University of Rostock

Department of Anatomy

Neuroscience Group

  Homepage

 Staff

 neuroVIISAS

 Rat connectome

 Other connectomes

 Neuroimaging

 Neurodegeneration

 Neuroproteomics

 Students

 Links

 Publications

Rat connectome



Lateral septal nucleus dorsal part left


Abbreviation
LSD
Color       
Superior regionsLateral septal nucleus

SynonymsAbbr.Language
 LSd 
Lateral septum dorsal nucleus  
Dorsal part of lateral septal nucleus  
Lateral septum dorsale Eng
Dorsal division of the lateral septal nucleus Eng
Dorsal lateral septum  
Lateral septum dorsal part Eng
Lateral septal nucleus dorsal partLSDEng
Dorsal portion of the lateral septal complexDLSCEng

SubregionsSide
Lateral septal nucleus dorsal part intermediate divisionleft
Ventricular border of the lateral septal nucleus dorsal partleft
Ventrolateal part of the lateral septal nucleus dorsal partleft
Ventricular zone of the lateral septal nucleus dorsal partleft

Output to

NameSideAbbr.WeightDetails
Anteroposterior extension of the central gray mesencephalic partipsiCGMap1
Between anterior end of dorsal raphe and posterior ventral tegmental nucleus of the central gray mesencephalic partipsiCGMdrvtg1
Periaqueductal grayipsiPAG1
Dorsolateral periaqueductal grayipsiDLPAG1
Lateral periaqueductal grayipsiLPAG1
Periaqueductal gray rostral partipsiPAGR1
Periaqueductal gray rostrolateral partipsiPAGRL-2
Ventrolateral periaqueductal grayipsiVLPAG0
Ventral tegmental area A10ipsiVTA1
Paranigral nucleusipsiPN-2
Adjacent parts of the ventral tegmental areaipsiVeMTap-0.5
Paraflocculus ventral partipsiPFlv1
FlocculusipsiFl1
Nucleus incertusipsiNI1
Median raphe nucleusipsiMnR0
Magnocellular basal forebrain neuronal complexipsiMBFNC0.5
Diagonal band of BrocaipsiDBB-0.5
Diagonal band of Broca rostral partipsiDBBR2.5
Nucleus of the diagonal band of Broca dorsal partipsiVDBD-0.5
Angular part of the ventral diagonal bandipsiVDBVA3
Ventrolateral part of the ventral diagonal bandipsiVDBVVL2
Nucleus of the horizontal limb of the diagonal bandipsiHDB0
Nucleus of the horizontal limb of the diagonal band medial partipsiHDBm2
Nucleus of the vertical limb of the diagonal bandipsiVDB0
Lateral portion of the diagonal band of BrocaipsiLDBB-0.5
Deep regions of the diagonal band of BrocaipsiDBBd-0.5
Diagonal band of Broca medial partipsiDBBm-0.5
Mid diagonal band of BrocaipsiDBBmid4
Mid diagonal band of Broca lateral partipsiDBBmidL3
Mid diagonal band of Broca medial partipsiDBBmidM3
Diagonal band of Broca caudal partipsiDBBC2
Diagonal band of Broca caudal medial ipsiDBBCM1
Diagonal band of Broca middle portionipsiDBBmip1
Medial septal nucleusipsiMS1
Medial septal nucleus caudal partipsiMSc1
Medial septal nucleus lateral partipsiMSLa1
Medial septal nucleus medial partipsiMSm-0.5
Medial septal nucleus rostral partipsiMSR1
Medial septal nucleus midline partipsiMSmi1
Substantia innominataipsiSI-0.5
Lateral preoptic areaipsiLPO3
Medial preoptic areaipsiMPA-2
Anterodorsal preoptic nucleusipsiADP1
Medial preoptic nucleusipsiMPO3
Dorsomedial hypothalamic nucleusipsiDMHy0
Lateral zoneipsiLHA-2
Lateral hypothalamic areaipsiLH4
Lateral hypothalamic area anterior partipsiLHAa0
Lateral hypothalamic area medial partipsiLHAm2
Lateral hypothalamic area perifornical partipsiPFx2.5
Lateral hypothalamic area posterior partipsiLHAp0
Ventral regions of the lateral hypothalamic area rostral partipsiLHroV-0.5
Lateral regions of the lateral hypothalamic area rostral partipsiLHroL-0.5
