University of Rostock

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Rat connectome



Ventral tuberomammillary nucleus left


Abbreviation
VTM
Color       
Superior regionsTuberomammillary nucleus

SynonymsAbbr.Language
Tuberomammillary nucleus ventral partTMvEng
Tuberomammillary nucleus ventral partTMvEng
Ventral subgroup of the tuberomammillary nucleus Eng
Anterior bed nuclei of the medial forebrain bundle Eng
Ventral tuberomammillary nucleusVTMEng
Ventral part of tuberomammillary nucleus Eng
Caudal magnocellular ammmillary nucleus Eng
Nucleus caudalis magnocellularis postmammillaris Eng
Nucleus postmammillaris magnocellularis Eng
Ventral subdivision of the tuberomammillary nucleus Eng

SubregionsSide
Ventral tuberomammillary nucleus dorsal partleft
Ventral tuberomammillary nucleus rostral partleft
Ventral tuberomammillary nucleus ventral partleft
Lateral half of the ventral subdivision of the tuberomammillary nucleusleft
Medial part of the ventral subdivision of the tuberomammillary nucleusleft
Ventral tuberomammillary nucleus coreleft
Dense plexus engulfing the magnocellular neurons of the ventral tuberomammillary nucleusleft

Output to

NameSideAbbr.WeightDetails
Nucleus of DarkschewitschipsiDk0
Oculomotor nucleusipsi32
TectumipsiTEC3
Substantia nigra lateral partipsiSNL-0.5
Substantia nigra medial partipsiSNM-0.5
Ventral tegmental area anterior partipsiVTAA-0.5
Ventral tegmental area posterior partipsiVTAP-0.5
Edinger Westphal nucleusipsiEW3
CerebellumipsiCERE0.5
Cerebellar cortexipsiCERC-0.5
Anterior lobeipsiAnL3
Locus coeruleus caudal partipsiLCca1
Locus coeruleus pars principalisipsiLCpp2
Locus coeruleus rostral partipsiLCRo2
Pons dorsal partipsiPdo1
Pons ventral partipsiPve1
Nucleus of the solitary tractipsiSol-0.5
Dorsal raphe nucleus caudal partipsiDRC0.5
Dorsal raphe nucleus middle lateral wingipsiDRmlw2
Dorsal raphe nucleus middle midline partipsiDRmmip0.5
Dorsal raphe nucleus rostral partipsiDRr1
Dorsal raphe nucleus middle partipsiDRami2
Median eminence middle portion subependymal layeripsiMEmise1
Juxtaparaventricular part caudal [Lateral hypothalamic area [Preoptic anterior region]]ipsiJPVC0
Juxtaparaventricular part rostral [Lateral hypothalamic area [Preoptic anterior region]]ipsiJPVR0
Lateral hypothalamic area juxtadorsomedial regionipsiJDM0.5
Lateral hypothalamic area motor related juxtaventromedial region dorsal zoneipsiLHAjvd0.5
Lateral hypothalamic area motor related juxtaventromedial region ventral zoneipsiLHAjvv0
Lateral hypothalamic area [Lateral zone tuberal level]ipsiLHtu0.5
Arcuate nucleus ventromedial partipsiArcVM1
Paraventricular hypothalamic nucleusipsiPa3
Supraoptic regionipsiSoR1
Supraoptic nucleus [Supraoptic region]ipsiSO3
Supraoptic nucleus tuberal partipsiSOT-0.5
Lateral mammillary nucleusipsiLM-0.5
Intermediate lobe of pituitaryipsiIPit-0.5
Amygdaloid complexipsiAC2
Medial amygdaloid nucleusipsiMe-0.5
Caudate putamenipsiCPu3
HippocampusipsiHIPP1
Dorsal hippocampusipsiHIPPd2
Lateral entorhinal cortexipsiLEnt2
Medial entorhinal cortexipsiMEnt2
Prelimbic cortexipsiPrL2
Infralimbic cortex deep layersipsiILDL-0.5
Frontal association cortexipsiFrA3
Frontal cortex area 2 lateral partipsiFr2L1
Frontal cortex area 2 medial partipsiFr2M1
Parietal association cortexipsiPtA3
Temporal cortexipsiTE3
Perirhinal cortexipsiA352
Lateral agranular prefrontal cortexipsiAGl3
Primary somatosensory cortexipsiS13
Secondary somatosensory cortexipsiS22
Visual regionsipsiVR3
Olfactory bulb A16ipsiMOB1
Olfactory tubercleipsiTuO2
Cervical segment 7ipsiCS70.5
TectumcontraTEC3
Substantia nigra lateral partcontraSNL-0.5
Substantia nigra medial partcontraSNM-0.5
CerebellumcontraCERE0
Cerebellar cortexcontraCERC-0.5
Locus coeruleus caudal partcontraLCca0.5
Locus coeruleus rostral partcontraLCRo0.5
Locus coeruleus pars principaliscontraLCpp0.5
Pons dorsal partcontraPdo1
Pons ventral partcontraPve1
Facial nucleuscontra71
Principal sensory trigeminal nucleuscontraPr51
Nucleus of the solitary tractcontraSol-0.5
Dorsal raphe nucleus middle lateral wingcontraDRmlw0.5
Paraventricular hypothalamic nucleuscontraPa2
Supraoptic regioncontraSoR1
Amygdaloid complexcontraAC2
Caudate putamencontraCPu2
HippocampuscontraHIPP0.5
Dorsal hippocampuscontraHIPPd1
Lateral entorhinal cortexcontraLEnt1
Medial entorhinal cortexcontraMEnt2
Prelimbic cortexcontraPrL1
Frontal association cortexcontraFrA1
Frontal cortex area 2 lateral partcontraFr2L1
Frontal cortex area 2 medial partcontraFr2M1
Parietal association cortexcontraPtA1
Temporal cortexcontraTE1
Perirhinal cortexcontraA351
Lateral agranular prefrontal cortexcontraAGl1
Primary somatosensory cortexcontraS11
Secondary somatosensory cortexcontraS21
Visual regionscontraVR1
Olfactory bulb A16contraMOB0.5
Olfactory tuberclecontraTuO2
Cervical segment 7contraCS70
Stellate ganglionipsiAutoSteG1
Ventral stomach wallipsiOrgsStomVWS-0.5

