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Rat connectome



Lateral septal nucleus right


Abbreviation
LS
Color       
Superior regionsSeptal region

SynonymsAbbr.Language
Lateral septal area  
Lateral septum  
Lateral septal nucleusLSEng
Nucleus lateralis septi Eng
Lateral septal region Eng
Septal nucleus  
Lateral sepatal complex Eng

SubregionsSide
Lateral septal nucleus caudal partright
Lateral septal nucleus central positionright
Lateral septal nucleus dorsal partright
Lateral septal nucleus dorsolateral partright
Lateral septal nucleus dorsolateral quadrantright
Lateral septal nucleus dorsomedial quadrantright
Lateral septal nucleus intermediate partright
Lateral septal nucleus medial partright
Lateral septal nucleus posterior partright
Lateral septal nucleus rostral partright
Lateral septal nucleus rostrocaudal partright
Lateral septal nucleus ventral and medial quadrantright
Lateral septal nucleus ventral partright
Lateral septal nucleus ventrolateral partright
Lateral septal nucleus ventrolateral quadrantright
Mediodorsal aspect of the lateral septal nucleusright
Lateral septal nucleus lateral partright
Lateral septal nucleus intermediolateral partright
Lateral septal nucleus anterior partright
Lateral septal nucleus basal partsright
Marginal zone of the lateral septal nucleusright
Mid-lateral septumright
Lateral septal nucleus mediolateral partright
Areas just ventral to the lateral septal nucleus dorsal partright
Lateral septal nucleus enkephaline regionright
Anteroposterior extension of the lateral septal nucleusright
Ventroposterior extension of the lateral septal nucleusright
Lateral septal nucleus rostrodorsal partright
Lateral septal nucleus rostroventral partright
Lateral septal nucleus caudolateral partright
Lateral septal nucleus medial halfright

Output to

NameSideAbbr.WeightDetails
Medial longitudinal fasciculuscontramlf1
Nuclei of the lateral lemniscuscontraNLL0
Periaqueductal graycontraPAG0
Lateral periaqueductal graycontraLPAG0
Periaqueductal gray medial partcontraPAGm0
Central tegmental field dorsal partcontraTGACd0
Medial tegmental fieldcontraMTF1
Ventral tegmental area A10contraVTA1
Laterodorsal tegmental nucleuscontraLDTg0.5
Ventral tegmental nucleuscontraVTg0.5
Dorsal tegmental nucleuscontraDTg0.5
Dorsal tegmental nucleus ventromedial partcontraDTgVM3
Central gray matter surrounding the dorsal tegmental nucleus of GuddencontraTGAGcgm1
Pedunculopontine tegmental nucleuscontraPPTg0
Dorsolateral edge of the superior cerebellar pedunclecontrasucepdL1
Locus coeruleuscontraLC0.5
Nucleus incertuscontraNI-0.5
Koelliker Fuse nucleus dorsal partcontraKFD1
Parabrachial nucleus medialcontraPBnMe1
Subcoeruleus nucleuscontraSubC1
Dorsal raphe nucleus pontine partcontraDRPo1
Angular part of the ventral diagonal bandcontraVDBVA1
Ventrolateral part of the ventral diagonal bandcontraVDBVVL1
Nucleus of the horizontal limb of the diagonal band medial partcontraHDBm1
Medial septal nucleuscontraMS0
Medial septal nucleus lateral partcontraMSLa0.5
Lateral preoptic area medial partcontraLPOm0.5
Medial preoptic areacontraMPA0.5
Medial preoptic nucleuscontraMPO-0.5
Ventrolateral preoptic nucleuscontraVLPO-0.5
Ventromedial preoptic nucleuscontraVMPO-0.5
Dorsomedial hypothalamic nucleuscontraDMHy0.5
Dorsomedial hypothalamic nucleus non-compact partcontraDMHyncp-0.5
Lateral hypothalamic area medial part [Preoptic anterior region]contraLHAmpar0.5
Lateral zonecontraLHA-0.5
Lateral hypothalamic areacontraLH2
Tuberal magnocellular nucleuscontraTUmag-0.5
Anterior hypothalamic areacontraAHA0.5
Dorsomedial hypothalamic nucleus [Medial zone]contraDM-0.5
Parastriatal nucleuscontraPS-1
Posterior hypothalamic areacontraPHA0.5
Ventromedial hypothalamic nucleuscontraVMH0.5
Dorsomedial paraventricular hypothalamic nucleuscontraPaDM0.5
Paraventricular hypothalamic nucleus anterior parvicellular part [Periventricular zone anterior region]contraPaAP0.5
Paraventricular hypothalamic nucleuscontraPa0.5
Paraventricular nucleus medial partcontraPame2
Supraoptic nucleus [Supraoptic region]contraSO3
Perinuclear zone dorsal to the supraoptic regioncontraSoRpnzd3
Ventrolateral thalamic nucleuscontraVL0.5
Ventromedial thalamic nucleuscontraVM0.5
Lateral habenular nucleus medial partcontraLHbM3
Bed nucleus of the stria terminaliscontraBST0.5
Bed nucleus of the stria terminalis anterior divisioncontraBSTA0
Infralimbic cortexcontraIL1
Precommissural nucleuscontraPrC1
Lateral septal nucleuscontraLS0
Top of 3d ventriclecontraT3V0.5
Cervical segment 7contraCS7-1
Central grayipsiCG1
Central gray medial partipsiCGMe1
Central gray mesencephalic part lateral borderipsiCGMLb-0.5
Anteroposterior extension of the central gray mesencephalic partipsiCGMap3
Between anterior end of dorsal raphe and posterior ventral tegmental nucleus of the central gray mesencephalic partipsiCGMdrvtg3
Medial longitudinal fasciculusipsimlf1
Nuclei of the lateral lemniscusipsiNLL0
Periaqueductal grayipsiPAG1
Lateral periaqueductal grayipsiLPAG1
Periaqueductal gray medial partipsiPAGm1
Periaqueductal gray rostral partipsiPAGR3
Ventrolateral periaqueductal grayipsiVLPAG1
Central tegmental field dorsal partipsiTGACd0
Medial tegmental fieldipsiMTF-0.5
Rostromedial tegmental nucleusipsiRMTg2
Substantia nigra compact partipsiSNC1
Substantia nigra reticular partipsiSNR0
Ventral tegmental area A10ipsiVTA3
Ventral tegmental area A10 caudal partipsiVTAcp2
Ventral tegmental area A10 rostroventral partipsiVTArov-0.5
Ventral tegmental area rostral partipsiVTAR2
Ventral tegmental area anterior partipsiVTAA-0.5
Paranigral nucleusipsiPN2
Middle part of the retrorubral fieldipsiRRmi0
Adjacent parts of the ventral tegmental areaipsiVeMTap1
Laterodorsal tegmental nucleusipsiLDTg1
Ventral tegmental nucleusipsiVTg1
Dorsal tegmental nucleusipsiDTg1
Dorsal tegmental nucleus ventromedial partipsiDTgVM3
Central gray matter surrounding the dorsal tegmental nucleus of GuddenipsiTGAGcgm3
