University of Rostock

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Rat connectome



Pericoerulear region left


Abbreviation
PCR
Color       
Superior regionsLocus coeruleus

SynonymsAbbr.Language
 periLC 
Peri-locus coeruleus dendritic region  
Pericoerulear regionPCR 
Peri-coerulear regionperi-LC 
Pericoerulear area Eng
Locus coeruleus dendritic region Eng
Perilocus coeruleus region Eng
Locus coeruleus peripheral Eng
Peri-locus coeruleus region Eng

SubregionsSide
Caudal juxtaependymal pericoerulear regionleft
CaudaL pericoerulear regionleft
Rostromedial pericoerulear regionleft
Dorsolateral aspect of the pericoerulear regionleft
Rostrolateral pericoerulear regionleft
Ventrolateral aspect of the pericoerulear regionleft
Ventromedial pericoerulear regionleft

Output to

NameSideAbbr.WeightDetails
Periaqueductal grayipsiPAG-0.5
Ventrolateral periaqueductal grayipsiVLPAG-0.5
Locus coeruleusipsiLC1
Parvicellular reticular nucleusipsiPCRt-0.5
Medial vestibular nucleusipsiMVe-0.5
Dorsal raphe nucleus lateral wingipsiDRlw1
Arcuate nucleusipsiArc0.5
Paraventricular hypothalamic nucleus parvicellular division dorsal partipsiPaPcD0.5
Paraventricular hypothalamic nucleusipsiPa1
Paraventricular hypothalamic nucleus magnocellular divisionipsiPaMag0.5
Central amygdaloid nucleusipsiCe0.5
Central amygdaloid nucleus lateral divisionipsiCeL0.5
Central amygdaloid nucleus medial divisionipsiCeM0.5
Accumbens nucleus coreipsiAcbC-0.5
Locus coeruleuscontraLC1
Arcuate nucleuscontraArc0.5

Input from

NameSideAbbr.WeightDetails
Periaqueductal grayipsiPAG-0.5
Dorsal periaqueductal grayipsiDPAG3
Dorsolateral periaqueductal grayipsiDLPAG3
Dorsomedial periaqueductal grayipsiDMPAG4
Caudal part of the medial periaqueductal grayipsiPAGmc3
Ventral periaqueductal grayipsiVPAG1
Ventrolateral periaqueductal grayipsiVLPAG4
Laterodorsal tegmental nucleusipsiLDTg1
A5 noradrenaline cellsipsiA51
Barringtons nucleusipsiBar-1
Locus coeruleusipsiLC0.5
Prepositus nucleusipsiPr-0.5
Caudoventrolateral reticular nucleusipsiCVLR2
Mesencephalic reticular formationipsiMRF4
Pontine reticular nucleusipsiPRN2
Koelliker Fuse nucleusipsiKF4
Lateral parabrachial nucleusipsiLPB4
Parvicellular reticular nucleusipsiPCRt1
Vestibular nucleiipsiVnc2
Nucleus of the solitary tractipsiSol-0.5
Nucleus of the solitary tract caudal partipsiSolca1
Nucleus of the solitary tract rostral partipsiSolro2
Dorsal raphe nucleusipsiDR3
Median raphe nucleusipsiMnR2
Pontine raphe nucleusipsiPnR2
Raphe magnus nucleusipsiRMg1
Dorsomedial rostral medulla oblongataipsiMeObdmr4
Paragigantocellular reticular nucleusipsiPGi-0.5
Lateral paragigantocellular nucleusipsiLPGi4
Substantia innominataipsiSI2
Lateral preoptic areaipsiLPO2
Medial preoptic areaipsiMPA3
Medial preoptic area dorsolateral partipsiMPADL3
Medial preoptic nucleusipsiMPO1
Tuberomammillary nucleusipsiTuM0.5
Preoptic anterior regionipsiPAreg4
Lateral hypothalamic areaipsiLH4
Dorsal hypothalamic areaipsiDA4
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM2
Posterior hypothalamic areaipsiPHA2
Ventromedial hypothalamic nucleusipsiVMH0.5
Arcuate nucleusipsiArc0.5
Paraventricular hypothalamic nucleusipsiPa1
Perifornical nucleusipsiPeF3
Lateral habenular nucleusipsiLHb0.5
Amygdaloid complexipsiAC-0.5
Bed nucleus of the stria terminalisipsiBST3
Bed nucleus of the stria terminalis lateral divisionipsiBSTL3
Bed nucleus of the stria terminalis medial divisionipsiBSTM3
Bed nucleus of the stria terminalis ventral tipipsiBNSTvt3
Central amygdaloid nucleusipsiCe3
ClaustrumipsiCl2
Infralimbic cortexipsiIL3
Frontal association cortexipsiFrA2
Insular cortexipsiICX0.5
Dorsal periaqueductal graycontraDPAG1
Dorsolateral periaqueductal graycontraDLPAG1
Caudal part of the medial periaqueductal graycontraPAGmc1
Ventral periaqueductal graycontraVPAG0.5
Ventrolateral periaqueductal graycontraVLPAG1
Dorsal raphe nucleuscontraDR-0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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