolateral cell column pars spinalis T7contraIMLST7-0.5
Intermediolateral cell column T8contraIMLT8-0.5
Intermediolateral cell column pars funicularis T8contraIMLFT8-0.5
Intermediolateral cell column pars principalis T8contraIMLPT8-0.5
Intermediolateral cell column pars spinalis T8contraIMLST8-0.5
Intermediolateral cell column T9contraIMLT9-0.5
Intermediolateral cell column pars funicularis T9contraIMLFT9-0.5
Intermediolateral cell column pars principalis T9contraIMLPT9-0.5
Intermediolateral cell column pars spinalis T9contraIMLST9-0.5
Thoracal dorsal commissural nucleus T11contraLDComT11-0.5
Thoracal dorsal commissural nucleus T12contraLDComT12-0.5
Thoracal dorsal commissural nucleus T13contraLDComT13-0.5
Lumbar dorsal commissural nucleus L1contraLDComL1-0.5
Lumbar dorsal commissural nucleus L2contraLDComL2-0.5
Lumbar dorsal commissural nucleus L3contraLDComL3-0.5
Lumbar dorsal commissural nucleus L4contraLDComL4-0.5
Lumbar dorsal commissural nucleus L5contraLDComL5-0.5
Lumbar dorsal commissural nucleus L6contraLDComL6-0.5

