University of Rostock
Department of Anatomy
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Rat connectome
Anterior striatum right
Abbreviation
AStri
Color
Superior regions
Caudate putamen
Synonyms
Abbr.
Language
Anterior striatum
AStri
Caudate putamen anterior part
Eng
Striatum at coronal levels
Eng
Subregions
Side
Anterior core region of the caudate putamen
right
Dorsolateral part of the anterior striatum
right
Anteriorposterior part of caudate putamen
right
Anterodorsal part of the caudate putamen
right
Anteromedial striatum
right
Anteroventral segment of the striatum
right
Caudate putamen anteromedian
right
Output to
Name
Side
Abbr.
Weight
Details
Substantia nigra A9
ipsi
SN
3
Substantia nigra compact part
ipsi
SNC
2.5
Substantia nigra reticular part
ipsi
SNR
2.5
Ventral tegmental area A10
ipsi
VTA
0.5
Amygdaloid complex
ipsi
AC
1
Medial globus pallidus
ipsi
MGP
3
Middle cingulate cortex
ipsi
MCC
-0.5
Posterior cingulate cortex
ipsi
PCC
-0.5
Input from
Name
Side
Abbr.
Weight
Details
Lateral agranular prefrontal cortex layer 5
contra
AGlL5
-0.5
Lateral agranular prefrontal cortex layer 5a
contra
AGlL5a
-0.5
Substantia nigra A9
ipsi
SN
3
Substantia nigra caudolateral part
ipsi
SNcL
-0.5
Substantia nigra compact part
ipsi
SNC
3
Substantia nigra compact part medial tier
ipsi
SNCM
4
Substantia nigra reticular part
ipsi
SNR
3
Substantia nigra reticular part medial tier
ipsi
SNRm
0.5
Ventral tegmental area A10
ipsi
VTA
2
Ventral tegmental area A10 ventral part
ipsi
VTAv
2
Mesencephalic reticular formation
ipsi
MRF
-0.5
Central medial thalamic nucleus
ipsi
CM
2
Central medial thalamic nucleus caudal part
ipsi
CMca
0.5
Centrolateral thalamic nucleus
ipsi
CL
2
Paracentral thalamic nucleus
ipsi
PC
2
Parafascicular thalamic nucleus
ipsi
PF
0
Paratenial thalamic nucleus
ipsi
PT
3
Amygdaloid complex
ipsi
AC
1
Medial globus pallidus
ipsi
MGP
3
Entorhinal cortex
ipsi
Ent
1
Prelimbic cortex deep layers
ipsi
PrLDL
-2
Infralimbic cortex deep layers
ipsi
ILDL
-2
Frontal association cortex
ipsi
FrA
-0.5
Agranular insular cortex dorsal part deep layers
ipsi
AIDdL
-2
Agranular insular cortex posterior deep layers
ipsi
AIPdL
-2
Dorsal peduncular cortex deep layers
ipsi
DPdL
-2
Lateral agranular prefrontal cortex layer 5
ipsi
AGlL5
3
Lateral agranular prefrontal cortex layer 5a
ipsi
AGlL5a
3
Primary somatosensory cortex layer 5
ipsi
S1L5
3
Primary somatosensory cortex layer 5 a
ipsi
S1L5a
3
Somatosensory cortex layer 5b
ipsi
SRL5b
1
Lateral orbital cortex deep layers
ipsi
LOLad
1
Medial orbital cortex deep layers
ipsi
MOcxdL
-2
Ventrolateral orbital area deep layers
ipsi
VLOd
-2
Key for weights
Value
Weight
-3
unknown
-2
fibers of passage
-1
not clear
-0.5
exists
0
not present
0.5
very light
1
light / sparse
1.5
light / moderate
2
moderate / dense
2.5
moderate / strong
3
strong
4
very strong
Homepage
|
Staff
|
neuroVIISAS
|
Rat connectome
|
Other connectomes
|
Neuroimaging
|
Neurodegeneration
|
Students
|
Links
|
Publications