University of Rostock

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Rat connectome



Dorsal cortex of the inferior colliculus right


Abbreviation
DCIC
Color       
Superior regionsInferior colliculus dorsal part

SynonymsAbbr.Language
Inferior colliculus dorsal nucleus  
Dorsal nucleus of the inferior colliculusICd 
Dorsal part of inferior colliculus Eng
Dorsal cortex of the inferior colliculusDCICEng
Dorsal cortical nucleus of the inferior colliculus  

SubregionsSide
Dorsal cortex of the inferior colliculus caudal partright
Dorsal cortex of the inferior colliculus deep region medial partright
Dorsal cortex of the inferior colliculus dorsal partright
Dorsal cortex of the inferior colliculus dorsolateral portionright
Dorsal cortex of the inferior colliculus dorsomedial partright
Dorsal cortex of the inferior colliculus dorsoventral partright
Dorsal cortex of the inferior colliculus lateral partright
Dorsal cortex of the inferior colliculus layersright
Dorsal cortex of the inferior colliculus mediobasal partright
Dorsal cortex of the inferior colliculus midlevel partright
Dorsal part of the dorsal cortex of the inferior colliculusright
Dorsocaudal part of the dorsal cortex of the inferior colliculusright
Medial dorsal cortex of the inferior colliculusright
Rostral part of the dorsal cortex of the inferior colliculusright
Ventral part of the dorsal cortex of the inferior colliculusright
Ventrolateral part of the dorsal cortex of the inferior colliculusright
Ventromedial part of the dorsal cortex of the inferior colliculusright
Dorsal cortex of the inferior colliculus central zoneright
Dorsal cortex of the inferior colliculus central nucleusright
Dorsal cortex of the inferior colliculus dorsocentral zoneright

Output to

NameSideAbbr.WeightDetails
Inferior colliculuscontraICOL3
Central nucleus of the inferior colliculuscontraCIC3
Central nucleus of the inferior colliculus dorsal partcontraCICD3
Deepest part of the ventral central nucleus of the inferior colliculuscontraCICVd3
Dorsal cortex of the inferior colliculuscontraDCIC3
Dorsal cortex of the inferior colliculus layer 3contraDCICL33
Dorsal cortex of the inferior colliculus layer 2contraDCICL23
Dorsocaudal region near the dorsal cortex and lateral cortex bordercontraICOLDLdc1
Inferior colliculus rostral partcontraICOLR0.5
Tectal longitudinal columncontraTCL1
Caudal tectal longitudinal columncontraCTCL2
Rostral tectal longitudinal columncontraRTCL1
ThalamuscontraT-1
Subparafascicular thalamic nucleuscontraSPF0.5
Subparafascicular thalamic nucleus caudal partcontraSPFc0.5
Subparafascicular thalamic nucleus medial partcontraSPFme0.5
Subparafascicular thalamic nucleus rostral partcontraSPFr0.5
Marginal zone of medial geniculate nucleuscontraMMG1
Medial geniculate nucleus dorsal partcontraMGD1
Core nuclei of the lateral lemniscusipsiCNLL0
Sagulum nucleusipsiSag3
Medial paralemniscal nucleusipsiMPL2
Inferior colliculusipsiICOL3
Central nucleus of the inferior colliculusipsiCIC-0.5
Commissure of the inferior nucleusipsicic-2
External cortex of the inferior colliculusipsiECIC-0.5
Dorsal cortex of the inferior colliculus layer 3ipsiDCICL33
Dorsal cortex of the inferior colliculus layer 2ipsiDCICL23
Superior colliculusipsiSC2
Tectal longitudinal columnipsiTCL1
Caudal tectal longitudinal columnipsiCTCL3
Rostral tectal longitudinal columnipsiRTCL2
Substantia nigra lateral partipsiSNL-1
Ventrolateral tegmental areaipsiVLTg-0.5
Ventral nucleus of the trapezoid bodyipsiVNTB1
CochleaipsiCO-0.5
Dorsal cochlear nucleusipsiDC1
Ventral cochlear nucleusipsiVC1
Rostral periolivary regionipsiRPO1
Medial superior oliveipsiMSO0
Caudal superior olivary complexipsiSuOLiC0
Superior paraolivary nucleusipsiSPO0
Suprageniculate thalamic nucleusipsiSG1
Posterior intralaminar thalamic nucleusipsiPIL-1
Subparafascicular thalamic nucleusipsiSPF1.5
Subparafascicular thalamic nucleus caudal partipsiSPFc2
Subparafascicular thalamic nucleus medial partipsiSPFme2
Subparafascicular thalamic nucleus rostral partipsiSPFr1
Zona incerta lateral partipsiZIL1
Temporoparietal cortexipsiTPcx-1
Marginal zone of the medial geniculateipsiMZMG-1
Medial geniculate nucleusipsiMG1.5
Lateromedial part of medial geniculate nucleus dorsal partipsiMGDLM2
Medial geniculate nucleus dorsal part medial subdivisionipsiMGDm1
Rostrocaudal part of medial geniculate nucleus dorsal partipsiMGDRC2
Medial geniculate nucleus medial partipsiMGM1
Medial geniculate nucleus ventral partipsiMGV-1
Dorsal part of medial geniculate nucleus ventral partipsiMGVD3
Lateromedial part of medial geniculate nucleus ventral partipsiMGVLM2
Medial geniculate nucleus ventral part medial partipsiMGVm1
Rostrocaudal part of medial geniculate nucleus ventral partipsiMGVRC2