Pedunculopontine tegmental nucleusipsiPPTg0
Dorsolateral edge of the superior cerebellar peduncleipsisucepdL-0.5
Locus coeruleusipsiLC1
Nucleus incertusipsiNI1
Koelliker Fuse nucleus dorsal partipsiKFD1
Parabrachial nucleus medialipsiPBnMe3
Subcoeruleus nucleusipsiSubC-0.5
Nucleus of the solitary tractipsiSol1
Nucleus of the solitary tract medial partipsiSolM0.5
Raphe nucleiipsiRAN1
Dorsal raphe nucleusipsiDR1
Dorsal raphe nucleus caudal partipsiDRC1.5
Dorsal raphe nucleus central partipsiDRcep1.5
Dorsal raphe nucleus dorsal coreipsiDRDc0.5
Dorsal raphe nucleus lateral wingipsiDRlw1.5
Dorsal raphe nucleus median partipsiDRM-0.5
Dorsal raphe nucleus pontine partipsiDRPo-0.5
Dorsal raphe nucleus rostral partipsiDRr1.5
Dorsal raphe nucleus ventral partipsiDRV0.5
Dorsal raphe nucleus ventrolateral partipsiDRVL0.5
Median raphe nucleusipsiMnR1
Paramedian raphe nucleusipsiPMnR-0.5
Pontine raphe nucleusipsiPnR-2
Median eminenceipsiME3
Endopiriform systemipsiEnN-0.5
Medial septum dorsal band complexipsiMSDB-0.5
Diagonal band of BrocaipsiDBB3
Angular part of the ventral diagonal bandipsiVDBVA3
Ventrolateral part of the ventral diagonal bandipsiVDBVVL2
Nucleus of the horizontal limb of the diagonal bandipsiHDB2
Nucleus of the horizontal limb of the diagonal band medial partipsiHDBm2
Nucleus of the vertical limb of the diagonal bandipsiVDB4
Nucleus of the diagonal band medial halfipsiDBBmh-0.5
Medial septal nucleusipsiMS3
Medial septal nucleus lateral partipsiMSLa1
Substantia innominataipsiSI2
Substantia innominata anterior partipsiSIA3
Substantia innominata posterior partipsiSIP3
Cell bridge between tuberomammillary nucleus and caudal magnocellular nucleusipsiCbTuMcm-0.5
Preoptic regionipsiPREO-0.5
Lateral preoptic areaipsiLPO2
Lateral preoptic area medial partipsiLPOm3
Lateral preoptic area ventromedial partipsiLPOvm-0.5
Lateral preoptic area dorsomedial partipsiLPOdm-0.5
Medial preoptic areaipsiMPA3
Magnocellular preoptic nucleusipsiMCPO3
Medial preoptic nucleusipsiMPO2.5
Medial preoptic nucleus dorsal partipsiMPOD-2
Median preoptic nucleusipsiMnPO3
Ventrolateral preoptic nucleusipsiVLPO3
Extended ventrolateral preoptic nucleusipsieVLPO3
Core of the ventrolateral preoptic areaipsiVLPOco4
Dorsal tuberomammillary nucleusipsiDTM-2
Ventral tuberomammillary nucleusipsiVTM3
Ventral tuberomammillary nucleus rostral partipsiVTMr-0.5
Ventral tuberomammillary nucleus coreipsiVTMc1
HypothalamusipsiHYPO-0.5
Dorsomedial hypothalamic nucleusipsiDMHy3
Dorsomedial hypothalamic nucleus non-compact partipsiDMHyncp3
Posterior region [Lateral division of the hypothalamus]ipsiPReg-1
Lateral hypothalamic area medial part [Preoptic anterior region]ipsiLHAmpar3
Lateral hypothalamic area posterior part [Preoptic anterior region]ipsiLHApPAR3
Lateral zoneipsiLHA3
Lateral hypothalamic areaipsiLH3
Lateral hypothalamic area perifornical partipsiPFx-0.5
Lateral hypothalamic area posterior partipsiLHAp2
Lateral hypothalamic nucleusipsiLHN2
Tuberal region of lateral hypothalamusipsiTuLH1
Lateral hypothalamic area intermediate partipsiLHim-0.5
Lateral hypothalamic area [Lateral zone mammillary level]ipsiLHLZM3
Lateral zone tuberal levelipsiLHt2
Lateral hypothalamic area [Lateral zone tuberal level]ipsiLHtu1
Tuberal nucleusipsiTU-1
Tuberal magnocellular nucleusipsiTUmag-0.5
Mediobasal hypothalamusipsiMeHypo2
Medial division of the hypothalamusipsiMdH4
Medial division of the hypothalamus dorsomedial lateral partipsiMdHdmL3
Medial division of the hypothalamus ventromedial lateral partipsiMdHvmL3
Medial division of the hypothalamus posterior lateral partipsiMdHpL3
Anterior hypothalamic areaipsiAHA3
Anteroventral periventricular nucleus [Anterior hypothalamic area]ipsiAVPe0
Anterior hypothalamic nucleus rostral zoneipsiAHnR2
Anterior part of the anterior hypothalamic nucleusipsiAHna2
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM2
Dorsomedial hypothalamic nucleus rostral partipsiDMro1
Parastriatal nucleusipsiPS-1
Posterior hypothalamic areaipsiPHA1
Caudal part of the caudal magnocellular nucleusipsiCMCC-2
Caudal magnocellular nucleus main portionipsiCMCmp3
Posterior hypothalamic nucleusipsiPH-0.5
Tuberal area ventral to the fornixipsiTAvf1
Ventromedial hypothalamic nucleusipsiVMH3
Ventromedial hypothalamic nucleus central partipsiVMHC3
Ventromedial hypothalamic nucleus medial partipsiVMHM0
Ventromedial hypothalamic nucleus perinuclear zoneipsiVMHpnz-0.5
Ventromedial hypothalamic nucleus rostral partipsiVMHR0
Ventromedial hypothalamic nucleus ventrolateral partipsiVMHVL3
Periventricular zoneipsiPVZ-0.5
Arcuate nucleusipsiArc3
Nucleus paraventricularis [Periventricular zone anterior region]ipsiPaPAR-0.5
Dorsomedial paraventricular hypothalamic nucleusipsiPaDM1
Paraventricular hypothalamic nucleus lateral magnocellular part [Periventricular zone anterior region]ipsiPaLM3
Paraventricular hypothalamic nucleus posterior part [Periventricular zone anterior region]ipsiPaPo1
Paraventricular hypothalamic nucleus medial parvicellular part [Periventricular zone anterior region]ipsiPaMP3
Paraventricular hypothalamic nucleus medial parvocellular partipsiMPPa-0.5
Paraventricular hypothalamic nucleus anterior parvicellular part [Periventricular zone anterior region]ipsiPaAP3
Paraventricular nucleus of the hypothalamus magnocellular division medial magnocellular partipsiPaAMm3
Paraventricular hypothalamic nucleusipsiPa4
Paraventricular hypothalamic nucleus magnocellular division between PaLM and PaAMmipsiPaMagb3
Paraventricular hypothalamic nucleus parvocellular division posterior partipsiPavPoP3
Paraventricular hypothalamic nucleus anterior parvicellular subdivisionipsiaPavPo3
Paraventricular hypothalamic nucleus perinuclear zoneipsiPapnz3
Paraventricular hypothalamic nucleus rostral partipsiPaRo-0.5
Paraventricular nucleus anterior partipsiPaan0.5
Paraventricular nucleus dorsal most portionipsiPaDom0.5
