University of Rostock
Department of Anatomy
Neuroscience Group
Homepage
Staff
neuroVIISAS
Rat connectome
Other connectomes
Neuroimaging
Neurodegeneration
Neuroproteomics
Students
Links
Publications
Rat connectome
Piriform cortex right
Abbreviation
Pir
Color
Superior regions
Allocortex
Synonyms
Abbr.
Language
Pyriform cortex
PIR
Piriform area
PIR
Eng
Piriform cortex
Pir
Eng
PC
Eng
Piriform cortex
Pr1
Eng
Subregions
Side
Anterior piriform cortex
right
Caudal piriform cortex
right
Caudolateral part of the piriform cortex
right
Central piriform cortex
right
Dorsal piriform cortex
right
Dorsal posterior piriform cortex
right
Dorsolateral piriform cortex
right
Lateral piriform cortex
right
Lateromedial extend of the piriform cortex
right
Medial part of the piriform cortex
right
Piriform cortex layers
right
Posterior piriform cortex
right
Postpiriform transition area
right
Prepiriform cortex
right
Rostral piriform cortex
right
Rostrolateral part of the piriform cortex
right
Rostromedial part of the piriform cortex
right
Ventromedial piriform cortex
right
Rostrocaudal piriform cortex
right
Piriform cortex subicular part
right
Area tempestas
right
Output to
Name
Side
Abbr.
Weight
Details
Dorsal cochlear nucleus
contra
DC
-0.5
Endopiriform system
contra
EnN
1
Basal nucleus Meynert
contra
B
0.5
Substantia innominata
contra
SI
3
Tuberomammillary nucleus
contra
TuM
0.5
Posterior region [Lateral division of the hypothalamus]
contra
PReg
0.5
Tuberal region of lateral hypothalamus
contra
TuLH
0.5
Nucleus of the fields of Forel
contra
F
0
Ventral basolateral nucleus
contra
BLV
-0.5
Bed nucleus of the stria terminalis caudal part caudoventral region
contra
BSTCacv
1
Bed nucleus of the stria terminalis caudal part perifornical region
contra
BSTCapf
1
Bed nucleus of the stria terminalis lateral division
contra
BSTL
3
Bed nucleus of the stria terminalis medial division
contra
BSTM
3
Accumbens nucleus
contra
Ac
1
Dorsomedial shell
contra
AcbShdm
-0.5
Lateral nucleus accumbens
contra
Acl
0.5
Dorsomedial striatum
contra
CPudm
0.5
Dorsomedial striatum dorso-caudal part
contra
CPudmdc
1
Dorsomedial striatum rostral part
contra
CPudmr
0
Dorsomedial striatum ventro-caudal part
contra
CPudmvc
1
Dorsolateral striatum central part
contra
CPudlC
0
Dorsolateral striatum dorsal part
contra
CPudlD
0
Dorsolateral striatum ventral part
contra
CPudlV
0
Ventral striatum caudal part
contra
CPuvca
0
Ventral striatum rostral part
contra
CPuvro
2
Piriform cortex
contra
Pir
1
Anterior piriform cortex
contra
APIRC
0.5
Piriform cortex layer 2
contra
PirL2
-0.5
Piriform cortex layer 3
contra
PirL3
-0.5
Anterior cingulate cortex
contra
ACC
-0.5
Agranular insular cortex
contra
AI
3
Agranular insular cortex posterior part
contra
AIP
-0.5
Agranular insular cortex ventral part jaw movement area
contra
AIVjm
-0.5
Anterior medial frontal cortex
contra
AMFC
-0.5
Orbital cortex
contra
OrC
-0.5