Lateral hypothalamic nucleusipsiLHN-2
Tuberal region of lateral hypothalamusipsiTuLH1
Lateroanterior hypothalamic nucleusipsiLAH-2
Ventrolateral hypothalamic nucleusipsiVLH-2
Lateral hypothalamic area at the level of the caudal half to the ventromedial hypothalamic nucleusipsiLHAaCVMH3
Medial zoneipsiMHA2
Anterior hypothalamic areaipsiAHA-0.5
Anterior hypothalamic nucleusipsiAHn1
Dorsomedial hypothalamic nucleus anterior partipsiDMA1
Dorsomedial nucleus posterior partipsiDMHp0
Posterior hypothalamic areaipsiPHA-2
Posterior hypothalamic nucleusipsiPH3
Tuberal areaipsiTA3
Around the ventromedial and dorsomedial hypothalamic areasipsiaVMDM0
Ventromedial hypothalamic nucleusipsiVMH3
Ventromedial hypothalamic nucleus central partipsiVMHC1
Ventromedial hypothalamic nucleus ventrolateral partipsiVMHVL1
Anteroventral periventricular nucleus 2ipsiAVPV21
Arcuate nucleusipsiArc-2
Paraventricular hypothalamic nucleusipsiPa3
Suprachiasmatic nucleusipsiSCh2
Rostral hypothalamusipsiRHYPO0
Lateral mammillary nucleusipsiLM-2
Medial mammillary nucleusipsiMMn-2
Premammillary nucleus dorsal partipsiPMD-2
Premammillary nucleus ventral partipsiPMV3
Supramammillar nucleusipsiSuM-0.5
Supramammillar nucleus lateral partipsiSuML1
Paraventricular thalamic nucleusipsiPV-2
Reuniens thalamic nucleusipsiRe-2
Ventral thalamusipsiVNT-0.5
Reticular thalamic nucleus ventromedial partipsiRtvm-0.5
Zona incertaipsiZI-2
Zona incerta rostromedial partipsiZIrm-0.5
Tuber cinereum areaipsiTC0
HabenulaipsiHAB0
Medial habenular nucleusipsiMHb1
Medial forebrain bundleipsimfb-0.5
Stria medullaris of the thalamusipsism-2
Bed nucleus of the stria terminalis lateral divisionipsiBSTL-2
Bed nucleus of the stria terminalis medial divisionipsiBSTM-2
Central amygdaloid nucleusipsiCe-0.5
Medial amygdaloid nucleusipsiMe-2
Ventral pallidumipsiVP-2
Accumbens nucleusipsiAc-2
Accumbens nucleus coreipsiAcbC3
Accumbens nucleus shellipsiAcbSh1
Dorsomedial shellipsiAcbShdm-0.5
Medial accumbens shellipsiAcbShm3
Fundus of the striatumipsiFS-0.5
HippocampusipsiHIPP1
Dorsal hippocampusipsiHIPPd-0.5
Dentate gyrusipsiDG1
Middle cingulate cortexipsiMCC-0.5
Precommissural nucleusipsiPrC-2
Interpeduncular nucleusipsiIP0
Lateral septal nucleus dorsal partipsiLSD-1
Lateral septal nucleus intermediate partipsiLSI-0.5
Lateral septal nucleus intermediate part ventral subdivisionipsiLSVIV1
Lateral septal nucleus ventral partipsiLSV4
Paralambdoid septal nucleusipsiPLd-2
Septofimbrial nucleusipsiSFi-0.5
Anteroposterior extension of the central gray mesencephalic partcontraCGMap1
Between anterior end of dorsal raphe and posterior ventral tegmental nucleus of the central gray mesencephalic partcontraCGMdrvtg1
Dorsolateral periaqueductal graycontraDLPAG0
Lateral periaqueductal graycontraLPAG1
Periaqueductal gray rostral partcontraPAGR-2
Ventrolateral periaqueductal graycontraVLPAG0
Median raphe nucleuscontraMnR0
Diagonal band of BrocacontraDBB0
Angular part of the ventral diagonal bandcontraVDBVA1
Ventrolateral part of the ventral diagonal bandcontraVDBVVL1
Nucleus of the horizontal limb of the diagonal band medial partcontraHDBm1
Medial septal nucleus lateral partcontraMSLa0.5
Anterior hypothalamic areacontraAHA-2
Dorsomedial hypothalamic nucleus anterior partcontraDMA0
Dorsomedial nucleus posterior partcontraDMHp0
Posterior hypothalamic nucleuscontraPH2
Ventromedial hypothalamic nucleuscontraVMH0
Accumbens nucleus shellcontraAcbSh-0.5
Dorsomedial shellcontraAcbShdm-0.5
Lateral septal nucleus ventral partcontraLSV0