Paraventricular nucleus dorsal edgeipsiPaDoE1
Paraventricular nucleus medial partipsiPame-0.5
Paraventricular nucleus medial part at mid paraventricular hypothalamic nucleus levelipsiPamemi2
Paraventricular nucleus medial part at posterior paraventricular hypothalamic nucleus levelipsiPamepo2
Paraventricular hypothalamic nucleus dorsomedial capipsiPadmc3
Mid paraventricular hypothalamic nucleusipsiMiPa-0.5
Peri-paraventricular hypothalamic nucleusipsiPPa3
Ventral perinuclear paraventricular hypothalamic areaipsiPPaV3
Periventricular hypothalamic nucleusipsiPe-0.5
Preoptic periventricular nucleusipsiPePO-0.5
Subparaventricular zone of the hypothalamusipsiSPa-0.5
Suprachiasmatic nucleusipsiSCh-0.5
Suprachiasmatic nucleus perinuclear zoneipsiSChpnz3
Supraoptic nucleus [Supraoptic region]ipsiSO4
Perinuclear zone of the supraoptic nucleus of the hypothalamusipsipnzSO-0.5
Supraoptic nucleus dorsal partipsiSOd-0.5
Supraoptic nucleus perinuclear zoneipsiSOpnz3
Supraoptic nucleus ventral part [Supraoptic region]ipsiSOV4
Perinuclear zone dorsal to the supraoptic regionipsiSoRpnzd3
Mammillary bodyipsiCMAM-0.5
Lateral mammillary nucleusipsiLM1
Medial mammillary nucleusipsiMMn-0.5
Premammillary nucleusipsiPMAN-0.5
Premammillary nucleus dorsal partipsiPMD-2
Premammillary nucleus ventral partipsiPMV3
Supramammillar nucleusipsiSuM1
Supramammillar nucleus lateral partipsiSuML-2
Supramammillary decussationipsisumx-2
A8 dopamine cells retrorubral group lateral partipsiRRFL0
A8 dopamine cells retrorubral group medial partipsiRRFm2
Perifornical nucleusipsiPeF3
Perifornical nucleus anterior partipsiPeFa-2
Retrochiasmatic areaipsiRCh3
Cell bridge between the central medial thalamic nucleus and the mammillary recess of 3VipsiCMmr-2
Cell bridge between the central medial thalamic nucleus and the ventral tuberomammillary nucleusipsiCMmrLcV3
Mediodorsal thalamic nucleus central partipsiMDC-10
Mediodorsal thalamic nucleus lateral partipsiMDL-10
Mediodorsal thalamic nucleus medial partipsiMDM-10
Paratenial thalamic nucleusipsiPT-0.5
Paraventricular thalamic nucleusipsiPV1
Reuniens thalamic nucleusipsiRe2
Reuniens thalamic nucleus caudomedial divisionipsiRecm1
Reunienes thalamic nucleus rostromedial divisionipsiRerm2
Reuniens thalamic nucleus rostrolateral divisionipsiRerl3
Subfornical organipsiSFO0
Dorsal subfornical organipsiDSFO-2
Subfornical organ main partipsiSFOm0
Ventrolateral thalamic nucleusipsiVL3
Ventromedial thalamic nucleusipsiVM3
Intralaminar nucleiipsiILN1
Reticular thalamic nucleus intermediate partipsiRti-10
Reticular thalamic nucleus rostral partipsiRtr-10
Zona incerta medial tipipsiZImt2
Optic chiasmipsiox-2
Lateral habenular nucleusipsiLHb3
Lateral habenular nucleus medial partipsiLHbM3
Pineal glandipsiPi1
Medial forebrain bundleipsimfb-2
Medial forebrain bundle at the level of the anterior commissureipsimfbac-2
Medial forebrain bundle at the level of the lateral preoptic areraipsimfbLpa-2
Medial forebrain bundle at the level of the anterior hypothalamic nucleusipsimfbahn0
Medial forebrain bundle at the level of the lateral hypothalamusipsimfbLH-2
Medial forebrain bundle at the level of the posterior hypothalamic nucleusipsimfbPH-2
Medial forebrain bundle ventromedial partipsimfbvm-2
Stria medullaris of the thalamusipsism0
Perifornical fiber systemipsipffs-2
Septohypothalamic pathwayipsisehyp-2
Amygdaloid complexipsiAC3
Basal nucleus parvicellular part caudolateral regionipsiBpccl-0.5
Ventromedial part of the lateral nucleusipsiLaVM-0.5
Bed nucleus of the stria terminalisipsiBST3
Bed nucleus of the stria terminalis anterior dorsal areaipsiBSTAD2
Bed nucleus of the stria terminalis anterior lateral areaipsiBSTAL2
Bed nucleus of the stria terminalis caudal part caudoventral regionipsiBSTCacv1
Bed nucleus of the stria terminalis caudal part perifornical regionipsiBSTCapf1
Bed nucleus of the stria terminalis lateral divisionipsiBSTL3
Bed nucleus of the stria terminalis lateral division ventral partipsiBSTLV-0.5
Bed nucleus of the stria terminalis medial divisionipsiBSTM3
Posterior amygdaloid nucleusipsiCOAp1
Medial amygdaloid nucleusipsiMe1.5
Amygdalohippocampal areaipsiAHi2
Peripallidal regionipsiPePa0
Subpallidal regionipsiSuPa2
Ventral pallidumipsiVP3
Accumbens nucleus coreipsiAcbC3
Accumbens nucleus posterolateral partipsiAcbpl1
Accumbens nucleus shellipsiAcbSh2
Rostrodorsal accumbens nucleus shellipsiAcbShRD3
Lateral nucleus accumbensipsiAcl0.5
Medial accumbensipsiAcbM0.5
Caudate putamenipsiCPu0.5
Parasubthalamic nucleusipsiPSTh0.5
HippocampusipsiHIPP-2
Dorsal hippocampusipsiHIPPd1
Hippocampal septalipsiHIPPs0
Dorsal hippocampus dentate gyrusipsiDDG3
Ventral hippocampus dentate gyrusipsiVDG3
Ammon hornipsiAmH-0.5
Field CA1 of hippocampus layer stratum pyramidaleipsiCA1pyr-0.5
Field CA2 of hippocampus layer stratum pyramidaleipsiCA2pyr-0.5
Field CA3 of hippocampus layer stratum pyramidaleipsiCA3pyr-0.5
Field CA4 of hippocampus pyramidal layeripsiCA4Lpy-0.5
Subiculum dorsal partipsiSd-0.5
Ventral hippocampusipsiHIPPv0.5
Granular layer of the dentate gyrusipsiGrDG-0.5
Stratum moleculare of the hippocampusipsiLNolsmo-0.5
Oriens layer of the hippocampusipsiOr-0.5
Fornixipsif-2
Fornix coreipsifcore-2
Presubiculum dorsal part deep layersipsiPrDLD-0.5
ParasubiculumipsiPaS-0.5
Entorhinal cortexipsiEnt-0.5
Lateral entorhinal cortexipsiLEnt1.5
Lateral entorhinal cortex ventral part layer 2ipsiVLEAL21
Lateral entorhinal cortex ventral part layer 4ipsiVLEAL43
Medial entorhinal cortexipsiMEnt1
Medial entorhinal cortex layer 2ipsiMEntLyL21
Medial entorhinal cortex layer 4ipsiMEntLyL43
Ventral entorhinal cortex layersipsiEntVeL-0.5
Piriform cortexipsiPir3
Retrosplenial regionsipsiRS-0.5
Cingulate cortexipsiCg0
Prelimbic cortexipsiPrL-0.5
Infralimbic cortexipsiIL1.5
Infralimbic cortex rostral partipsiILR1
Perirhinal cortexipsiA351.5
Ectorhinal cortexipsiA361
Postrhinal cortexipsiPOR1