Lateral orbital cortex
contra
LO
2
Medial orbital cortex
contra
MO
-0.5
Ventrolateral orbital area posterior part
contra
VLOp
-0.5
Olfactory bulb A16
contra
MOB
1
Olfactory tubercle
contra
TuO
1
Cervical segment 1
contra
CS1
0
Cervical segment 2
contra
CS2
0
Ventral tegmental area A10
ipsi
VTA
-0.5
Paraflocculus ventral part
ipsi
PFlv
-0.5
Cerebellar lobule 9
ipsi
CERL9
1
Cerebellar lobule 10
ipsi
CERL10
1
Flocculus
ipsi
Fl
-0.5
Middle cerebellar peduncle
ipsi
mcp
-2
Superior cerebellar peduncle
ipsi
sucep
0
Dorsal cochlear nucleus
ipsi
DC
-0.5
Nucleus of the solitary tract
ipsi
Sol
3
Endopiriform system
ipsi
EnN
3
Caudal endopiriform region
ipsi
CEn
-0.5
Central endopiriform system
ipsi
CEnN
-0.5
Dorsal endopiriform nucleus
ipsi
DEn
3
Rostral endopiriform region
ipsi
REn
-0.5
Ventral endopiriform nucleus
ipsi
VEn
3
Islands of Calleja lateral part
ipsi
ICjl
0.5
Islands of Calleja posterior part
ipsi
ICjp
0.5
Diagonal band of Broca
ipsi
DBB
0
Nucleus of the horizontal limb of the diagonal band
ipsi
HDB
3
Nucleus of the vertical limb of the diagonal band
ipsi
VDB
1
Basal nucleus Meynert
ipsi
B
3
Substantia innominata
ipsi
SI
3
Substantia innominata anterior part
ipsi
SIA
0
Substantia innominata dorsal part
ipsi
SID
-0.5
Substantia innominata posterior part
ipsi
SIP
2
Substantia innominata ventral part
ipsi
SIV
1
Magnocellular preoptic nucleus
ipsi
MCPO
2
Dorsal tenia tecta
ipsi
DTT
3
Ventral tenia tecta
ipsi
VTT
3
Tuberomammillary nucleus
ipsi
TuM
0.5
Posterior region [Lateral division of the hypothalamus]
ipsi
PReg
0.5
Juxtaparaventricular part caudal [Lateral hypothalamic area [Preoptic anterior region]]
ipsi
JPVC
0.5
Juxtaparaventricular part rostral [Lateral hypothalamic area [Preoptic anterior region]]
ipsi
JPVR
0.5
Lateral hypothalamic area
ipsi
LH
2
Lateral hypothalamic area juxtadorsomedial region
ipsi
JDM
0.5
Lateral hypothalamic area posterior part
ipsi
LHAp
1
Tuberal region of lateral hypothalamus
ipsi
TuLH
0.5
Medial division of the hypothalamus
ipsi
MdH
0.5
Mediobasal hypothalamus posterior part
ipsi
MeHypoP
0.5
Paraventricular hypothalamic nucleus anterior parvicellular subdivision
ipsi
aPavPo
0
Suprachiasmatic nucleus
ipsi
SCh
3
Mediodorsal thalamic nucleus
ipsi
MD
1
Mediodorsal thalamic nucleus central part
ipsi
MDC
1
Mediodorsal thalamic nucleus lateral part
ipsi
MDL
-10
Mediodorsal thalamic nucleus medial part
ipsi
MDM
1
Reuniens thalamic nucleus
ipsi
Re
1
Reticular thalamic nucleus caudal part
ipsi
Rtc
-10
Reticular thalamic nucleus rostral part
ipsi
Rtr
-10
Nucleus of the fields of Forel
ipsi
F
0
Pineal gland
ipsi
Pi
3
Amygdaloid complex
ipsi
AC
1
Basal nucleus
ipsi
Bnc
2
Accessory basal nucleus
ipsi
AB
3
Basal nucleus ventral divison
ipsi
BncV
-0.5
Basolateral amygdaloid nucleus
ipsi
BL
2
Anterior basolateral nucleus
ipsi
BLA
2
Posterior basolateral nucleus
ipsi
BLP
3
Ventral basolateral nucleus
ipsi
BLV
-0.5
Basomedial amygdaloid nucleus