Input from

NameSideAbbr.WeightDetails
Central grayipsiCG-0.5
Periaqueductal gray pars alphaipsiPAGa-0.5
Substantia nigra A9ipsiSN1
Substantia nigra compact part medial tieripsiSNCM-0.5
Ventral tegmental area A10ipsiVTA1
Ventral tegmental area A10 lateral partipsiVTAL-0.5
Peripeduncular areaipsiPPA2
Tegmental nuclei of GuddenipsiTGAG-0.5
Dorsal tegmental nucleusipsiDTg3
A5 noradrenaline cellsipsiA50
A7 noradrenaline cellsipsiA70
Locus coeruleusipsiLC0.5
Midline of caudal ponsipsiPcami2
Cluster lateral and ventral to the lateral edge of the superior cerebellar peduncleipsiMRFcLV2
Pontine reticular nucleusipsiPRN1
C1 adrenaline cellsipsiC1-0.5
C2 adrenaline cellsipsiC2-0.5
C3 adrenaline cellsipsiC31
Mesencephalic trigeminal nucleusipsiMe52
Nucleus of the solitary tractipsiSol-0.5
Raphe nucleiipsiRAN-0.5
Dorsal raphe nucleusipsiDR3
Dorsal raphe nucleus rostral partipsiDRr3
Median raphe nucleusipsiMnR-0.5
Pontine raphe nucleusipsiPnR1
Raphe magnus nucleusipsiRMg2
B7 cell groupipsiB7CG-0.5
Ventral lateral medulla oblongataipsiMVL-0.5
A1 noradrenergic cellsipsiA1-0.5
A1 noradrenergic cells rostral partipsiA1R-0.5
A2 noradrenergic cellsipsiA2-0.5
Dorsal part of the myelencephalonipsiMYCD-0.5
Ventral myelencephalonipsiMYCV1
Median eminence middle portion subependymal layeripsiMEmise1
Nucleus of the horizontal limb of the diagonal bandipsiHDB-2
Lateral part of the nucleus of the horizontal limb of the diagonal bandipsiLPHDB0
Nucleus of the horizontal limb of the diagonal band intermediate partipsiHDBi0
Nucleus of the horizontal limb of the diagonal band medial partipsiHDBm1
Nucleus of the vertical limb of the diagonal band dorsal partipsiVDBDo3
Nucleus of the vertical limb of the diagonal band ventral partipsiVDBve3
Medial septal nucleusipsiMS3
Substantia innominataipsiSI-2
Lateral preoptic areaipsiLPO-2
Medial preoptic areaipsiMPA3
Medial preoptic nucleusipsiMPO3
Ventrolateral preoptic nucleusipsiVLPO3
Caudal part of the ventrolateral preoptic nucleusipsiVLPOC3
Rostral part of the ventrolateral preoptic nucleusipsiVLPOr1.5
Midcaudal part of the ventrolateral preoptic nucleusipsiVLPOmc2
Dorsal part of the ventrolateral preoptic nucleusipsiVLPOd0.5
Ventromedial preoptic nucleusipsiVMPO-0.5
Dorsolateral preoptic regionipsiPREOdL-0.5
Dorsomedial hypothalamic nucleusipsiDMHy1
Juxtaparaventricular part caudal [Lateral hypothalamic area [Preoptic anterior region]]ipsiJPVC0
Juxtaparaventricular part rostral [Lateral hypothalamic area [Preoptic anterior region]]ipsiJPVR0
Lateral hypothalamic areaipsiLH2
Lateral hypothalamic area juxtadorsomedial regionipsiJDM0
Lateral hypothalamic area lateral partipsiLHAL2
Lateral hypothalamic area medial partipsiLHAm2
Lateral hypothalamic area motor related juxtaventromedial region dorsal zoneipsiLHAjvd0
Lateral hypothalamic area motor related juxtaventromedial region ventral zoneipsiLHAjvv0
Lateral hypothalamic area perifornical partipsiPFx2
Central lateral nucleus of the hypothalamusipsiCLLH3
Anterior hypothalamic nucleus ventromedial partipsiAHAvm1
Anteroventral periventricular nucleus [Anterior hypothalamic area]ipsiAVPe3
Dorsal hypothalamic areaipsiDA2