Medial prefrontal cortexipsimPFC2
Primary visual cortexipsiV1-0.5
Lateral orbital cortexipsiLO1
Ventral orbital cortexipsiVO1
Interpeduncular nucleusipsiIP0.5
Interpeduncular nucleus caudal subnucleusipsiIPC1
Interpeduncular nucleus dorsal subnucleusipsiIPRd1
Interpeduncular nucleus medial part middle partipsiIPMM1
Olfactory tubercle medial partipsiTuOMP0.5
Lateral septal nucleusipsiLS1
Lateral septal nucleus rostral partipsiLSr-0.5
Lateral septal nucleus ventral partipsiLSV1
Septofimbrial nucleusipsiSFi1
Top of 3d ventricleipsiT3V1
Lateral ventricleipsiLV-0.5
Cervical segment 7ipsiCS7-1
Intermediolateral cell column T5ipsiIMLT50
Intermediolateral cell column T6ipsiIMLT60
Intermediolateral cell column T7ipsiIMLT70
Intermediolateral cell column T8ipsiIMLT80
Intermediolateral cell column T9ipsiIMLT90
Intermediolateral cell column T10ipsiIMLT100
Liver sideipsiOrgsLivs1
Nasal cavityipsiOrgNaCa3

Input from

NameSideAbbr.WeightDetails
Central graycontraCG1
Central gray lateral partcontraCGL0.5
Medial tegmental fieldcontraMTF1
Ventral tegmental area A10contraVTA1
Ventral tegmental area A10 medial partcontraVTAM3
Laterodorsal tegmental nucleuscontraLDTg3
Laterodorsal tegmental nucleus dorsolateral partcontraLDTgDL1
Laterodorsal tegmental nucleus dorsomedial partcontraLDTgDM0.5
Laterodorsal tegmental nucleus ventromedial partcontraLDTgVM0.5
Laterodorsal tegmental nucleus ventrolateral partcontraLDTgVL0.5
Dorsal tegmental nucleuscontraDTg1
Dorsal tegmental nucleus lateral partcontraDLTN1
Central gray matter surrounding the dorsal tegmental nucleus of GuddencontraTGAGcgm1
Dorsolateral edge of the superior cerebellar pedunclecontrasucepdL1
Locus coeruleuscontraLC0.5
Reticular systemcontraRF-0.5
Koelliker Fuse nucleus dorsal partcontraKFD1
Lateral parabrachial nucleuscontraLPB0.5
Parabrachial nucleus medialcontraPBnMe1
Subcoeruleus nucleuscontraSubC1
Raphe nucleicontraRAN1
Dorsal raphe nucleuscontraDR0.5
Dorsal raphe nucleus caudal partcontraDRC3
Dorsal raphe nucleus dorsal partcontraDRD0.5
Dorsal raphe nucleus lateral partcontraDRLa0.5
Dorsal raphe nucleus ventral partcontraDRV0.5
Median raphe nucleuscontraMnR1
Raphe magnus nucleus rostral partcontraRMgR2
Medial preoptic areacontraMPA-0.5
Caudal pole of medial preoptic areacontraMPAc1
Medial preoptic nucleuscontraMPO-0.5
HypothalamuscontraHYPO1
Lateral hypothalamic nucleuscontraLHN1
Tuberal nucleuscontraTU1.5
Anterior hypothalamic area immediately caudal to the suprachiasmatic areacontraAHAcSCh-0.5
Anterior hypothalamic nucleuscontraAHn1
Ventromedial hypothalamic nucleuscontraVMH0
Ventromedial hypothalamic nucleus anterior partcontraVMHA0.5
Ventromedial hypothalamic nucleus central partcontraVMHC0.5
Ventromedial hypothalamic nucleus dorsomedial partcontraVMHDM1
Ventromedial hypothalamic nucleus ventrolateral partcontraVMHVL1
Preoptic periventricular nucleuscontraPePO-0.5
Suprachiasmatic nucleus dorsal divisioncontraSChd-0.5
Suprachiasmatic nucleus dorsomedial partcontraSCnDM-0.5
Suprachiasmatic nucleus ventrolateral partcontraSCnVL-0.5
Region dorsal to suprachiasmatic nucleuscontraSChDT-0.5
Suprachiasmatic nucleus core regioncontraSChCo0.5
Suprachiasmatic preoptic nucleuscontraPSCh-0.5
Perifornical nucleuscontraPeF1
Retrochiasmatic area immediately caudal to the suprarchiasmatic areacontraRChcSCh-0.5
Bed nucleus of the stria terminalis anterior medial partcontraBSTAM1
Bed nucleus of the stria terminalis intermediate divisioncontraBSTI-0.5
Posterior amygdaloid nucleuscontraCOAp0.5
Medial amygdaloid nucleus anterodorsal partcontraMeAD2
HippocampuscontraHIPP2
Hippocampal septalcontraHIPPs0.5
Hilus of the dentate gyruscontraHil-0.5
Field CA1 of hippocampuscontraCA10
Field CA1 of hippocampus layer stratum radiatumcontraCA1rad-0.5
Field CA1 of hippocampus layer stratum orienscontraCA1or-0.5
Field CA1 of hippocampus temporal polecontraCA1tp0
Field CA1 of hippocampus splenial one-thirdcontraCA1ot0
Field CA2 of hippocampuscontraCA23
Field CA3 of hippocampuscontraCA33
Field CA3 of hippocampus layer stratum lacunosumcontraCA3L6sla-0.5
Field CA3 of hippocampus layer stratum molecularecontraCA3L7sm-0.5
Field CA3 of hippocampus layer stratum radiatumcontraCA3rad-0.5
Field CA3 of hippocampus layer stratum lucidumcontraCA3sl-0.5
Field CA3 of hippocampus layer stratum pyramidalecontraCA3pyr-0.5
Field CA3 of hippocampus layer stratum pyramidale pyramidal neuronscontraCA3L3spy-0.5
Field CA3 of hippocampus layer stratum orienscontraCA3or-0.5
SubiculumcontraS0
Lateral entorhinal cortexcontraLEnt0.5
Interpeduncular nucleuscontraIP1
Lateral septal nucleuscontraLS0
Lateral spinal nucleus C1contraLSpC1-0.5
Area X C1contraSCL10C1-0.5
Deep dorsal horn C1contraDDHC1-0.5
Spinal cord layer 5 C1contraSCL5C1-0.5
Lateral spinal nucleus C2contraLSpC2-0.5
Area X C2contraSCL10C2-0.5
Deep dorsal horn C2contraDDHC2-0.5
Spinal cord layer 5 C2contraSCL5C2-0.5
Lateral spinal nucleus C3contraLSpC3-0.5
Area X C3contraSCL10C3-0.5
Deep dorsal horn C3contraDDHC3-0.5
Spinal cord layer 5 C3contraSCL5C3-0.5
Lateral spinal nucleus C4contraLSpC4-0.5
Area X C4contraSCL10C4-0.5
Deep dorsal horn C4contraDDHC4-0.5
Spinal cord layer 5 C4contraSCL5C4-0.5
Lateral spinal nucleus C5contraLSpC5-0.5
Area X C5contraSCL10C5-0.5
Deep dorsal horn C5contraDDHC5-0.5
Spinal cord layer 5 C5contraSCL5C5-0.5
Lateral spinal nucleus C6contraLSpC6-0.5
Area X C6contraSCL10C6-0.5
Deep dorsal horn C6contraDDHC6-0.5
Spinal cord layer 5 C6contraSCL5C6-0.5
Lateral spinal nucleus C7contraLSpC7-0.5
Area X C7contraSCL10C7-0.5
Deep dorsal horn C7contraDDHC7-0.5
Spinal cord layer 5 C7contraSCL5C7-0.5
Lateral spinal nucleus C8contraLSpC8-0.5
Area X C8contraSCL10C8-0.5
Deep dorsal horn C8contraDDHC8-0.5
Spinal cord layer 5 C8contraSCL5C8-0.5
Lateral spinal nucleus T1contraLSpT1-0.5
Area X T1contraSCL10T1-0.5
Deep dorsal horn T1contraDDHT1-0.5
Spinal cord layer 5 T1contraSCL5T1-0.5
Lateral spinal nucleus T2contraLSpT2-0.5