Input from

NameSideAbbr.WeightDetails
Ventrolateral periaqueductal grayipsiVLPAG-0.5
Ventral tegmental area A10ipsiVTA3
Retrorubral nucleusipsiRR1
Laterodorsal tegmental nucleusipsiLDTg2
Pedunculopontine tegmental nucleus pars compactaipsiPPNC2
Locus coeruleusipsiLC-1
Pontine tegmental fieldipsiPTF0.5
Parabrachial nucleusipsiPB1
Dorsal raphe nucleusipsiDR-0.5
Dorsal raphe nucleus dorsal partipsiDRD1
Dorsal raphe nucleus rostral partipsiDRr1
Dorsal raphe nucleus ventral partipsiDRV1
Median raphe nucleusipsiMnR3
Intermediate hypothalamic cell groupsipsiIHCG1
Lateral preoptic areaipsiLPO-1
Medial preoptic areaipsiMPA3
Medial preoptic area dorsolateral partipsiMPADL3
Medial preoptic nucleusipsiMPO3
HypothalamusipsiHYPO-2
Dorsomedial hypothalamic nucleusipsiDMHy1
Lateral zoneipsiLHA3
Lateral hypothalamic areaipsiLH3
Lateral hypothalamic area anteriorposterior partipsiLHapo1
Lateral hypothalamic area perifornical partipsiPFx3
Anterior hypothalamic areaipsiAHA1
Anteroventral periventricular nucleus [Anterior hypothalamic area]ipsiAVPe3
Dorsal hypothalamic areaipsiDA1
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM3
Dorsomedial hypothalamic nucleus dorsomedial partipsiDMDM3
Posterior hypothalamic nucleus caudal partipsiPHCa2
Posterior hypothalamic nucleus rostral partipsiPHRo3
Ventromedial hypothalamic nucleusipsiVMH1
Ventromedial hypothalamic nucleus central partipsiVMHC0
Ventromedial hypothalamic nucleus dorsomedial partipsiVMHDM0.5
Ventromedial hypothalamic nucleus ventrolateral partipsiVMHVL0
Paraventricular hypothalamic nucleus anterior parvicellular part [Periventricular zone anterior region]ipsiPaAP-0.5
Ventral part of the paraventricular hypothalamic nucleus anterior parvicellular part [Periventricular zone anterior region]ipsivPaAP-0.5
Adjacent to the ventral part of the paraventricular hypothalamic nucleus anterior parvicellular part [Periventricular zone anterior region]ipsiPaAPav-0.5
Paraventricular hypothalamic nucleusipsiPa1
Anterior part of periventricular parvocellular subdivision of paraventricular hypothalamic nucleusipsiPVPapvA-0.5
Supramammillar nucleus lateral partipsiSuML3
Supramammillar nucleus lateral part lateral subpartipsiSuMLL3
Supramammillar nucleus lateral part medial subpartipsiSuMLM3
Supramammillar nucleus medial partipsiSuMM3
Perifornical nucleusipsiPeF3
Subparafascicular thalamic nucleusipsiSPF0
Subparafascicular thalamic nucleus rostral partipsiSPFr0
Bed nucleus of the stria terminalis principal nucleusipsiBSTpr3
Amygdalopiriform transition areaipsiAPir-1
Amygdalopiriform transition area posteromedial partipsiAPir_PM-1
Posterolateral cortical nucleusipsiPLCo1
Medial amygdaloid nucleusipsiMe1
Medial amygdaloid nucleus anterodorsal partipsiMeAD1
Amygdalostriatal transition area intermediolateral partipsiAPirIML-1