ipsi
BM
-0.5
Anterior basomedial nucleus
ipsi
BMA
3
Anterior basomedial nucleus caudal part
ipsi
BMAc
-0.5
Posterior basomedial nucleus
ipsi
BMP
3
Lateral amygdaloid nucleus
ipsi
LA
2
Bed nucleus of the stria terminalis caudal part caudoventral region
ipsi
BSTCacv
1
Bed nucleus of the stria terminalis caudal part perifornical region
ipsi
BSTCapf
1
Bed nucleus of the stria terminalis lateral division
ipsi
BSTL
3
Bed nucleus of the stria terminalis medial division
ipsi
BSTM
3
Central amygdaloid nucleus
ipsi
Ce
2
Central amygdaloid nucleus lateral division
ipsi
CeL
1
Central amygdaloid nucleus lateral division capsular part
ipsi
CeC
2
Interstitial nucleus of the posterior limb of the anterior commissure
ipsi
IPAC
2
Interstitial nucleus of the posterior limb of the anterior commissure caudolateral part
ipsi
IPACcl
2
Interstitial nucleus of the posterior limb of the anterior commissure rostral part
ipsi
IPACR
2
Cortex amygdala transition zone
ipsi
CxA
-0.5
Olfactory amygdala
ipsi
OA
-0.5
Amygdalopiriform transition area
ipsi
APir
3
Anterior amygdaloid area
ipsi
AA
-0.5
Anterior amygdaloid area ventral part
ipsi
AAV
-0.5
Anterior cortical amygdaloid nucleus
ipsi
ACo
3
Posterior amygdaloid nucleus
ipsi
COAp
3
Posterolateral cortical nucleus
ipsi
PLCo
3
Nucleus of the lateral olfactory tract
ipsi
LOT
3
Nucleus of the lateral olfactory tract layer 1
ipsi
LOTL1
3
Nucleus of the lateral olfactory tract layer 2
ipsi
LOTL2
1.5
Nucleus of the lateral olfactory tract layer 3
ipsi
LOTL3
1.5
Periamygdaloid complex
ipsi
PAC
2
Medial amygdaloid nucleus
ipsi
Me
2
Medial amygdaloid nucleus anterodorsal part
ipsi
MeAD
2
Medial amygdaloid nucleus posteroventral part
ipsi
MePV
2
Amygdalohippocampal area
ipsi
AHi
2
Posteromedial cortical nucleus
ipsi
PMCo
3
Claustrum
ipsi
Cl
0.5
Peripallidal region
ipsi
PePa
0
Subpallidal region
ipsi
SuPa
3
Ventral pallidum
ipsi
VP
0
Accumbens nucleus
ipsi
Ac
2
Accumbens nucleus posterolateral part
ipsi
Acbpl
2
Accumbens nucleus shell
ipsi
AcbSh
-0.5
Dorsomedial shell
ipsi
AcbShdm
-0.5
Lateral accumbens shell
ipsi
AcbShl
2
Medial accumbens shell
ipsi
AcbShm
2
Caudomedial accumbens
ipsi
AcbCM
2
Lateral nucleus accumbens
ipsi
Acl
2
Caudate putamen
ipsi
CPu
-0.5
Dorsomedial striatum
ipsi
CPudm
0.5
Ventral striatum
ipsi
CPuv
3
Dentate gyrus
ipsi
DG
0.5
Dentate gyrus mid rostrocaudal part
ipsi
DGmrc
-1
Dorsal hippocampus dentate gyrus
ipsi
DDG
3
Ventral hippocampus dentate gyrus
ipsi
VDG
3
Field CA1 of hippocampus dorsal
ipsi
CA1d
0
Field CA1 of hippocampus ventral part
ipsi
CA1v
0
Field CA2 of hippocampus
ipsi
CA2
0
Field CA3 of hippocampus
ipsi
CA3
-0.5
Subiculum dorsal part
ipsi
Sd
0
Subiculum ventral part
ipsi
Sv
-0.5
Indusium griseum
ipsi
IG
2
Presubiculum
ipsi
PrS
0
Parasubiculum
ipsi
PaS
0
Postsubiculum
ipsi
Post
0
Lateral entorhinal cortex
ipsi
LEnt
4
Medial entorhinal cortex
ipsi
MEnt
4
Medial entorhinal cortex dorsal part
ipsi
MEntD