Area X T2contraSCL10T2-0.5
Deep dorsal horn T2contraDDHT2-0.5
Spinal cord layer 5 T2contraSCL5T2-0.5
Lateral spinal nucleus T3contraLSpT3-0.5
Area X T3contraSCL10T3-0.5
Deep dorsal horn T3contraDDHT3-0.5
Spinal cord layer 5 T3contraSCL5T3-0.5
Lateral spinal nucleus T4contraLSpT4-0.5
Area X T4contraSCL10T4-0.5
Deep dorsal horn T4contraDDHT4-0.5
Spinal cord layer 5 T4contraSCL5T4-0.5
Lateral spinal nucleus T5contraLSpT5-0.5
Area X T5contraSCL10T5-0.5
Deep dorsal horn T5contraDDHT5-0.5
Spinal cord layer 5 T5contraSCL5T5-0.5
Lateral spinal nucleus T6contraLSpT6-0.5
Area X T6contraSCL10T6-0.5
Deep dorsal horn T6contraDDHT6-0.5
Spinal cord layer 5 T6contraSCL5T6-0.5
Lateral spinal nucleus T7contraLSpT7-0.5
Area X T7contraSCL10T7-0.5
Deep dorsal horn T7contraDDHT7-0.5
Spinal cord layer 5 T7contraSCL5T7-0.5
Lateral spinal nucleus T8contraLSpT8-0.5
Area X T8contraSCL10T8-0.5
Deep dorsal horn T8contraDDHT8-0.5
Spinal cord layer 5 T8contraSCL5T8-0.5
Lateral spinal nucleus T9contraLSpT9-0.5
Area X T9contraSCL10T9-0.5
Deep dorsal horn T9contraDDHT9-0.5
Spinal cord layer 5 T9contraSCL5T9-0.5
Lateral spinal nucleus T10contraLSpT10-0.5
Area X T10contraSCL10T10-0.5
Deep dorsal horn T10contraDDHT10-0.5
Spinal cord layer 5 T10contraSCL5T10-0.5
Lateral spinal nucleus T11contraLSpT11-0.5
Area X T11contraSCL10T11-0.5
Deep dorsal horn T11contraDDHT11-0.5
Spinal cord layer 5 T11contraSCL5T11-0.5
Lateral spinal nucleus T12contraLSpT12-0.5
Area X T12contraSCL10T12-0.5
Deep dorsal horn T12contraDDHT12-0.5
Spinal cord layer 5 T12contraSCL5T12-0.5
Lateral spinal nucleus T13contraLSpT13-0.5
Area X T13contraSCL10T13-0.5
Deep dorsal horn T13contraDDHT13-0.5
Spinal cord layer 5 T13contraSCL5T13-0.5
Lateral spinal nucleus L1contraLSpL1-0.5
Area X L1contraSCL10L1-0.5
Deep dorsal horn L1contraDDHL1-0.5
Spinal cord layer 5 L1contraSCL5L1-0.5
Lateral spinal nucleus L2contraLSpL2-0.5
Area X L2contraSCL10L2-0.5
Deep dorsal horn L2contraDDHL2-0.5
Spinal cord layer 5 L2contraSCL5L2-0.5
Lateral spinal nucleus L3contraLSpL3-0.5
Area X L3contraSCL10L3-0.5
Deep dorsal horn L3contraDDHL3-0.5
Spinal cord layer 5 L3contraSCL5L3-0.5
Lateral spinal nucleus L4contraLSpL4-0.5
Area X L4contraSCL10L4-0.5
Deep dorsal horn L4contraDDHL4-0.5
Spinal cord layer 5 L4contraSCL5L4-0.5
Lateral spinal nucleus L5contraLSpL5-0.5
Area X L5contraSCL10L5-0.5
Deep dorsal horn L5contraDDHL5-0.5
Spinal cord layer 5 L5contraSCL5L5-0.5
Lateral spinal nucleus L6contraLSpL6-0.5
Area X L6contraSCL10L6-0.5
Deep dorsal horn L6contraDDHL6-0.5
Spinal cord layer 5 L6contraSCL5L6-0.5
Lateral spinal nucleus S1contraLSpS1-0.5
Area X S1contraSCL10S1-0.5
Deep dorsal horn S1contraDDHS1-0.5
Spinal cord layer 5 S1contraSCL5S1-0.5
Lateral spinal nucleus S2contraLSpS2-0.5
Area X S2contraSCL10S2-0.5
Deep dorsal horn S2contraDDHS2-0.5
Spinal cord layer 5 S2contraSCL5S2-0.5
Lateral spinal nucleus S3contraLSpS3-0.5
Area X S3contraSCL10S3-0.5
Deep dorsal horn S3contraDDHS3-0.5
Spinal cord layer 5 S3contraSCL5S3-0.5
Lateral spinal nucleus S4contraLSpS4-0.5
Area X S4contraSCL10S4-0.5
Deep dorsal horn S4contraDDHS4-0.5
Spinal cord layer 5 S4contraSCL5S4-0.5
Lateral spinal nucleus Co1contraLSpCo1-0.5
Deep dorsal horn Co1contraDDHCo1-0.5
Lateral spinal nucleus Co2contraLSpCo2-0.5
Deep dorsal horn Co2contraDDHCo2-0.5
Lateral spinal nucleus Co3contraLSpCo3-0.5
Deep dorsal horn Co3contraDDHCo3-0.5
Central grayipsiCG3
Central gray lateral partipsiCGL1
Central grey caudal areaipsicCG-0.5
Dorsolateral periaqueductal grayipsiDLPAG-0.5
Periaqueductal gray rostral poleipsiPAGr2
Ventral periaqueductal grayipsiVPAG-0.5
Medial tegmental fieldipsiMTF-0.5
Peduncularpontine nucleusipsiPPN0.5
Substantia nigra A9ipsiSN-0.5
Substantia nigra compact part medial tieripsiSNCM0.5
Most medial part of the substantia nigra compact partipsiSNCmM-0.5
Substantia nigra compact part mid-dorsal sectoripsiSNCmid2
Substantia nigra medial partipsiSNM2
Ventral tegmental area A10ipsiVTA3
Ventral tegmental area A10 dorsolateral partipsiVTAdL1
Ventral tegmental area A10 lateral nucleiipsiVTALN1
Ventral tegmental area A10 lateral partipsiVTAL2
Ventral tegmental area A10 medial nucleiipsiVTAmn2
Interfascicular nucleusipsiIF-0.5
Ventral tegmental area A10 medial partipsiVTAM1
Ventral tegmental area A10 ventral partipsiVTAv-0.5
Caudal portion portion of the ventral tegmental area A10 ventral partipsiVTAvc3
Ventral tegmental area A10 ventrolateral partipsiVTAvl-0.5
Ventral tegmental area rostral partipsiVTAR1
Rostral half of the ventral tegmental area rostral partipsiVTARR-0.5
Ventral tegmental area rostrodorsolateral partipsiVTARDL1
Ventral tegmental area anterior partipsiVTAA-0.5
Ventral tegmental area posterior partipsiVTAP1
Ventral tegmental area A10 dorsomedial partipsiVTAdm3
Paranigral nucleusipsiPN0.5
Lateral dorsal sector of the nucleus paranigralisipsiPNLD2
Caudal linear nucleus of the rapheipsiCLi1
Laterodorsal tegmental nucleusipsiLDTg3
Laterodorsal tegmental nucleus dorsolateral partipsiLDTgDL2.5
Laterodorsal tegmental nucleus dorsomedial partipsiLDTgDM1
Laterodorsal tegmental nucleus ventromedial partipsiLDTgVM1
Laterodorsal tegmental nucleus ventrolateral partipsiLDTgVL1
Dorsal tegmental nucleusipsiDTg2
Dorsal tegmental nucleus lateral partipsiDLTN2
Central gray matter surrounding the dorsal tegmental nucleus of GuddenipsiTGAGcgm3
Pedunculopontine tegmental nucleusipsiPPTg2
Dorsolateral edge of the superior cerebellar peduncleipsisucepdL-0.5
Barringtons nucleusipsiBar2
Locus coeruleusipsiLC3
Locus coeruleus rostrocaudal partipsiLCcBrc-0.5
Prelocus coeruleus nucleusipsiPLC1
Ventromedial border of the locus coeruleusipsibLCVM2
Reticular systemipsiRF-0.5
Pontine reticular nucleus oral partipsiPnO1
Koelliker Fuse nucleusipsiKF3
Koelliker Fuse nucleus dorsal partipsiKFD1
Lateral parabrachial nucleusipsiLPB3
Parabrachial nucleus medialipsiPBnMe3
Parabrachial nucleus ventral partipsiPBV2
