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Rat connectome



Dorsal cochlear nucleus left


Abbreviation
DC
Color       
Superior regionsCochlear nucleus

SynonymsAbbr.Language
 DCO 
 DCoN 
 DCN 
Nucleus cochlearis posterior Lat
Dorsal cochlear nucleusDCEng

SubregionsSide
Caudal two-thirds of the dorsal cochlear nucleusleft
Dorsal cochlear nucleus deep coreleft
Dorsal cochlear nucleus deep layerleft
Dorsal cochlear nucleus ectopic Purkinje cellsleft
Dorsal cochlear nucleus fusiform layerleft
Dorsal cochlear nucleus superficial layerleft
Dorsal part of the dorsal cochlear nucleusleft
Intermediate dorsal cochlear nucleusleft
Lateral aspect of the dorsal cochlear nucleusleft
Medial part of the dorsal cochlear nucleusleft
Rostral part of the dorsal cochlear nucleusleft
Ventral part of the dorsal cochlear nucleusleft
Basal part of the dorsal cochlear nucleusleft
Basolateal part of the dorsal cochlear nucleusleft
Dorsomedial part of the dorsal cochlear nucleusleft
Dorsal cochlear nucleus cartwheel cellleft
Dorsal cochlear nucleus pyramidal neuronleft
Dorsal cochlear nucleus octopus cellleft
Dorsal cochlear nucleus ventrolateral partleft
Dorsal cochlear nucleus multipolar cellsleft

Output to

NameSideAbbr.WeightDetails
Nuclei of the lateral lemniscusipsiNLL2
Intermediate nucleus of the lateral lemniscusipsiILL1
Inferior colliculusipsiICOL2
Central nucleus of the inferior colliculusipsiCIC3
Center of the central nucleus of the inferior colliculusipsiCICC1
Central nucleus of the inferior colliculus dorsal partipsiCICD0.5
Central nucleus of the inferior colliculus ventral partipsiCICV0.5
External cortex of the inferior colliculusipsiECIC3
External cortex of the inferior colliculus deep layersipsiECICdL3
Dorsal cortex of the inferior colliculusipsiDCIC1
Inferior colliculus lateral part layer 3ipsiICOLL33
Inferior colliculus medial partipsiICOLm3
Central tegmental field dorsal partipsiTGACd0
Laterodorsal tegmental nucleusipsiLDTg0.5
Dorsal tegmental nucleusipsiDTg0.5
Pedunculopontine tegmental nucleusipsiPPTg0
CerebellumipsiCERE-0.5
A7 noradrenaline cellsipsiA7-0.5
Locus coeruleusipsiLC1
Pontine nucleiipsiPn2
Reticular systemipsiRF-0.5
Pontine reticular nucleus caudal partipsiPNC3
Parvicellular reticular nucleusipsiPCRt0
Lateral nucleus of the trapezoid bodyipsiLNTB-0.5
Ventral nucleus of the trapezoid bodyipsiVNTB-0.5
Anteroventral cochlear nucleusipsiAVCON3
Granule cell lamina border between ventral and dorsal cochlear nucleusipsigcbbvdCON1
Dorsal cochlear nucleusipsiDC3
Ventral cochlear nucleusipsiVC-0.5
Vestibular ductsipsivd1
Dorsal acoustic striaipsidas-2
Dorsal column nucleiipsiDCN1
Cuneate nucleusipsiCu1
Inferior oliveipsiIO-0.5
Superior oliveipsiSuOLi-0.5
Lateral superior oliveipsiLSO-0.5
Border region of the lateral superior oliveipsiBLSO-0.5
Medial superior oliveipsiMSO1
Caudal superior olivary complexipsiSuOLiC1
Superior paraolivary nucleusipsiSPO-0.5
Lateral paragigantocellular nucleusipsiLPGi1
Supraoptic nucleus [Supraoptic region]ipsiSO2.5
Zona incerta lateral partipsiZIL2
Medial geniculate nucleus medial partipsiMGM2
Periventricular zone at 4th ventricleipsiPVZ4V-0.5
Nuclei of the lateral lemniscuscontraNLL2
Dorsal nucleus of the lateral lemniscuscontraDLL0.5
Intermediate nucleus of the lateral lemniscuscontraILL-0.5
Inferior colliculuscontraICOL3
Caudal part of inferior colliculuscontraICOLC1
Central nucleus of the inferior colliculuscontraCIC3
Center of the central nucleus of the inferior colliculuscontraCICC3
Central nucleus of the inferior colliculus dorsal partcontraCICD3
Central nucleus of the inferior colliculus ventral partcontraCICV3
External cortex of the inferior colliculuscontraECIC2
External cortex of the inferior colliculus layer 3contraECICL33
Dorsal cortex of the inferior colliculuscontraDCIC0.5
Central tegmental field dorsal partcontraTGACd0
Ventrolateral tegmental areacontraVLTg3
Laterodorsal tegmental nucleuscontraLDTg0.5
Dorsal tegmental nucleuscontraDTg0.5
Pedunculopontine tegmental nucleuscontraPPTg0
Subcollicular tegmentumcontraTGAs-0.5
A7 noradrenaline cellscontraA73
Locus coeruleuscontraLC0.5
Pontine nucleicontraPn0
Reticular systemcontraRF-2
Pontine reticular nucleus caudal partcontraPNC3
Parvicellular reticular nucleuscontraPCRt0
Ventral nucleus of the trapezoid bodycontraVNTB-0.5
Dorsal part of the trapezoid bodycontratzd1
Cochlear nucleuscontraCON0.5
Dorsal cochlear nucleuscontraDC1
Posteroventral cochlear nucleuscontraPVCON-0.5
Ventral cochlear nucleuscontraVC1
Inferior olivecontraIO-0.5
Superior olivecontraSuOLi-0.5
Border region of the lateral superior olivecontraBLSO-0.5
Medial superior olivecontraMSO1
Caudal superior olivary complexcontraSuOLiC1
Superior paraolivary nucleuscontraSPO-0.5
Zona incerta lateral partcontraZIL2
Medial globus pallidus dorsal part medial partcontraMGPdm1
Medial geniculate nucleus medial partcontraMGM2
Medial geniculate nucleus ventral partcontraMGV0
Orbicularis oculi muscleipsiMuscOrbOc-0.5
Musculus tensor tympaniipsiMuscTeTy1
Orbicularis oculi musclecontraMuscOrbOc-0.5
Musculus tensor tympanicontraMuscTeTy2