2.5
Anterior piriform cortex
ipsi
APIRC
-0.5
Central piriform cortex
ipsi
CPC
-0.5
Posterior piriform cortex
ipsi
PPIRC
-0.5
Postpiriform transition area
ipsi
TR
3
Retrosplenial dorsal
ipsi
RSd
0
Retrosplenial ventral part
ipsi
RSPv
0
Retrosplenial ventral a
ipsi
RSv-a
0
Retrosplenial area ventral part zone b/c
ipsi
RSPv-bc
0
Retrosplenial agranular cortex
ipsi
RSA
0
Anterior cingulate cortex
ipsi
ACC
-0.5
Cingulate cortex area 1 caudal part
ipsi
Cg1c
0
Cingulate cortex area 2 caudal part
ipsi
Cg2c
0
Dorsal anterior cingulate cortex
ipsi
DACC
0
Ventral anterior cingulate cortex
ipsi
VACC
0
Prelimbic cortex
ipsi
PrL
-0.5
Infralimbic cortex
ipsi
IL
2
Infralimbic cortex rostral part
ipsi
ILR
1.5
Parietal cortex posterior area
ipsi
ParP
0
Temporal cortex
ipsi
TE
0
Auditory regions
ipsi
AU
0
Primary auditory cortex
ipsi
Au1
0
Ventral auditory areas
ipsi
AUDv
0
Agranular insular cortex
ipsi
AI
3
Agranular insular cortex dorsal part
ipsi
AID
2
Agranular insular cortex dorsal part superficial layers
ipsi
AIDsL
1.5
Agranular insular cortex posterior part
ipsi
AIP
2.5
Agranular insular cortex ventral part
ipsi
AIV
3
Agranular insular cortex ventral part jaw movement area
ipsi
AIVjm
-0.5
Anterior insular cortex
ipsi
ICXa
2
Dysgranular insular cortex
ipsi
DI
0.5
Granular insular cortex
ipsi
GI
0.5
Perirhinal cortex
ipsi
A35
4
Ectorhinal cortex
ipsi
A36
2
Ectorhinal cortex dorsal part
ipsi
Ectd
-0.5
Postrhinal cortex
ipsi
POR
0.5
Prefrontal cortex
ipsi
PFC
-0.5
Motoric regions
ipsi
M
0
Lateral agranular prefrontal cortex
ipsi
AGl
1
Medial prefrontal cortex
ipsi
mPFC
3
Medial agranular prefrontal cortex
ipsi
AGm
1
Primary visual cortex
ipsi
V1
0
Primary visual cortex binocular area
ipsi
V1B
0
Mediolateral cortical visual area
ipsi
VISlm
0
Anteromedial cortical visual area
ipsi
VISam
0
Anterior medial frontal cortex
ipsi
AMFC
3
Orbital cortex
ipsi
OrC
2
Dorsolateral orbital cortex
ipsi
DLO
-0.5
Lateral orbital cortex
ipsi
LO
3
Medial orbital cortex
ipsi
MO
-0.5
Ventral orbital cortex
ipsi
VO
2
Ventrolateral orbital area
ipsi
VLO
-0.5
Ventrolateral orbital area posterior part
ipsi
VLOp
3
Accessory olfactory bulb
ipsi
AOB
1
Accessory olfactory bulb rostral part
ipsi
AOBr
1
Accessory olfactory bulb agranular layer
ipsi
AOBaL
-0.5
Olfactory bulb A16
ipsi
MOB
3
Anterior olfactory nucleus
ipsi
AON
3
Dorsal lateral olfactory tract
ipsi
dlot
-0.5
Lateral olfactory tract
ipsi
lot
-0.5
Ventral lateral olfactory tract
ipsi
vLoLt
-0.5
Posteromedial portion of the olfactory bulb
ipsi
MOBPM
2
Olfactory tubercle
ipsi
TuO
3
Septal region
ipsi
SER
0
Lateral ventricle
ipsi
LV
-0.5
Cervical segment 1
ipsi
CS1
0
Cervical segment 2
ipsi
CS2
0
Pterygopalatine ganglion
ipsi
AutoPpG
-0.5
Neck muscle
ipsi
MuscNeck
-0.5
Posterior cricoarytenoid muscle
ipsi
MuscPCA
1
Femoral bone marrow
ipsi
OrgSkFemM
4
Olfactory epithelium
ipsi
OLfEpi
0
Lung
ipsi
OrgsLung
-10
Input from
Name
Side
Abbr.