Input from

NameSideAbbr.WeightDetails
Dorsal nucleus of the lateral lemniscuscontraDLL2
Inferior colliculuscontraICOL-0.5
Central nucleus of the inferior colliculuscontraCIC1
Central nucleus of the inferior colliculus dorsal partcontraCICD3
Dorsal most part of the central nucleus of the inferior colliculuscontraCICDdm3
Ventromedial part of the central nucleus of the inferior colliculuscontraCICVM1
Commissure of the inferior nucleuscontracic-0.5
External cortex of the inferior colliculuscontraECIC3
Dorsal cortex of the inferior colliculuscontraDCIC3
Inferior colliculus lateral partcontraICOLL3
Dorsolateral corner of the inferior colliculus lateral partcontraICOLLdL0.5
Locus coeruleuscontraLC-0.5
Medial trapezoid nucleuscontraMTz0
Anteroventral cochlear nucleuscontraAVCON1
Rostral part of the anteroventral cochlear nucleuscontraAVCONrp1
Region 1 of the anteroventral cochlear nucleuscontraAVCONr11
Basal third of the anteroventral cochlear nucleuscontraAVCONbt3
Dorsolateral part of the anteroventral cochlear nucleuscontraDLAVCON1
Octupus cells of the anteroventral cochlear nucleuscontraocAVCON0
Dorsal cochlear nucleuscontraDC0.5
Basal third of the dorsal cochlear nucleuscontraBtDC3
Basolateal part of the dorsal cochlear nucleuscontraBLDC3
Posteroventral cochlear nucleuscontraPVCON1
Octopus cells of the posterior ventral cochlear nucleuscontraPVCONoc0
Dorsolateral part of the posteroventral cochlear nucleuscontraDLPVCON1
Basal third of the posteroventral cochlear nucleuscontraBtPVCON3
Region 1 of the posteroventral cochlear nucleuscontraPVCONr11
Rostral part of the posteroventral cochlear nucleuscontraRPVCON1
Superior olivecontraSuOLi0.5
Lateral superior olivecontraLSO1.5
Superior paraolivary nucleus dorsomedial partcontraSPODM1
Caudal globus palliduscontraGPc-3
Caudal one-third of temporal association cortex 1 deep layerscontraTecaotdL2
Deep gray matter of the temporal association cortex 1contraTeAdL2
Rostral half of temporal association cortex 1 deep layerscontraTeArhdL1
Temporal association cortex 1 rostral half deep layerscontraTeArohdL1
Temporal association cortex 1 rostral two thirds deep layerscontraTeArttdL1
Primary auditory cortexcontraAu12
Rostral half of the secondary auditory cortexcontraAu2R1.5
Caudal half of the secondary auditory cortexcontraAu2CH1.5
Secondary auditory cortex dorsal areacontraAuD0.5
Secondary somatosensory cortexcontraS20.5
Dorsal nucleus of the lateral lemniscusipsiDLL1.5
Intermediate nucleus of the lateral lemniscusipsiILL1.5
Ventral nucleus of the lateral lemniscusipsiVLL1.5
Central nucleus of the inferior colliculusipsiCIC-0.5
Ventromedial part of the central nucleus of the inferior colliculusipsiCICVM2.5
External cortex of the inferior colliculusipsiECIC3
External cortex of the inferior colliculus rostral partipsiECICr3
Inferior colliculus lateral partipsiICOLL3
Inferior colliculus lateral part layersipsiICOLLa-0.5
Intercollicular nucleusipsiInCo1
Most caudal part of the superior colliculusipsimcSC3
Locus coeruleusipsiLC-0.5
Nucleus incertus pars compactaipsiNIc1
Medial trapezoid nucleusipsiMTz0