Parabrachial nucleus waist partipsiPBW1
Gigantocellular reticular nucleusipsiGi1
Subcoeruleus nucleusipsiSubC-0.5
Mesencephalic trigeminal nucleusipsiMe51
Nucleus of the solitary tractipsiSol2
Raphe nucleiipsiRAN-0.5
Dorsal raphe nucleusipsiDR2
Dorsal raphe nucleus caudal partipsiDRC3
Dorsal extent of the dorsal raphe nucleus caudal partipsiDRCD2
Ventral part of the caudal dorsal raphe nucleusipsiDRCV2
Dorsal raphe nucleus central partipsiDRcep1.5
Dorsal raphe nucleus dorsal partipsiDRD0.5
Dorsal raphe nucleus lateral partipsiDRLa0.5
Ventromedial medial part of the dorsal raphe nucleusipsiDRNMVM1
Dorsal raphe nucleus rostral partipsiDRr2
Dorsal raphe nucleus most rostral partipsiDRmr0
Dorsal raphe nucleus rostral tipipsiDRrt0.5
Dorsal raphe nucleus ventral partipsiDRV0.5
Most rostral section of the ventromedial subdivision dorsal raphe nucleusipsiDRvmre-0.5
Rostral linear nucleus of the rapheipsiRLi-0.5
Median raphe nucleusipsiMnR2
Medial raphe nucleusipsiMeR2
Superior central raphe nucleusipsiCS3
Median raphe nucleus dorsocaudal partipsiMnRdc-0.5
Paramedian raphe nucleusipsiPMnR-0.5
Pontine raphe nucleusipsiPnR1
Raphe magnus nucleus rostral partipsiRMgR2
A1 noradrenergic cellsipsiA13
A2 noradrenergic cellsipsiA22
Dorsal paragigantocellular nucleusipsiDPGi1
Basal forebrainipsiBAF-2
Dorsal fornixipsidf-2
Median eminenceipsiME-0.5
Endopiriform systemipsiEnN-1
Diagonal band of BrocaipsiDBB3
Nucleus of the horizontal limb of the diagonal bandipsiHDB3
Nucleus of the vertical limb of the diagonal bandipsiVDB4
Medial septal nucleusipsiMS1
Medial septal nucleus mid-dorsal aspectipsiMSmda-0.5
Substantia innominata ventral partipsiSIV-0.5
Lateral preoptic areaipsiLPO3
Lateral preoptic lateral hypothalamic continuumipsiLPOLH3
Medial preoptic areaipsiMPA3
Caudal pole of medial preoptic areaipsiMPAc3
Lateral preoptic nucleusipsiLPN-0.5
Medial preoptic nucleusipsiMPO2
Medial preoptic nucleus central partipsiMPOC2
Periventricular area of the preoptic regionipsiPVPREO3
HypothalamusipsiHYPO1
Dorsomedial hypothalamic nucleusipsiDMHy1.5
Caudal part of the dorsomedial hypothalamic nucleusipsiDMHyC-0.5
Dorsal regionipsiDHR-0.5
Perifornical hypothalamic area [Preoptic anterior region]ipsiPFxPAR-0.5
Perifornical hypothalamic area [Region of tuber cinereum]ipsiPFxRTC-0.5
Lateral zoneipsiLHA-0.5
Area periventricularis hypothalamica dorsalisipsiAPD-0.5
Lateral hypothalamic areaipsiLH3
Lateral hypothalamic area anterior partipsiLHAa3
Lateral hypothalamic area perifornical partipsiPFx3
Lateral hypothalamic area perifornical part rostral partipsirPFx3
Lateral hypothalamic area posterior partipsiLHAp3
Lateral hypothalamic nucleusipsiLHN-0.5
Tuberal region of lateral hypothalamusipsiTuLH-0.5
Basal lateral hypothalamusipsiBLH-0.5
Most anterior part of the parvalbumin-positive nucleus of the lateral hypothalamusipsiPV1ma-0.5
Lateroanterior hypothalamic nucleusipsiLAH-0.5
Tuberal division of the lateral hypothalamic areaipsiLHTC3
Tuberal nucleusipsiTU3
Mediobasal hypothalamusipsiMeHypo-1
Anterior hypothalamic areaipsiAHA3
Anterior hypothalamic area central partipsiAHAC-0.5
Anterior hypothalamic area lateral partipsiAHAl2
Anterior hypothalamic area posterior partipsiAHAP-0.5
Anterior hypothalamic area ventral partipsiAHAve1
Anterior hypothalamic area ventrolateralipsiAHAvL-0.5
Anterior hypothalamic nucleus ventromedial partipsiAHAvm2.5
Dorsal periventricular nucleus [Anterior hypothalamic area]ipsiDPe3
Anterior hypothalamic area caudal partipsiAHAca-0.5
Anterior hypothalamic area immediately caudal to the suprachiasmatic areaipsiAHAcSCh1
Anterior hypothalamic nucleusipsiAHn3
Anterior part of the anterior hypothalamic nucleusipsiAHna3
Anteroventral preoptic nucleusipsiAnV-0.5
Area ventrolateral to the anterior hypothalamic nucleusipsivlAH-0.5
Dorsal hypothalamic areaipsiDA-0.5
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM3
Dorsomedial hypothalamic nucleus dorsomedial partipsiDMDM3
Posterior hypothalamic areaipsiPHA1
Posterior hypothalamic nucleusipsiPH-0.5
Posterior hypothalamic nucleus rostral partipsiPHRo-0.5
Subparaventricular zoneipsiSuPZ3
Subparaventricular zone ventral partipsiSuPZv2
Lateral part of ventral subparaventricular zoneipsiSuPZvL2
Caudal subparaventricular zoneipsiCSuPZ2.5
Subparaventricular zone ventromedial partipsiSuPZvm3
Subparaventricular zone dorsomedial partipsiSuPZdm1
Subparaventricular zone dorsolateral partipsiSuPZdL3
Ventromedial hypothalamic nucleusipsiVMH3
Ventromedial hypothalamic nucleus anterior partipsiVMHA1
Ventromedial hypothalamic nucleus central partipsiVMHC2
Ventromedial hypothalamic nucleus dorsomedial partipsiVMHDM1
Ventromedial hypothalamic nucleus shellipsiVMS4
Ventromedial hypothalamic nucleus ventrolateral partipsiVMHVL3
Periventricular zoneipsiPVZ-0.5
Arcuate nucleusipsiArc1
Nucleus paraventricularis [Periventricular zone anterior region]ipsiPaPAR-0.5
Paraventricular hypothalamic nucleus posterior part [Periventricular zone anterior region]ipsiPaPo-0.5
Paraventricular nucleus of the hypothalamus magnocellular division anterior magnocellular partipsiPaAMa3
Paraventricular hypothalamic nucleusipsiPa0.5
Paraventricular hypothalamic nucleus fornical partsipsiPaF-0.5
Paraventricular hypothalamic nucleus parvocellular divisionipsiPavPo-0.5
Periventricular hypothalamic nucleusipsiPe3
Preoptic periventricular nucleusipsiPePO2.5
Subparaventricular zone of the hypothalamusipsiSPa3
Suprachiasmatic nucleusipsiSCh3
Suprachiasmatic nucleus dorsal divisionipsiSChd2.5
Suprachiasmatic nucleus dorsomedial partipsiSCnDM2
Suprachiasmatic nucleus ventrolateral partipsiSCnVL2
Suprachiasmatic nucleus ventromedial partipsiSChVM-0.5
Region dorsal to suprachiasmatic nucleusipsiSChDT2.5
Suprachiasmatic nucleus shell regionipsiSChS1
Suprachiasmatic nucleus core regionipsiSChCo3
Suprachiasmatic preoptic nucleusipsiPSCh3
Supraoptic nucleus [Supraoptic region]ipsiSO-0.5