Weight
Details
Locus coeruleus
contra
LC
-0.5
Locus coeruleus dorsal part
contra
LCD
3
Parabrachial nucleus lateral crescent
contra
PBlc
0.5
Parabrachial nucleus ventral part lateral portion
contra
PBVL
0.5
Dorsal raphe nucleus
contra
DR
-0.5
Dorsal raphe nucleus rostral part
contra
DRr
1
Endopiriform system
contra
EnN
-0.5
Medial septal nucleus
contra
MS
1
Tuberomammillary nucleus
contra
TuM
-0.5
Tuberal nucleus
contra
TU
0.5
Ventromedial hypothalamic nucleus anterior part
contra
VMHA
0.5
Ventromedial hypothalamic nucleus central part
contra
VMHC
0.5
Ventromedial hypothalamic nucleus dorsomedial part
contra
VMHDM
0.5
Ventromedial hypothalamic nucleus ventrolateral part
contra
VMHVL
0.5
Paraventricular hypothalamic nucleus anterior parvicellular part [Periventricular zone anterior region]
contra
PaAP
-0.5
Ventral part of the paraventricular hypothalamic nucleus anterior parvicellular part [Periventricular zone anterior region]
contra
vPaAP
-0.5
Adjacent to the ventral part of the paraventricular hypothalamic nucleus anterior parvicellular part [Periventricular zone anterior region]
contra
PaAPav
-0.5
Anterior part of periventricular parvocellular subdivision of paraventricular hypothalamic nucleus
contra
PVPapvA
-0.5
Perifornical nucleus
contra
PeF
-0.5
Medial group of the dorsal thalamus
contra
MED
2
Mediodorsal thalamic nucleus
contra
MD
2
Basal dorsal nucleus
contra
BnD
1
Cortex amygdala transition zone
contra
CxA
-0.5
Nucleus of the lateral olfactory tract
contra
LOT
-0.5
Nucleus of the lateral olfactory tract layer 2
contra
LOTL2
-3
Ventral pallidum
contra
VP
-0.5
Field CA1 of hippocampus
contra
CA1
2
Subiculum
contra
S
2
Subiculum ventral part
contra
Sv
-0.5
Presubiculum
contra
PrS
-0.5
Piriform cortex
contra
Pir
1
Posterior piriform cortex layer 2
contra
POPiL2
-0.5
Posterior piriform cortex layer 3
contra
POPiL3
-0.5
Cingulate cortex area 1
contra
Cg1
-0.5
Agranular insular cortex
contra
AI
3
Superficial layers of the posterior part of the agranular insular cortex
contra
AIPsL
0.5
Agranular insular cortex posterior part layer 5
contra
AIPL5
1
Agranular insular cortex posterior part layer 6
contra
AIPL6
0.5
Agranular insular cortex ventral part jaw movement area
contra
AIVjm
-0.5
Medial agranular prefrontal cortex
contra
AGm
-0.5
Olfactory bulb A16
contra
MOB
1
Ventral periaqueductal gray
ipsi
VPAG
-0.5
Substantia nigra A9
ipsi
SN
3
Substantia nigra compact part medial tier
ipsi
SNCM
1
Substantia nigra compact part rostral tier
ipsi
SNCr
-0.5
Substantia nigra compact part ventral tier
ipsi
SNCV
-0.5
Mid-dorsal sheet of the middle lateral substantia nigra
ipsi
SNmidL
-0.5
Substantia nigra medial part
ipsi
SNM
-0.5
Substantia nigra reticular part
ipsi
SNR
-0.5
Ventral tegmental area A10
ipsi
VTA
3
Ventral tegmental area A10 dorsolateral part
ipsi
VTAdL
2
Ventral tegmental area A10 lateral nuclei
ipsi
VTALN
1
Ventral tegmental area A10 lateral part
ipsi
VTAL
2
Ventral tegmental area A10 medial nuclei
ipsi
VTAmn
0
Interfascicular nucleus
ipsi
IF
3
Ventral tegmental area rostral part
ipsi
VTAR
4
Ventral tegmental area posterior part
