University of Rostock

Department of Anatomy

Neuroscience Group

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Rat connectome



Mediobasal hypothalamus right


Abbreviation
MeHypo
Color       
Superior regionsHypothalamic zones

SynonymsAbbr.Language
Mediobasal hypothalamusMeHypoEng

SubregionsSide
Medial division of the hypothalamusright
Medial zoneright
Mediobasal hypothalamus anterior partright
Mediobasal hypothalamus posterior partright
Periventricular zoneright
Transition area between lateral hypothalamus and mediobasal hypothalamusright
Ventral hypothalamic regionright

Output to

NameSideAbbr.WeightDetails
Ventrolateral periaqueductal grayipsiVLPAG3
Substantia nigra compact partipsiSNC0
Substantia nigra reticular partipsiSNR0
Ventral tegmental area A10ipsiVTA0
Middle part of the retrorubral fieldipsiRRmi0
Caudoventrolateral reticular nucleusipsiCVLR-0.5
Ventromedial hypothalamic nucleusipsiVMH-0.5
A8 dopamine cells retrorubral group lateral partipsiRRFL0
A8 dopamine cells retrorubral group medial partipsiRRFm0
Retrochiasmatic areaipsiRCh1
Optic chiasmipsiox0
HippocampusipsiHIPP-0.5
Lateral septal nucleusipsiLS-1

Input from

NameSideAbbr.WeightDetails
Dorsal raphe nucleus lateral wingcontraDRlw-0.5
B9 serotonin cellscontraB9-0.5
Caudal linear nucleus of the raphe posterior regionipsiCLiP-0.5
Rostral midbrainipsiMECRo1
Parabrachial nucleusipsiPB4
Dorsal raphe nucleus lateral wingipsiDRlw-0.5
Median raphe nucleusipsiMnR-0.5
Pontine raphe nucleusipsiPnR-0.5
Raphe pallidus nucleusipsiRPa1
B9 serotonin cellsipsiB9-0.5
B6 subnucleusipsiB6-0.5
B7 cell groupipsiB7CG-0.5
Raphe nuclei rostro-caudal extentipsiRANrce-0.5
Diagonal band of BrocaipsiDBB1
Medial septal nucleusipsiMS0.5
Medial preoptic areaipsiMPA3
Medial preoptic nucleusipsiMPO2
Ventral preoptic areaipsiPREOV-0.5
Lateral hypothalamic areaipsiLH1
Anterior hypothalamic areaipsiAHA2.5
Anteroventral periventricular nucleus [Anterior hypothalamic area]ipsiAVPe-0.5
Paraventricular hypothalamic nucleusipsiPa0.5
Suprachiasmatic nucleusipsiSCh1
Bed nucleus of the stria terminalisipsiBST1
Bed nucleus of the stria terminalis medial divisionipsiBSTM0
Medial amygdaloid nucleusipsiMe2
Amygdalohippocampal areaipsiAHi2.5
Subiculum ventral partipsiSv2
Interpeduncular nucleus apical subnucleusipsiIPA-0.5
Lateral septal nucleusipsiLS2

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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