Input from

NameSideAbbr.WeightDetails
Central grayipsiCG1
Periaqueductal grayipsiPAG0
Periventricular gray matteripsiPVG1
Laterodorsal tegmental nucleusipsiLDTg0.5
Locus coeruleusipsiLC3
Locus coeruleus anterior partipsiLCa3
Parabrachial nucleusipsiPB1
Lateral parabrachial nucleus central lateral partipsiLPBCL3
Parabrachial nucleus dorsal partipsiPBD3
Parabrachial nucleus dorsolateral partipsiPBDL3
Lateral reticular nucleusipsiLRt3
Medullary reticular nucleusipsiMdD1
C1 adrenaline cellsipsiC13
Nucleus of the solitary tractipsiSol3
Caudal nucleus of the solitary tract medial partipsiSolcame3
Nucleus of the solitary tract commissural partipsiSolC1
Nucleus of the solitary tract medial partipsiSolM3
Nucleus of the solitary tract medial part caudal zoneipsiSolMc3
Dorsal raphe nucleusipsiDR3
Dorsal raphe nucleus dorsolateral partipsiDRdL3
Median raphe nucleusipsiMnR0.5
Ventral lateral medulla oblongataipsiMVL3
A1 noradrenergic cellsipsiA13
A2 noradrenergic cellsipsiA23
Medullary reticular formation betweeen A1 and A2ipsiMRFbA1A21
Medial septal nucleusipsiMS0
Preoptic regionipsiPREO-0.5
Lateral preoptic areaipsiLPO-0.5
Medial preoptic areaipsiMPA3
Medial preoptic area ventral partipsiMPAV2
Medial preoptic nucleusipsiMPO3
Median preoptic nucleusipsiMnPO-0.5
Median preoptic nucleus anterior ventral aspectipsiMnPOav-0.5
Vascular organ of the lamina terminalisipsiVOLT1
Core of the vascular organ of the lamina terminalisipsiVOLTC0
Dorsomedial hypothalamic nucleusipsiDMHy3
Dorsomedial hypothalamic nucleus non-compact partipsiDMHyncp-0.5
Lateral zoneipsiLHA1
Lateral hypothalamic areaipsiLH3
Lateral hypothalamic area perifornical partipsiPFx3
Anterior perifornical regionipsiPFxa2
Lateral preoptic area 2ipsiLPO21
Anterior hypothalamic areaipsiAHA3
Anterior hypothalamic area anterior partipsiAHAA-0.5
Anterior hypothalamic area caudal partipsiAHAca1
Anterior hypothalamic area immediately caudal to the suprachiasmatic areaipsiAHAcSCh-0.5
Anterior hypothalamic nucleusipsiAHn3
Dorsal hypothalamic area ventral partipsiDAv-0.5
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM3
Dorsomedial hypothalamic nucleus compact partipsiDMC3
Dorsomedial hypothalamic nucleus dorsal partipsiDMD3
Dorsomedial hypothalamic nucleus ventral partipsiDMV3
Dorsomedial hypothalamic nucleus ventromedial partipsiDMVM3
Nucleus circularisipsiNC-0.5
Posterior hypothalamic nucleusipsiPH0.5
Ventral region of posterior hypothalamic nucleusipsiPHv3
Ventromedial hypothalamic nucleusipsiVMH3
Ventromedial hypothalamic nucleus rostrocaudal extentipsiVMHrc2
Arcuate nucleusipsiArc1
Paraventricular nucleus of the hypothalamus magnocellular division anterior magnocellular partipsiPaAMa-0.5
Paraventricular hypothalamic nucleus medial parvicellular part [Periventricular zone anterior region]ipsiPaMP-0.5
Paraventricular hypothalamic nucleus medial parvicellular part caudal levelipsiPaMPC3
Paraventricular hypothalamic nucleus lateral partipsiPaLa-0.5
Paraventricular hypothalamic nucleus magnocellular division posterior partipsiPaMagP-0.5
Paraventricular hypothalamic nucleus dorsal parvocellular divisionipsiPavPoD-0.5
Paraventricular nucleus lateral parvocellular partipsiPaLp1
Paraventricular hypothalamic nucleus periventricular partipsiPapv-0.5
Paraventricular hypothalamic nucleus periventricular part at caudal levelipsiPapvc3
Paraventricular nucleus anterior partipsiPaan2
Periventricular hypothalamic nucleusipsiPe-0.5
Subparaventricular zone of the hypothalamusipsiSPa0
Suprachiasmatic nucleusipsiSCh2
Suprachiasmatic nucleus dorsal divisionipsiSChd3
Suprachiasmatic nucleus lateral divisionipsiSChl0.5
Suprachiasmatic nucleus medial divisionipsiSCnM1.5
Suprachiasmatic nucleus ventrolateral partipsiSCnVL0.5
Supraoptic nucleus [Supraoptic region]ipsiSO2.5
Area around supraoptic nucleusipsiSoRa3
Premammillary nucleus dorsal partipsiPMD3
Premammillary nucleus ventral partipsiPMV3
A11 dopamine cellsipsiA111
Retrochiasmatic area immediately caudal to the suprarchiasmatic areaipsiRChcSCh-0.5
Paraventricular thalamic nucleusipsiPV1
Subfornical organipsiSFO1
Peripheral region of the subfornical organipsiSFOP-0.5
Subfornical organ most anterioripsiSFOmA-0.5
Subfornical organ most ventralipsiSFOmV-0.5
Caudal subfornical organipsiCSFO-0.5
Amygdaloid complexipsiAC0
Anterior basomedial nucleusipsiBMA1
Bed nucleus of the stria terminalisipsiBST3
Bed nucleus of the stria terminalis lateral division ventral partipsiBSTLV1
Bed nucleus of the stria terminalis medial division ventral partipsiBSTMV3
Central amygdaloid nucleusipsiCe1
Medial amygdaloid nucleusipsiMe0.5
Medial amygdaloid nucleus anterior partipsiMeAn1
Medial amygdaloid nucleus anterodorsal partipsiMeAD1.5
Medial amygdaloid nucleus posterior partipsiMePo-0.5
Subiculum ventral partipsiSv3
Septal regionipsiSER-0.5
Lateral septal nucleusipsiLS3
Lateral septal nucleus ventral part rostral partipsiLSVR1
Lateral septal nucleus ventral part caudal partipsiLSVC2.5
Septohypothalamic nucleus rostral partipsiSHyR1
Septohypothalamic nucleus caudal partipsiSHyC2.5
C1 adrenaline cellscontraC1-0.5
Nucleus of the solitary tractcontraSol-0.5
Ventral lateral medulla oblongatacontraMVL-0.5
A1 noradrenergic cellscontraA1-0.5
Dorsomedial hypothalamic nucleuscontraDMHy-0.5
Dorsomedial hypothalamic nucleus compact partcontraDMC1
Dorsomedial hypothalamic nucleus dorsal partcontraDMD1
Dorsomedial hypothalamic nucleus ventral partcontraDMV1
Dorsomedial hypothalamic nucleus ventromedial partcontraDMVM1
Suprachiasmatic nucleuscontraSCh1
Suprachiasmatic nucleus dorsal divisioncontraSChd1
Paraventricular thalamic nucleuscontraPV-0.5
Bed nucleus of the stria terminaliscontraBST0
LungipsiOrgsLung-10
Trachea sideipsiOrgsTras3

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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