Incerto hypothalamic areaipsiicHYPO1
Mammillary bodyipsiCMAM-0.5
Lateral mammillary nucleusipsiLM3
Premammillary nucleus dorsal partipsiPMD3
Premammillary nucleus ventral partipsiPMV3
Submammillothalamic nucleusipsiSMT3
Supramammillar nucleusipsiSuM3
Supramammillar nucleus lateral partipsiSuML-0.5
A8 dopamine cells retrorubral groupipsiRRF0
Perifornical nucleusipsiPeF-0.5
Ventrolateral perifornical areaipsiPeFVL-0.5
Retrochiasmatic areaipsiRCh1
Basal retrochiasmatic areaipsiBRCh1
Retrochiasmatic area lateral partipsiRChL-0.5
Retrochiasmatic area immediately caudal to the suprarchiasmatic areaipsiRChcSCh1
Anterior group of the dorsal thalamusipsiATN-0.5
Anterodorsal thalamic nucleusipsiAD-0.5
Interoanterodorsal thalamic nucleusipsiIAD-0.5
Paracentral thalamic nucleusipsiPC2
Rhomboid thalamic nucleusipsiRh-0.5
Mediodorsal thalamic nucleusipsiMD-0.5
Paratenial thalamic nucleusipsiPT1
Paraventricular thalamic nucleusipsiPV3
Paraventricular thalamic nucleus anterior partipsiPVA1
Paraventricular thalamic nucleus caudal partipsiPVca2
Paraventricular thalamic nucleus posterior partipsiPVP2
Paraventricular thalamic nucleus rostral partipsiPVr2
Reuniens thalamic nucleusipsiRe-0.5
Nucleus reuniens rostral division dorsal partipsiRERd1
Subfornical organipsiSFO-2
Subfornical organ main partipsiSFOm0
Posterior intralaminar thalamic nucleusipsiPIL2
Reticular thalamic nucleusipsiRt2
Reticular thalamic nucleus rostrocaudal partipsiRtrc1.5
Subparafascicular thalamic nucleusipsiSPF2
Zona incertaipsiZI3
Zona incerta medial partipsiZIm2
Tuber cinereum areaipsiTC2
Optic chiasmipsiox2
Medial habenular nucleusipsiMHb-0.5
Corpus callosumipsicc-0.5
Medial forebrain bundleipsimfb-2
TelencephalonipsiTEL-0.5
Amygdaloid complexipsiAC3
Basal nucleusipsiBnc2
Accessory basal nucleusipsiAB2
Basolateral amygdaloid nucleusipsiBL2
Basolateral nucleus caudal partipsiBLCP2.5
Basomedial amygdaloid nucleusipsiBM2
Posterior basomedial nucleusipsiBMP1
Lateral amygdaloid nucleusipsiLA2
Bed nucleus of the stria terminalisipsiBST3
Bed nucleus of the stria terminalis anterior divisionipsiBSTA3
Bed nucleus of the stria terminalis anterior division dorsomedial nucleusipsiBSTdm2
Bed nucleus of the stria terminalis anterior medial partipsiBSTAM3
Bed nucleus of the stria terminalis anterior ventral areaipsiBSTAV1
Bed nucleus of the stria terminalis fusiform partipsiFu1
Bed nucleus of the stria terminalis magnocellular nucleusipsiBSTmc1
Bed nucleus of the stria terminalis oval nucleusipsiBSTo0.5
Bed nucleus of the stria terminalis intermediate divisionipsiBSTI-0.5
Bed nucleus of the stria terminalis lateral divisionipsiBSTL-0.5
Bed nucleus of the stria terminalis medial divisionipsiBSTM-1
Bed nucleus of the stria terminalis ventral partipsiBNSTv-0.5
Central amygdaloid nucleusipsiCe2
Amygdalopiriform transition area posteromedial partipsiAPir_PM-1
Cortical amygdaloid nucleusipsiCAn2
Anterior cortical amygdaloid nucleusipsiACo2
Posterior amygdaloid nucleusipsiCOAp3
Medial amygdaloid nucleusipsiMe3
Medial amygdaloid nucleus anterodorsal partipsiMeAD-0.5
Medial amygdaloid nucleus anteroventral partipsiMeAV1
Medial amygdaloid nucleus posterior partipsiMePo1
Medial amygdaloid nucleus posterodorsal partipsiMePD1
Medial amygdaloid nucleus posteroventral partipsiMePV-0.5
Amygdalohippocampal areaipsiAHi2
Amygdalostriatal transition area intermediolateral partipsiAPirIML-1
Peripallidal regionipsiPePa0
Subpallidal regionipsiSuPa2
Accumbens nucleusipsiAc3
Rostrodorsal accumbens nucleus shellipsiAcbShRD2
Caudate putamenipsiCPu-0.5
HippocampusipsiHIPP3
Anterior hippocampal formationipsiAHCf-0.5
Anterior hippocampal continuationipsiAHCC-2
Dorsal hippocampusipsiHIPPd-0.5
Hippocampal septalipsiHIPPs0.5
Dentate gyrusipsiDG2
Dorsal hippocampus dentate gyrusipsiDDG-0.5
Hilus of the dentate gyrusipsiHil2
Mossy cells in Amarals zone 4ipsiHilagrMc2
Hilus of the dentate gyrus pyramidal cellsipsiHilpy2
Hilus of the dentate gyrus spiny multipolar cellsipsiHilsm2
Hilus of the dentate gyrus small stellate cellsipsiHilss1
Hilus of the dentate gyrus medium sized stellate cellsipsiHilms1
Ammon hornipsiAmH-0.5
Field CA1 of hippocampusipsiCA13
Field CA1 of hippocampus dorsalipsiCA1d3
Field CA1 of hippocampus dorsal layer stratum oriensipsiCA1dL2so-0.5
Field CA1 of hippocampus dorsal layer stratum pyramidaleipsiCA1dL3sp-0.5
Field CA1 of hippocampus layer alveusipsiCA1L1a2
Field CA1 of hippocampus layer stratum radiatumipsiCA1rad2
Field CA1 of hippocampus layer stratum pyramidal cellsipsiCA1L3spc-0.5
Field CA1 of hippocampus layer stratum oriensipsiCA1or2
Field CA1 of hippocampus temporal poleipsiCA1tp-0.5
Field CA1 of hippocampus ventral partipsiCA1v-0.5
Field CA1 of hippocampus splenial one-thirdipsiCA1ot-0.5
Field CA2 of hippocampusipsiCA24
Field CA2 of hippocampus layer stratum radiatumipsiCA2rad2
Field CA2 of hippocampus layer stratum secondary axon of commissural fibers of pyramidale pyramidal cellsipsiCA2L3scfpy-0.5
Field CA2 of hippocampus layer stratum oriensipsiCA2or2
Field CA2 of hippocampus layer alveusipsiCA2L1a2
Field CA3 of hippocampusipsiCA34
Field CA3 of hippocampus dorsal partipsiCA3d-0.5
Field CA3 of hippocampus layer stratum lacunosumipsiCA3L6sla-0.5
Field CA3 of hippocampus layer stratum moleculareipsiCA3L7sm-0.5
Field CA3 of hippocampus layer stratum radiatumipsiCA3rad2
Field CA3 of hippocampus layer stratum lucidumipsiCA3sl-0.5
Field CA3 of hippocampus layer stratum pyramidaleipsiCA3pyr-0.5
Field CA3 of hippocampus layer stratum pyramidale pyramidal neuronsipsiCA3L3spy-0.5
Field CA3 of hippocampus layer stratum oriensipsiCA3or2
Field CA3 of hippocampus layer alveusipsiCA3L1a2
Field CA3a of hippocampus pyramidal cell layer secondary axon from commissural fibers of pyramidal cellsipsiCA3aLcfpyc-0.5
Field CA4 of hippocampusipsiCA41
SubiculumipsiS3
Most mediaL subicular cortexipsiSuMMe0
Subiculum most proximal partipsiSmpx1
Subiculum ventral partipsiSv2
