University of Rostock

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Rat connectome



Field CA2 of hippocampus layer stratum pyramidale right


Abbreviation
CA2pyr
Color       
Superior regionsField CA2 of hippocampus layers

SynonymsAbbr.Language
Field CA2 of hippocampus layer stratum pyramidaleCA2pyr 
Field CA2 of hippocampus layer stratum pyramidaleCA2L3sp 
 CA2spEng

SubregionsSide
Field CA2 of hippocampus layer stratum pyramidale deep partright
Field CA2 of hippocampus layer stratum pyramidale superficial partright
Field CA2 of hippocampus layer stratum pyramidale pyramidal cellsright

Output to

NameSideAbbr.WeightDetails
Field CA1 of hippocampuscontraCA13
Field CA3 of hippocampus layer stratum radiatumcontraCA3rad-0.5
Field CA3 of hippocampus layer stratum pyramidalecontraCA3pyr-0.5
Field CA3 of hippocampus layer stratum orienscontraCA3or-0.5
Septal regioncontraSER-0.5
Lateral septal nucleus dorsal partcontraLSD-0.5
Juxtaparaventricular part caudal [Lateral hypothalamic area [Preoptic anterior region]]ipsiJPVC0
Juxtaparaventricular part rostral [Lateral hypothalamic area [Preoptic anterior region]]ipsiJPVR1
Lateral hypothalamic area juxtadorsomedial regionipsiJDM0
Accumbens nucleus shellipsiAcbSh1
Hilus of the dentate gyrusipsiHil-0.5
Parasubiculum intermediate partipsiPaSim1
Lateral prefrontal cortexipsilPFC-0.5
Ventral medial prefrontal cortexipsivmPFC-0.5
Septal regionipsiSER-0.5
Lateral septal nucleus dorsal partipsiLSD-0.5

Input from

NameSideAbbr.WeightDetails
Median raphe nucleusipsiMnR1
Diagonal band of BrocaipsiDBB-0.5
Nucleus of the horizontal limb of the diagonal bandipsiHDB-0.5
Nucleus of the vertical limb of the diagonal bandipsiVDB-0.5
Medial septal nucleusipsiMS-0.5
Medial preoptic areaipsiMPA-0.5
Juxtaparaventricular part caudal [Lateral hypothalamic area [Preoptic anterior region]]ipsiJPVC0
Juxtaparaventricular part rostral [Lateral hypothalamic area [Preoptic anterior region]]ipsiJPVR0
Lateral hypothalamic area juxtadorsomedial regionipsiJDM0
Supramammillar nucleus medial partipsiSuMM-0.5
Anterior amygdaloid areaipsiAA-0.5
Field CA2 of hippocampus layer stratum pyramidale primary axon of pyramidal cellsipsiCA2L3spapy-2
Field CA2 of hippocampus layer stratum pyramidale secondary axon of pyramidal cellsipsiCA2L3sapy-0.5
Field CA3 of hippocampusipsiCA3-0.5
Field CA3a of hippocampus pyramidal cell layer primary axon of pyramidal cellsipsiCA3aLpapyc-2
Field CA3a of hippocampus pyramidal cell layer secondary axon of pyramidal cellsipsiCA3aLsapyc-0.5
Entorhinal cortexipsiEnt-0.5
Lateral septal nucleusipsiLS-0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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