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM2
Dorsomedial hypothalamic nucleus dorsomedial partipsiDMDM2
Posterior hypothalamic areaipsiPHA2
Subparaventricular zoneipsiSuPZ-0.5
Subparaventricular zone ventral partipsiSuPZv1
Arcuate nucleusipsiArc3
Arcuate nucleus ventromedial partipsiArcVM1
Paraventricular hypothalamic nucleus anterior parvicellular part [Periventricular zone anterior region]ipsiPaAP-0.5
Ventral part of the paraventricular hypothalamic nucleus anterior parvicellular part [Periventricular zone anterior region]ipsivPaAP-0.5
Adjacent to the ventral part of the paraventricular hypothalamic nucleus anterior parvicellular part [Periventricular zone anterior region]ipsiPaAPav-0.5
Paraventricular hypothalamic nucleusipsiPa1
Anterior part of periventricular parvocellular subdivision of paraventricular hypothalamic nucleusipsiPVPapvA-0.5
Subparaventricular zone of the hypothalamus perisuprachiasmatic regionipsiSBPVps1
Suprachiasmatic nucleus dorsomedial partipsiSCnDM1
Suprachiasmatic nucleus ventrolateral partipsiSCnVL1
Incerto hypothalamic areaipsiicHYPO1
A8 dopamine cells retrorubral groupipsiRRF0
Perifornical nucleusipsiPeF-0.5
Retrochiasmatic areaipsiRCh1
Zona incertaipsiZI3
Bed nucleus of the stria terminalisipsiBST-2
Bed nucleus of the stria terminalis anterior division dorsomedial nucleusipsiBSTdm1
Bed nucleus of the stria terminalis anterior medial partipsiBSTAM1
Bed nucleus of the stria terminalis anterior ventral areaipsiBSTAV1
Bed nucleus of the stria terminalis caudal partipsiBSTCa-2
Field CA1 of hippocampus ventral poleipsiCA1vp1
Subiculum ventral partipsiSv2
Subiculum ventral distal partipsiSvd1
Infralimbic areaipsiiLA3
Infralimbic cortex deep layersipsiILDL2
Lateral septal nucleusipsiLS3
Septofimbrial nucleusipsiSFi-0.5
Triangular septal nucleusipsiTS0
Caudolateral septumipsiSERcL-2
Substantia nigra A9contraSN-0.5
Peripeduncular areacontraPPA-0.5
Pontine reticular nucleuscontraPRN-0.5
C2 adrenaline cellscontraC2-0.5
Dorsal raphe nucleuscontraDR0.5
A2 noradrenergic cellscontraA2-0.5
Medial septal nucleuscontraMS3
Medial preoptic areacontraMPA-0.5
Dorsomedial hypothalamic nucleuscontraDMHy1
Lateral hypothalamic area lateral partcontraLHAL1
Lateral hypothalamic area medial partcontraLHAm1
Central lateral nucleus of the hypothalamuscontraCLLH2
Dorsal hypothalamic areacontraDA1
Arcuate nucleuscontraArc2
Paraventricular hypothalamic nucleus anterior parvicellular part [Periventricular zone anterior region]contraPaAP-0.5
Ventral part of the paraventricular hypothalamic nucleus anterior parvicellular part [Periventricular zone anterior region]contravPaAP-0.5
Adjacent to the ventral part of the paraventricular hypothalamic nucleus anterior parvicellular part [Periventricular zone anterior region]contraPaAPav-0.5
Paraventricular hypothalamic nucleuscontraPa1
Anterior part of periventricular parvocellular subdivision of paraventricular hypothalamic nucleuscontraPVPapvA-0.5
Perifornical nucleuscontraPeF-0.5
Retrochiasmatic areacontraRCh1
Zona incertacontraZI2
Infralimbic cortex deep layerscontraILDL2

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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