University of Rostock

Department of Anatomy

Neuroscience Group

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Rat connectome



Nucleus proper left


Abbreviation
SOnP
Color       
Superior regionsSupraoptic nucleus [Supraoptic region]

SynonymsAbbr.Language
Nucleus properSOnPEng
Supraoptic nucleus area Eng
Supraoptic nucleus proper  

SubregionsSide
Nucleus proper rostral partleft

Output to

NameSideAbbr.WeightDetails
Periaqueductal gray rostrolateral partipsiPAGRL3
Median eminence middle portion subependymal layeripsiMEmise0
Arcuate nucleus ventromedial partipsiArcVM0
Arcuate nucleus caudal halfipsiArcch-0.5
Paraventricular hypothalamic nucleus medial parvocellular partipsiMPPa1
Posterior lobe of pituitaryipsiPPit-0.5
Vitreous humor of eyeipsiOrgVHEye3

Input from

NameSideAbbr.WeightDetails
Central grayipsiCG-0.5
Central gray pons partipsiCGP1
Superior colliculus intermediate layersipsiSCi-0.5
Middle third of the intermediate layer of the superior colliculusipsiSCimt2
Superior colliculus deep layersipsiSCd-0.5
Middle third of the deep gray layer of the superior colliculusipsiDpGmt2
Superior colliculus deep layers rostral partipsiSCdr2
Posterodorsal tegmental nucleusipsiPDTg-0.5
Laterodorsal tegmental nucleusipsiLDTg-0.5
Marginal nucleus of the superior cerebellar peduncleipsiMNscp1
Locus coeruleusipsiLC-0.5
Locus coeruleus dorsal partipsiLCD1
Locus coeruleus ventral partipsiLCv3
Lateral parabrachial nucleusipsiLPB-0.5
Lateral reticular nucleusipsiLRt-0.5
C1 adrenaline cellsipsiC1-0.5
C3 adrenaline cellsipsiC3-10
Nucleus of the solitary tractipsiSol-0.5
Dorsal raphe nucleusipsiDR-0.5
Median raphe nucleusipsiMnR-0.5
B9 serotonin cellsipsiB9-0.5
A1 noradrenergic cellsipsiA1-0.5
Median eminence middle portion subependymal layeripsiMEmise2
Nucleus of the vertical limb of the diagonal bandipsiVDB0
Medial septal nucleusipsiMS3
Dorsal periventricular preoptic regionipsiDPPOR1.5
Parvocellular portion of the periventricular preoptic regionipsiDPaPOR0
Medial preoptic areaipsiMPA3
Medial preoptic nucleus dorsal partipsiMPOD3
Median preoptic nucleusipsiMnPO2
Tuberomammillary nucleusipsiTuM0
Vascular organ of the lamina terminalisipsiVOLT3
Dorsal periventricular nucleus [Anterior hypothalamic area]ipsiDPe0
Dorsomedial hypothalamic nucleus diffuse partipsiDMH3
Ventromedial hypothalamic nucleusipsiVMH4
Anterior periventricular nucleusipsiPeA0
Arcuate nucleusipsiArc0
Arcuate nucleus ventromedial partipsiArcVM2
Paraventricular hypothalamic nucleusipsiPa2
Suprachiasmatic nucleusipsiSCh1
Premammillary nucleus ventral partipsiPMV2
Supramammillar nucleusipsiSuM3
Paraventricular thalamic nucleusipsiPV2
Paraventricular thalamic nucleus rostral partipsiPVr0
Subfornical organipsiSFO-0.5
Lateral habenular nucleusipsiLHb1
Amygdaloid complexipsiAC3
Bed nucleus of the stria terminalisipsiBST2
HippocampusipsiHIPP1
Lateral septal nucleus intermediate partipsiLSI3
Lateral septal nucleus ventral partipsiLSV1
Middle third of the intermediate layer of the superior colliculuscontraSCimt1
Middle third of the deep gray layer of the superior colliculuscontraDpGmt1
Locus coeruleuscontraLC1

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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