Hilus of the dentate gyrusipsiHil0.5
Stratum oriens of the hilusipsiHilso-0.5
Stratum radiatum of the hilusipsiHilsr-0.5
Ammon hornipsiAmH-1
Field CA1 of hippocampusipsiCA1-0.5
Field CA1 of hippocampus layer stratum pyramidaleipsiCA1pyr-0.5
Field CA1 of hippocampus layer stratum oriensipsiCA1or-0.5
Field CA1 of hippocampus ventral layer stratum pyramidal cellsipsiCA1vL3spc-0.5
Portion of CA1 located adjacent to the ventral subiculumipsiCA1sv-0.5
Field CA1 of hippocampus septal partipsiCA1sep3
Field CA1 of hippocampus septal poleipsiCA1sp1
Field CA2 of hippocampusipsiCA22
Field CA2 of hippocampus layer stratum pyramidaleipsiCA2pyr-0.5
Field CA2 of hippocampus layer stratum oriensipsiCA2or-0.5
Field CA2 of hippocampus septal partipsiCA2s-0.5
Septal part of the field CA3 of hippocampusipsiSCA3-0.5
Rostro dorsal part of the ammon's hornipsiAmHRD-0.5
SubiculumipsiS-0.5
Subiculum dorsal partipsiSd0
Subiculum dorsal proximal partipsiSdp1
Subiculum ventral distal partipsiSvd0
Subiculum ventral proximal partipsiSvp-0.5
Infralimbic cortexipsiIL2
Lateral septal nucleus dorsal partipsiLSD-1
Ventral tegmental area A10contraVTA0
Intermediate hypothalamic cell groupscontraIHCG-0.5
Dorsomedial hypothalamic nucleuscontraDMHy-0.5
Lateral zonecontraLHA-0.5
Anterior hypothalamic areacontraAHA-0.5
Dorsal hypothalamic areacontraDA-0.5
Ventromedial hypothalamic nucleuscontraVMH-0.5
Ventromedial hypothalamic nucleus central partcontraVMHC0
Ventromedial hypothalamic nucleus dorsomedial partcontraVMHDM1
Ventromedial hypothalamic nucleus ventrolateral partcontraVMHVL0
Paraventricular hypothalamic nucleus anterior parvicellular part [Periventricular zone anterior region]contraPaAP-0.5
Ventral part of the paraventricular hypothalamic nucleus anterior parvicellular part [Periventricular zone anterior region]contravPaAP-0.5
Adjacent to the ventral part of the paraventricular hypothalamic nucleus anterior parvicellular part [Periventricular zone anterior region]contraPaAPav-0.5
Paraventricular hypothalamic nucleuscontraPa-0.5
Anterior part of periventricular parvocellular subdivision of paraventricular hypothalamic nucleuscontraPVPapvA-0.5
Perifornical nucleuscontraPeF-0.5
Hilus of the dentate gyruscontraHil0.5
Stratum oriens of the hiluscontraHilso-0.5
Stratum radiatum of the hiluscontraHilsr-0.5
Field CA2 of hippocampuscontraCA22
Field CA2 of hippocampus layer stratum pyramidalecontraCA2pyr-0.5
Field CA2 of hippocampus layer stratum orienscontraCA2or-0.5
Field CA2 of hippocampus septal partcontraCA2s-0.5
Septal part of the field CA3 of hippocampuscontraSCA3-0.5
ClitorisipsiOrgCLi1
VaginaipsiOrgVag1

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





Homepage | Staff | neuroVIISAS | Rat connectome | Other connectomes | Neuroimaging | Neurodegeneration | Students | Links | Publications