ipsi
VTAP
1
Parabrachial pigmented nucleus
ipsi
PBP
2
Paranigral nucleus
ipsi
PN
2
Edinger Westphal nucleus
ipsi
EW
1
A4 noradrenaline cells
ipsi
A4
0.5
Locus coeruleus
ipsi
LC
3
Locus coeruleus dorsal part
ipsi
LCD
3
Locus coeruleus ventral part
ipsi
LCv
-1
Locus coeruleus ventromedial part
ipsi
VMLC
0
Nucleus incertus pars compacta
ipsi
NIc
-0.5
Nucleus incertus pars dissipata
ipsi
NId
1
Pons dorsal part
ipsi
Pdo
-0.5
Parabrachial nucleus lateral crescent
ipsi
PBlc
1
Medial parabrachial nucleus external part
ipsi
MPBE
-0.5
Parabrachial nucleus ventral part lateral portion
ipsi
PBVL
1
Subcoeruleus nucleus
ipsi
SubC
0
Nucleus of the solitary tract caudal part
ipsi
Solca
1
Raphe nuclei
ipsi
RAN
-0.5
Dorsal raphe nucleus
ipsi
DR
2
Dorsal raphe nucleus caudal part
ipsi
DRC
1.5
Dorsal raphe nucleus dorsomedial subdivision
ipsi
DRdm
3
Dorsal raphe nucleus rostral part
ipsi
DRr
3
Rostral linear nucleus of the raphe
ipsi
RLi
1
Median raphe nucleus
ipsi
MnR
1
Superior central raphe nucleus
ipsi
CS
1.5
B9 serotonin cells
ipsi
B9
1
Endopiriform system
ipsi
EnN
-0.5
Caudal endopiriform region
ipsi
CEn
-0.5
Central endopiriform system
ipsi
CEnN
-0.5
Dorsal endopiriform nucleus
ipsi
DEn
4
Rostral endopiriform region
ipsi
REn
-0.5
Ventral endopiriform nucleus
ipsi
VEn
2
Islands of Calleja
ipsi
ICj
1
Diagonal band of Broca
ipsi
DBB
2
Nucleus of the horizontal limb of the diagonal band
ipsi
HDB
3
Nucleus of the horizontal limb of the diagonal band medial part
ipsi
HDBm
1.5
Lateral intermediate part of the nucleus of the horizontal limb of the diagonal band
ipsi
LimHDB
3
Nucleus of the vertical limb of the diagonal band
ipsi
VDB
1
Nucleus of the vertical limb of the diagonal band caudal part
ipsi
VDBc
2.5
Nucleus of the vertical limb of the diagonal band rostromedial part
ipsi
VDBrm
1
Medial septal nucleus
ipsi
MS
1
Basal nucleus Meynert
ipsi
B
3
Basal nucleus Meynert anterior part
ipsi
Ban
2.5
Basal nucleus Meynert intermediate divison
ipsi
Bim
1.5
Basal nucleus Meynert posterior division
ipsi
Bpd
1
Substantia innominata
ipsi
SI
2
Substantia innominata dorsal part
ipsi
SID
-0.5
Substantia innominata ventral part
ipsi
SIV
-0.5
Lateral preoptic area
ipsi
LPO
1
Magnocellular preoptic nucleus
ipsi
MCPO
-0.5
Tenia tecta
ipsi
TT
-0.5
Ventral tenia tecta
ipsi
VTT
4
Tuberomammillary nucleus
ipsi
TuM
3
Dorsal region
ipsi
DHR
-0.5
Juxtaparaventricular part caudal [Lateral hypothalamic area [Preoptic anterior region]]
ipsi
JPVC
0
Juxtaparaventricular part rostral [Lateral hypothalamic area [Preoptic anterior region]]
ipsi
JPVR
0
Lateral hypothalamic area
ipsi
LH
2
Lateral hypothalamic area juxtadorsomedial region
ipsi
JDM
0.5
Lateral hypothalamic area perifornical part
ipsi
PFx
2
Lateral hypothalamic area posterior part
ipsi
LHAp
1
Tuberal nucleus
ipsi
TU
0.5
Medial division of the hypothalamus
ipsi
MdH
-0.5
Dorsomedial hypothalamic nucleus [Medial zone]
ipsi
DM
2
Dorsomedial hypothalamic nucleus dorsomedial part
ipsi
DMDM
2
Posterior hypothalamic area
ipsi
PHA
2
Posterior hypothalamic nucleus caudal part
ipsi
PHCa
0
Posterior hypothalamic nucleus rostral part
ipsi
