University of Rostock

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Rat connectome



Median eminence middle portion subependymal layer left


Abbreviation
MEmise
Color       
Superior regionsMedian eminence middle portion

SynonymsAbbr.Language
Median eminence middle portion subependymal layerMEmiseEng

Output to

NameSideAbbr.WeightDetails
Periaqueductal grayipsiPAG1
Barringtons nucleusipsiBar0
Locus coeruleusipsiLC0
Prepositus nucleusipsiPr0
Parabrachial nucleus caudal partipsiPBca2
Parabrachial nucleus rostral partipsiPBro2
Area postremaipsiAP0.5
Nucleus of the solitary tractipsiSol3
Dorsal motor nucleus of vagusipsi100
Dorsal endopiriform nucleusipsiDEn0
Medial preoptic nucleus lateral partipsiMPOL1
Ventrolateral preoptic nucleusipsiVLPO0.5
Ventromedial preoptic nucleusipsiVMPO3
Dorsal tuberomammillary nucleusipsiDTM2
Ventral tuberomammillary nucleusipsiVTM1
Vascular organ of the lamina terminalisipsiVOLT1
Dorsomedial hypothalamic nucleusipsiDMHy1
Lateral hypothalamic areaipsiLH0
Ventromedial hypothalamic nucleusipsiVMH0
Anteroventral periventricular nucleus 2ipsiAVPV21
Arcuate nucleus ventrolateral partipsiArcVL1
Arcuate nucleus ventromedial partipsiArcVM-0.5
Arcuate nucleus dorsomedial partipsiArcdm1
Paraventricular hypothalamic nucleusipsiPa1
Paraventricular nucleus posterior partipsiPaPos0
Subparaventricular hypothalamic nucleusipsiSubPa0
Periventricular hypothalamic nucleusipsiPe1
Suprachiasmatic nucleusipsiSCh2
Nucleus properipsiSOnP2
Premammillary nucleus ventral partipsiPMV1
Retrochiasmatic areaipsiRCh2
Subfornical organipsiSFO1
Tuber cinereum areaipsiTC1
Amygdaloid complexipsiAC0
Bed nucleus of the stria terminalisipsiBST0
ClaustrumipsiCl0
Accumbens nucleusipsiAc0
Intergeniculate leafipsiIGL1
Lateral septal nucleus ventral partipsiLSV0
Arcuate nucleus ventromedial partcontraArcVM-0.5

Input from

NameSideAbbr.WeightDetails
Periaqueductal grayipsiPAG1
Barringtons nucleusipsiBar1
Locus coeruleusipsiLC1
Prepositus nucleusipsiPr1
Parabrachial nucleus caudal partipsiPBca2
Parabrachial nucleus rostral partipsiPBro2
Area postremaipsiAP0.5
Nucleus of the solitary tractipsiSol2
Dorsal motor nucleus of vagusipsi101
Dorsal endopiriform nucleusipsiDEn1
Diagonal band of BrocaipsiDBB1
Medial septal nucleusipsiMS1
Medial preoptic areaipsiMPA1
Medial preoptic nucleus lateral partipsiMPOL2
Ventrolateral preoptic nucleusipsiVLPO0
Ventromedial preoptic nucleusipsiVMPO1
Dorsal tuberomammillary nucleusipsiDTM0
Ventral tuberomammillary nucleusipsiVTM1
Vascular organ of the lamina terminalisipsiVOLT1
Dorsomedial hypothalamic nucleusipsiDMHy2
Lateral hypothalamic areaipsiLH0
Posterior hypothalamic areaipsiPHA0
Ventromedial hypothalamic nucleusipsiVMH1
Anteroventral periventricular nucleus 2ipsiAVPV21
Arcuate nucleusipsiArc3
Arcuate nucleus ventrolateral partipsiArcVL1
Arcuate nucleus dorsomedial partipsiArcdm2
Paraventricular hypothalamic nucleus medial parvicellular part [Periventricular zone anterior region]ipsiPaMP-0.5
Paraventricular hypothalamic nucleus anterior parvicellular part [Periventricular zone anterior region]ipsiPaAP-0.5
Paraventricular hypothalamic nucleusipsiPa3
Paraventricular hypothalamic nucleus magnocellular divisionipsiPaMag-0.5
Paraventricular hypothalamic nucleus parvocellular divisionipsiPavPo3
Paraventricular nucleus posterior partipsiPaPos1
Subparaventricular hypothalamic nucleusipsiSubPa0
Periventricular hypothalamic nucleusipsiPe1
Caudal periventricular hypothalamic regionipsiPeCa1
Suprachiasmatic nucleusipsiSCh1
Supraoptic nucleus [Supraoptic region]ipsiSO3
Nucleus properipsiSOnP0
Mammillary bodyipsiCMAM0
Premammillary nucleus ventral partipsiPMV2
Retrochiasmatic areaipsiRCh0
Subfornical organipsiSFO2
Zona incertaipsiZI1
Tuber cinereum areaipsiTC0
Amygdaloid complexipsiAC0
Bed nucleus of the stria terminalisipsiBST1
ClaustrumipsiCl1
Accumbens nucleusipsiAc1
Intergeniculate leafipsiIGL0
Lateral septal nucleus ventral partipsiLSV2

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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