MyelencephalonipsiMYC-0.5
Cochlear nucleusipsiCON-0.5
Dorsal cochlear nucleusipsiDC1
Ventral cochlear nucleusipsiVC1
Superior oliveipsiSuOLi1
Lateral superior oliveipsiLSO3
Medial superior oliveipsiMSO-0.5
Superior paraolivary complex lateral partipsiSOCl3
Lateral hypothalamic areaipsiLH2
Lateral hypothalamic area perifornical partipsiPFx2
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM2
Dorsomedial hypothalamic nucleus dorsomedial partipsiDMDM2
Posterior hypothalamic areaipsiPHA2
Suprageniculate thalamic nucleusipsiSG-1
Posterior intralaminar thalamic nucleusipsiPIL3
Lateral lemniscusipsill-0.5
Dorsal part of the dorsal lateral lemniscusipsiddll2
Caudal globus pallidusipsiGPc-3
Temporal association area 2 dorsal partipsiTe2D0
Boundary between layer 5 and 6 of temporal area 2ipsiTe2L5b61
Temporal association area 2 layer 1ipsiTe2L10
Temporal association area 2 layer 2ipsiTe2L20
Temporal association area 2 layer 3ipsiTe2L30
Temporal association area 2 layer 4ipsiTe2L40
Temporal association area 2 layer 5ipsiTe2L53
Temporal association area 2 layer 5aipsiTe2L5a3
Temporal association area 2 layer 5bipsiTe2L5b1
Boundary between layer 5 and of temporal area 3ipsiTe3L5b61
Temporal association area 3 layer 5ipsiTe3L53
Temporal association area 3 layer 5aipsiTe3L5a3
Temporal association area 3 layer 5bipsiTe3L5b1
Temporal association area 3 layer 1ipsiTe3L10
Temporal association area 3 layer 2ipsiTe3L20
Temporal association area 3 layer 3ipsiTe3L30
Temporal association area 3 layer 4ipsiTe3L40
Caudal one-third of temporal association cortex 1 deep layersipsiTecaotdL3
Temporal association cortex 1 layer 3ipsiTeAL30
Temporal association cortex 1 layer 4ipsiTeAL40
Deep gray matter of the temporal association cortex 1ipsiTeAdL3
Temporal association cortex 1 layer 5ipsiTeAL53
Temporal association cortex 1 layer 5aipsiTeAL5a1
Temporal association cortex 1 layer 5bipsiTeAL5b3
Boundary between layer 5 and 6 of temporal areaipsiTeAL5b61
Temporal association cortex 1 layer 1ipsiTeAL10
Temporal association cortex 1 layer 2ipsiTeAL20
Rostral half of temporal association cortex 1 deep layersipsiTeArhdL1.5
Temporal association cortex 1 rostral half deep layersipsiTeArohdL1.5
Temporal association cortex 1 rostral two thirds deep layersipsiTeArttdL1.5
Ventral temporal association cortexipsiTev1
Auditory regionsipsiAU-0.5
Primary auditory cortexipsiAu13
Center of the primary auditory cortexipsiAu1Ce-0.5
Dorsal primary auditory cortexipsiAu1D2
Medial part of the primary auditory cortexipsiAu1M2
Primary auditory cortex anteroventral partipsiAu1av-0.5
Primary auditory cortex caudoventral partipsiAu1cv-0.5
Rostral half of the secondary auditory cortexipsiAu2R3
Caudal half of the secondary auditory cortexipsiAu2CH3
Secondary auditory cortex dorsal areaipsiAuD1
Secondary somatosensory cortexipsiS21
Medial geniculate nucleus dorsal partipsiMGD-1
Medial geniculate nucleus dorsal part medial subdivisionipsiMGDm-1
Medial geniculate nucleus medial partipsiMGM3

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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