University of Rostock

Department of Anatomy

Neuroscience Group

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Rat connectome



Substantia innominata ventral part right


Abbreviation
SIV
Color       
Superior regionsSubstantia innominata

SynonymsAbbr.Language
Substantia innominata ventral partSIVEng
Substantia innominata ventral division  
 SIvEng

SubregionsSide
Anterior part of the ventral region of the substantia innominataright
Posterior part pof the ventral region of the substantia innominataright

Output to

NameSideAbbr.WeightDetails
Nucleus of DarkschewitschipsiDk0
Oculomotor nucleusipsi30
Ventral tegmental area A10ipsiVTA0.5
Laterodorsal tegmental nucleusipsiLDTg-0.5
Edinger Westphal nucleusipsiEW2
Locus coeruleusipsiLC-0.5
Parabrachial nucleusipsiPB-0.5
Dorsal raphe nucleus median partipsiDRM-0.5
Nucleus of the horizontal limb of the diagonal bandipsiHDB1
Nucleus of the vertical limb of the diagonal bandipsiVDB0.5
Substantia innominata dorsal partipsiSID1
Lateral preoptic areaipsiLPO1
Medial preoptic areaipsiMPA2
Lateral hypothalamic areaipsiLH1
Medial division of the hypothalamusipsiMdH3
Anterior hypothalamic areaipsiAHA2
Dorsal hypothalamic areaipsiDA-0.5
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM3
Dorsomedial hypothalamic nucleus medial partipsiDMmp-0.5
Posterior hypothalamic areaipsiPHA-0.5
Ventromedial hypothalamic nucleusipsiVMH0.5
Arcuate nucleusipsiArc1
Paraventricular hypothalamic nucleusipsiPa1
Mediodorsal thalamic nucleus medial partipsiMDM-0.5
Ventromedial thalamic nucleusipsiVM1
Basolateral amygdaloid nucleusipsiBL3
Anterior basomedial nucleusipsiBMA-0.5
Posterior basomedial nucleusipsiBMP2
Lateral amygdaloid nucleusipsiLA0.5
Bed nucleus of the stria terminalis anterior lateral areaipsiBSTAL1
Bed nucleus of the stria terminalis infraamygdaloid divisionipsiBSTiAm-0.5
Bed nucleus of the stria terminalis intermediate divisionipsiBSTI3
Bed nucleus of the stria terminalis intraamygdaloid divisionipsiBSTIA-0.5
Bed nucleus of the stria terminalis lateral divisionipsiBSTL1
Bed nucleus of the stria terminalis medial divisionipsiBSTM3
Central amygdaloid nucleusipsiCe3
Anterior amygdaloid areaipsiAA3
Cortical amygdaloid nucleusipsiCAn-0.5
Posterior amygdaloid nucleusipsiCOAp1
Nucleus of the lateral olfactory tractipsiLOT1
Medial amygdaloid nucleusipsiMe1
Medial amygdaloid nucleus rostral partipsiMeRo2
Amygdalohippocampal areaipsiAHi-0.5
Entorhinal cortexipsiEnt-0.5
Piriform cortexipsiPir-0.5
Infralimbic cortexipsiIL-0.5
Accessory olfactory bulbipsiAOB-0.5
Granule cell layer of the accessory olfactory bulbipsiAOBgl-0.5
Olfactory bulb A16ipsiMOB1
Lateral septal nucleusipsiLS-0.5

Input from

NameSideAbbr.WeightDetails
Parabrachial nucleusipsiPB2
Subcoeruleus nucleusipsiSubC-0.5
Nucleus of the solitary tractipsiSol-0.5
Dorsal endopiriform nucleusipsiDEn1
Lateral preoptic areaipsiLPO1
Medial preoptic areaipsiMPA1
Caudal pole of medial preoptic areaipsiMPAc1
Lateral hypothalamic area [Region of tuber cinereum]ipsiLHTUC1
Lateral hypothalamic areaipsiLH1
Lateral hypothalamic area ventral partipsiLHAvp2
Caudomedial hypothalamusipsiCMdH-0.5
Anterior hypothalamic areaipsiAHA1
Anterior hypothalamic area ventral partipsiAHAve0.5
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM2
Posterior hypothalamic areaipsiPHA1
Ventromedial hypothalamic nucleusipsiVMH1
Arcuate nucleusipsiArc1
Dorsomedial hypothalamic nucleus [Periventricular zone]ipsiDMpz2
Nucleus paraventricularis [Periventricular zone anterior region]ipsiPaPAR1
Paraventricular hypothalamic nucleusipsiPa1
Paraventricular nucleus lateral parvocellular partipsiPaLp2
Paraventricular nucleus medial partipsiPame2
Premammillary nucleusipsiPMAN1
Supramammillar nucleusipsiSuM1
Central medial thalamic nucleusipsiCM1
Rhomboid thalamic nucleusipsiRh1
Midline group of the dorsal thalamusipsiMTN-0.5
Paratenial thalamic nucleusipsiPT1
Reuniens thalamic nucleusipsiRe1
Zona incertaipsiZI1
Tuber cinereum areaipsiTC1
Basolateral amygdaloid nucleusipsiBL1
Basomedial amygdaloid nucleusipsiBM3
Bed nucleus of the stria terminalis intraamygdaloid divisionipsiBSTIA-0.5
Bed nucleus of the stria terminalis lateral divisionipsiBSTL-0.5
Bed nucleus of the stria terminalis medial divisionipsiBSTM1
Bed nucleus of the stria terminalis posterior divisionipsiBSTP1
Central amygdaloid nucleusipsiCe1
Central amygdaloid nucleus medial divisionipsiCeM1
Central amygdaloid nucleus rostral partipsiCerp1
Amygdalopiriform transition areaipsiAPir2
Anterior amygdaloid areaipsiAA3
Anterior cortical amygdaloid nucleusipsiACo3
Posterolateral cortical nucleusipsiPLCo1
Medial amygdaloid nucleusipsiMe3
Medial amygdaloid nucleus caudal halfipsiMeCh1
Posteromedial cortical nucleusipsiPMCo1
Subiculum ventral partipsiSv3
Rostral dorsolateral entorhinal areaipsirDLEA1
Rostral ventrolateral entorhinal areaipsirVLEA1
Piriform cortexipsiPir1
Prelimbic cortexipsiPrL2
Infralimbic cortexipsiIL3
Insular cortexipsiICX1
Agranular insular cortex posterior partipsiAIP1
Agranular insular cortex rostral posterior partipsirAIp1
Agranular insular cortex ventral partipsiAIV1
Perirhinal cortexipsiA35-0.5
Dorsal peduncular cortexipsiDP3
Medial prefrontal cortexipsimPFC-0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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