Input from

NameSideAbbr.WeightDetails
Brain stemipsiBS1
Ventral nucleus of the lateral lemniscusipsiVLL-0.5
Periaqueductal grayipsiPAG-0.5
Inferior colliculusipsiICOL-0.5
Central nucleus of the inferior colliculusipsiCIC3
Commissure of the inferior nucleusipsicic-2
External cortex of the inferior colliculusipsiECIC3
External cortex of the inferior colliculus layer 3ipsiECICL33
Inferior colliculus dorsal partipsiICOLD0
Dorsal cortex of the inferior colliculusipsiDCIC1
Inferior colliculus medial partipsiICOLm-0.5
Lateral tegmental nucleusipsiLTN1
Laterodorsal tegmental nucleusipsiLDTg-0.5
Ventral tegmental nucleusipsiVTg-0.5
Edinger Westphal nucleusipsiEW3
Inferior cerebellar peduncleipsiicp-2
PonsipsiP0
Locus coeruleusipsiLC3
Pontine nuclei dorsal partipsiDBPn0
Gigantocellular reticular nucleusipsiGi1
Gigantocellular reticular nucleus ventral partipsiGiV1
Parvicellular reticular nucleusipsiPCRt1
Trapezoid bodyipsitz-0.5
Nucleus of the trapezoid bodyipsiTz-0.5
Ventral nucleus of the trapezoid bodyipsiVNTB2
Hypoglossal nucleusipsi12S1
Perihypoglossal complexipsi12periC1
Trigeminal nucleusipsi5-0.5
Dorsalmost part of the spinal trigeminal tractipsisp5dm1.5
CochleaipsiCO1
Anteroventral cochlear nucleusipsiAVCON3
Caudal part of the anterior ventral cochlear nucleusipsiCAVCON1.5
Dorsal cochlear nucleusipsiDC3
Posteroventral cochlear nucleusipsiPVCON0.5
Ventral cochlear nucleusipsiVC3
Ventral cochlear nucleus anterior part magnocellular core marginal cellsipsiAVCNmcmc1
Ventral cochlear nucleus anterior part magnocellular core planar cellsipsiAVCNmcpc2
Ventral cochlear nucleus anterior part magnocellular core radiate cellsipsiAVCNmcrc1
Ventral cochlear nucleus posterior partipsiVCP3
Ventral cochlear nucleus posterior part magnocellular core marginal cellsipsiPVCNmcmc1
Ventral cochlear nucleus posterior part magnocellular core planar cellsipsiPVCNmcpc2
Ventral cochlear nucleus posterior part magnocellular core radiate cellsipsiPVCNmcrc1
Medial vestibular nucleusipsiMVe3
Lateral vestibular nucleusipsiLVe1.5
Dorsal raphe nucleusipsiDR-0.5
Median raphe nucleusipsiMnR0
Pontine raphe nucleusipsiPnR-0.5
Raphe magnus nucleusipsiRMg2
Raphe obscurus nucleusipsiROb2
Raphe pallidus nucleusipsiRPa1
Ventral lateral medulla oblongataipsiMVL-0.5
A1 noradrenalin cells C1 adrenaline cellsipsiA1/C1-0.5
A1 noradrenergic cellsipsiA1-0.5
Dorsal column nucleiipsiDCN1
Cuneate nucleusipsiCu-0.5
Cuneate nucleus dorsal partipsiCuD3
Cuneate nucleus rostral partipsiCuRo-0.5
GracileipsiGra-0.5
Medial oliveipsiMON-0.5
Dorsal periolivary regionipsiDPO-0.5
Medioventral periolivary nucleusipsiMVPO-0.5
Lateral superior oliveipsiLSO3
Lateral paragigantocellular nucleusipsiLPGi1
Medial preoptic areaipsiMPA-0.5
Lateral hypothalamic areaipsiLH4