Ventral hippocampusipsiHIPPv3
Regio superior of the posteroventral hippocampal formationipsiHIPPspv-0.5
Fornixipsif-2
Entorhinal cortexipsiEnt-0.5
Lateral entorhinal cortexipsiLEnt0.5
Medial entorhinal cortexipsiMEnt-0.5
Cingulate cortexipsiCg1
Cingulate cortex area 1 caudal partipsiCg1c0.5
Cingulate cortex area 2 caudal partipsiCg2c0.5
Prelimbic cortex dorsal partipsiPrLd1
Prelimbic cortex ventral partipsiPrLv0.5
Infralimbic cortexipsiIL3
Infralimbic cortex rostral partipsiILR2.5
Association regionsipsiASR-0.5
Frontal cortex area 2ipsiFr20.5
Perirhinal cortexipsiA351
Medial orbital cortexipsiMO1
Ventral orbital cortexipsiVO1
Precommissural nucleusipsiPrC-2
Anterior commissural nucleusipsiACOS-0.5
Interpeduncular nucleusipsiIP3
Interpeduncular nucleus caudal subnucleusipsiIPC2
Interpeduncular nucleus dorsal subnucleus magnocellular partipsiIPRm2
Lateral septal nucleusipsiLS1
Lateral septal nucleus dorsolateral partipsiLSDL-0.5
Lateral septal nucleus ventral partipsiLSV-0.5
Lateral septal nucleus ventrolateral partipsiLSvl-0.5
Lateral septal nucleus intermediolateral partipsiLSiL-0.5
Marginal zone of the lateral septal nucleusipsiMzLS3
Posterior septal complexipsiPSC-2
Lateral spinal nucleus C1ipsiLSpC1-0.5
Area X C1ipsiSCL10C1-0.5
Deep dorsal horn C1ipsiDDHC1-0.5
Spinal cord layer 5 C1ipsiSCL5C1-0.5
Lateral spinal nucleus C2ipsiLSpC2-0.5
Area X C2ipsiSCL10C2-0.5
Deep dorsal horn C2ipsiDDHC2-0.5
Spinal cord layer 5 C2ipsiSCL5C2-0.5
Lateral spinal nucleus C3ipsiLSpC3-0.5
Area X C3ipsiSCL10C3-0.5
Deep dorsal horn C3ipsiDDHC3-0.5
Spinal cord layer 5 C3ipsiSCL5C3-0.5
Lateral spinal nucleus C4ipsiLSpC4-0.5
Area X C4ipsiSCL10C4-0.5
Deep dorsal horn C4ipsiDDHC4-0.5
Spinal cord layer 5 C4ipsiSCL5C4-0.5
Lateral spinal nucleus C5ipsiLSpC5-0.5
Area X C5ipsiSCL10C5-0.5
Deep dorsal horn C5ipsiDDHC5-0.5
Spinal cord layer 5 C5ipsiSCL5C5-0.5
Cervical segment 6ipsiCS6-0.5
Lateral spinal nucleus C6ipsiLSpC6-0.5
Area X C6ipsiSCL10C6-0.5
Deep dorsal horn C6ipsiDDHC6-0.5
Spinal cord layer 5 C6ipsiSCL5C6-0.5
Cervical segment 7ipsiCS7-0.5
Lateral spinal nucleus C7ipsiLSpC7-0.5
Area X C7ipsiSCL10C7-0.5
Deep dorsal horn C7ipsiDDHC7-0.5
Spinal cord layer 5 C7ipsiSCL5C7-0.5
Cervical segment 8ipsiCS8-0.5
Lateral spinal nucleus C8ipsiLSpC8-0.5
Area X C8ipsiSCL10C8-0.5
Deep dorsal horn C8ipsiDDHC8-0.5
Spinal cord layer 5 C8ipsiSCL5C8-0.5
Thoracal segment 1ipsiT1-0.5
Lateral spinal nucleus T1ipsiLSpT1-0.5
Area X T1ipsiSCL10T1-0.5
Deep dorsal horn T1ipsiDDHT1-0.5
Spinal cord layer 5 T1ipsiSCL5T1-0.5
Lateral spinal nucleus T2ipsiLSpT2-0.5
Area X T2ipsiSCL10T2-0.5
Deep dorsal horn T2ipsiDDHT2-0.5
Spinal cord layer 5 T2ipsiSCL5T2-0.5
Lateral spinal nucleus T3ipsiLSpT3-0.5
Area X T3ipsiSCL10T3-0.5
Deep dorsal horn T3ipsiDDHT3-0.5
Spinal cord layer 5 T3ipsiSCL5T3-0.5
Lateral spinal nucleus T4ipsiLSpT4-0.5
Area X T4ipsiSCL10T4-0.5
Deep dorsal horn T4ipsiDDHT4-0.5
Spinal cord layer 5 T4ipsiSCL5T4-0.5
Lateral spinal nucleus T5ipsiLSpT5-0.5
Area X T5ipsiSCL10T5-0.5
Deep dorsal horn T5ipsiDDHT5-0.5
Spinal cord layer 5 T5ipsiSCL5T5-0.5
Lateral spinal nucleus T6ipsiLSpT6-0.5
Area X T6ipsiSCL10T6-0.5
Deep dorsal horn T6ipsiDDHT6-0.5
Spinal cord layer 5 T6ipsiSCL5T6-0.5
Lateral spinal nucleus T7ipsiLSpT7-0.5
Area X T7ipsiSCL10T7-0.5
Deep dorsal horn T7ipsiDDHT7-0.5
Spinal cord layer 5 T7ipsiSCL5T7-0.5
Lateral spinal nucleus T8ipsiLSpT8-0.5
Area X T8ipsiSCL10T8-0.5
Deep dorsal horn T8ipsiDDHT8-0.5
Spinal cord layer 5 T8ipsiSCL5T8-0.5
Lateral spinal nucleus T9ipsiLSpT9-0.5
Area X T9ipsiSCL10T9-0.5
Deep dorsal horn T9ipsiDDHT9-0.5
Spinal cord layer 5 T9ipsiSCL5T9-0.5
Lateral spinal nucleus T10ipsiLSpT10-0.5
Area X T10ipsiSCL10T10-0.5
Deep dorsal horn T10ipsiDDHT10-0.5
Spinal cord layer 5 T10ipsiSCL5T10-0.5
Lateral spinal nucleus T11ipsiLSpT11-0.5
Area X T11ipsiSCL10T11-0.5
Deep dorsal horn T11ipsiDDHT11-0.5
Spinal cord layer 5 T11ipsiSCL5T11-0.5
Lateral spinal nucleus T12ipsiLSpT12-0.5
Area X T12ipsiSCL10T12-0.5
Deep dorsal horn T12ipsiDDHT12-0.5
Spinal cord layer 5 T12ipsiSCL5T12-0.5
Lateral spinal nucleus T13ipsiLSpT13-0.5
Area X T13ipsiSCL10T13-0.5
Deep dorsal horn T13ipsiDDHT13-0.5
Spinal cord layer 5 T13ipsiSCL5T13-0.5
Lateral spinal nucleus L1ipsiLSpL1-0.5
Area X L1ipsiSCL10L1-0.5
Deep dorsal horn L1ipsiDDHL1-0.5
Spinal cord layer 5 L1ipsiSCL5L1-0.5
Lateral spinal nucleus L2ipsiLSpL2-0.5
Area X L2ipsiSCL10L2-0.5
Deep dorsal horn L2ipsiDDHL2-0.5
Spinal cord layer 5 L2ipsiSCL5L2-0.5
Lateral spinal nucleus L3ipsiLSpL3-0.5
Area X L3ipsiSCL10L3-0.5
Deep dorsal horn L3ipsiDDHL3-0.5
Spinal cord layer 5 L3ipsiSCL5L3-0.5
Lateral spinal nucleus L4ipsiLSpL4-0.5
Area X L4ipsiSCL10L4-0.5
Deep dorsal horn L4ipsiDDHL4-0.5
Spinal cord layer 5 L4ipsiSCL5L4-0.5
Lateral spinal nucleus L5ipsiLSpL5-0.5
Area X L5ipsiSCL10L5-0.5
Deep dorsal horn L5ipsiDDHL5-0.5
Spinal cord layer 5 L5ipsiSCL5L5-0.5
Lateral spinal nucleus L6ipsiLSpL6-0.5
Area X L6ipsiSCL10L6-0.5
Deep dorsal horn L6ipsiDDHL6-0.5
Spinal cord layer 5 L6ipsiSCL5L6-0.5
Lateral spinal nucleus S1ipsiLSpS1-0.5
Area X S1ipsiSCL10S1-0.5
Deep dorsal horn S1ipsiDDHS1-0.5
Spinal cord layer 5 S1ipsiSCL5S1-0.5
Lateral spinal nucleus S2ipsiLSpS2-0.5
Area X S2ipsiSCL10S2-0.5
Deep dorsal horn S2ipsiDDHS2-0.5
Spinal cord layer 5 S2ipsiSCL5S2-0.5
Lateral spinal nucleus S3ipsiLSpS3-0.5
Area X S3ipsiSCL10S3-0.5
Deep dorsal horn S3ipsiDDHS3-0.5
Spinal cord layer 5 S3ipsiSCL5S3-0.5
Lateral spinal nucleus S4ipsiLSpS4-0.5
Area X S4ipsiSCL10S4-0.5
Deep dorsal horn S4ipsiDDHS4-0.5
Spinal cord layer 5 S4ipsiSCL5S4-0.5
Lateral spinal nucleus Co1ipsiLSpCo1-0.5
Deep dorsal horn Co1ipsiDDHCo1-0.5
Lateral spinal nucleus Co2ipsiLSpCo2-0.5
Deep dorsal horn Co2ipsiDDHCo2-0.5
Lateral spinal nucleus Co3ipsiLSpCo3-0.5
Deep dorsal horn Co3ipsiDDHCo3-0.5
Stomach wallipsiOrgsStomWS-0.5
Trachea sideipsiOrgsTras2

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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