Lateral hypothalamic area perifornical partipsiPFx4
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM4
Dorsomedial hypothalamic nucleus dorsomedial partipsiDMDM4
Posterior hypothalamic areaipsiPHA4
Posterior hypothalamic nucleus caudal partipsiPHCa0
Posterior hypothalamic nucleus rostral partipsiPHRo0
Paraventricular hypothalamic nucleus parvocellular divisionipsiPavPo-0.5
Subparafascicular thalamic nucleus magnocellular partipsiSPFm1
Subparafascicular thalamic nucleus parvicellular partipsiSPFp1
Zona incerta lateral partipsiZIL2
Medial habenular nucleusipsiMHb3
Medial lemniscusipsiml1
Bed nucleus of the stria terminalisipsiBST-0.5
Piriform cortexipsiPir-0.5
Temporal association cortex 1ipsiTeA1
Medial geniculate nucleus medial partipsiMGM2
Septofimbrial nucleusipsiSFi-0.5
Pyramidal tractipsipy1
Ventral nucleus of the lateral lemniscuscontraVLL-0.5
Periaqueductal graycontraPAG-0.5
Central nucleus of the inferior colliculuscontraCIC3
External cortex of the inferior colliculuscontraECIC1
External cortex of the inferior colliculus layer 3contraECICL33
Inferior colliculus dorsal partcontraICOLD0
Locus coeruleuscontraLC2
Parvicellular reticular nucleuscontraPCRt-0.5
Ventral nucleus of the trapezoid bodycontraVNTB3
Most dorsal part of the ventral nucleus of the trapezoid bodycontramDVNTB1
Dorsoventral part of the ventral nucleus of the trapezoid bodycontraVNTBdv-0.5
Cochlear nucleuscontraCON-0.5
Dorsal cochlear nucleuscontraDC1
Ventral cochlear nucleuscontraVC1
Superior vestibular nucleuscontraSuVe-0.5
A1 noradrenalin cells C1 adrenaline cellscontraA1/C1-0.5
A1 noradrenergic cellscontraA1-0.5
Caudal periolivary nucleuscontraCPO-0.5
Dorsal periolivary regioncontraDPO-0.5
Lateroventral periolivary nucleuscontraLVPO-0.5
Medioventral periolivary nucleuscontraMVPO3
Medial part of the medioventral periolivary nucleuscontraMVPOm2
Rostral periolivary regioncontraRPO3
Lateral paragigantocellular nucleuscontraLPGi1
Medial preoptic areacontraMPA-0.5
Dorsomedial hypothalamic nucleuscontraDMHy-0.5
Lateral hypothalamic nucleuscontraLHN-0.5
Posterior hypothalamic nucleuscontraPH-0.5
Posterior hypothalamic nucleus caudal partcontraPHCa0
Posterior hypothalamic nucleus rostral partcontraPHRo0
Arcuate nucleuscontraArc-0.5
Paraventricular hypothalamic nucleus parvocellular divisioncontraPavPo-0.5
Premammillary nucleus ventral partcontraPMV-0.5
Subparafascicular thalamic nucleus magnocellular partcontraSPFm0.5
Subparafascicular thalamic nucleus parvicellular partcontraSPFp0.5
Medial habenular nucleuscontraMHb3
Bed nucleus of the stria terminaliscontraBST-0.5
Piriform cortexcontraPir-0.5
Primary auditory cortexcontraAu1-0.5
Septofimbrial nucleuscontraSFi-0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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