PHRo
1
Ventromedial hypothalamic nucleus anterior part
ipsi
VMHA
1
Ventromedial hypothalamic nucleus central part
ipsi
VMHC
1
Ventromedial hypothalamic nucleus dorsomedial part
ipsi
VMHDM
1
Ventromedial hypothalamic nucleus ventrolateral part
ipsi
VMHVL
1
Paraventricular hypothalamic nucleus anterior parvicellular part [Periventricular zone anterior region]
ipsi
PaAP
-0.5
Ventral part of the paraventricular hypothalamic nucleus anterior parvicellular part [Periventricular zone anterior region]
ipsi
vPaAP
-0.5
Adjacent to the ventral part of the paraventricular hypothalamic nucleus anterior parvicellular part [Periventricular zone anterior region]
ipsi
PaAPav
-0.5
Anterior part of periventricular parvocellular subdivision of paraventricular hypothalamic nucleus
ipsi
PVPapvA
-0.5
Supramammillar nucleus lateral part lateral subpart
ipsi
SuMLL
0
Supramammillar nucleus lateral part medial subpart
ipsi
SuMLM
1
Supramammillar nucleus medial part
ipsi
SuMM
1
A8 dopamine cells retrorubral group
ipsi
RRF
3
Perifornical nucleus
ipsi
PeF
-0.5
Central medial thalamic nucleus
ipsi
CM
-0.5
Central medial thalamic nucleus caudal part
ipsi
CMca
1
Parafascicular thalamic nucleus
ipsi
PF
-0.5
Rhomboid thalamic nucleus
ipsi
Rh
1
Posterior thalamic nuclear group
ipsi
Po
0
Medial group of the dorsal thalamus
ipsi
MED
3
Mediodorsal thalamic nucleus
ipsi
MD
3
Mediodorsal thalamic nucleus medial part
ipsi
MDM
-0.5
Submedius thalamic nucleus
ipsi
Sub
-0.5
Midline group of the dorsal thalamus
ipsi
MTN
-0.5
Paratenial thalamic nucleus
ipsi
PT
2
Paraventricular thalamic nucleus
ipsi
PV
-0.5
Paraventricular thalamic nucleus anterior part
ipsi
PVA
1
Paraventricular thalamic nucleus posterior part
ipsi
PVP
0
Reuniens thalamic nucleus
ipsi
Re
2
Reuniens thalamic nucleus posterior part
ipsi
ReP
-0.5
Reuniens thalamic nucleus ventral part anterior portion
ipsi
ReVA
0.5
Reuniens thalamic nucleus ventral part posterior portion
ipsi
ReVP
0
Ventral posteromedial thalamic nucleus
ipsi
VPM
0
Ventromedial thalamic nucleus
ipsi
VM
-0.5
Ventral posterolateral thalamic nucleus parvicellular part
ipsi
VPLpc
0
Intralaminar nuclei
ipsi
ILN
3
Caudomedial lateral posterior thalamic nucleus
ipsi
LPcm
0.5
Lateral posterior thalamic nucleus lateral part
ipsi
LPTL
0
Rostromedial lateral posterior thalamic nucleus
ipsi
LPrm
0
Zona incerta
ipsi
ZI
-0.5
Dorsal bank of rhinal fissure
ipsi
DBrf
-1
Ventral bank of the rhinal fissure
ipsi
VBrf
-1
Basal nucleus
ipsi
Bnc
2
Accessory basal nucleus
ipsi
AB
2
Basal dorsal nucleus
ipsi
BnD
-0.5
Basal nucleus magnocellular part
ipsi
Bmc
1
Basolateral amygdaloid nucleus
ipsi
BL
-0.5
Anterior basolateral nucleus
ipsi
BLA
1.5
Posterior basolateral nucleus
ipsi
BLP
1.5
Ventral basolateral nucleus
ipsi
BLV
-0.5
Basomedial amygdaloid nucleus
ipsi
BM
2
Anterior basomedial nucleus
ipsi
BMA
1
Posterior basomedial nucleus
ipsi
BMP
2
Lateral amygdaloid nucleus
ipsi
LA
2
Bed nucleus of the stria terminalis intraamygdaloid division
ipsi
BSTIA
-0.5
Central amygdaloid nucleus
ipsi
Ce
-0.5
Central amygdaloid nucleus intermediate division
ipsi
CeI
-0.5
Central part
ipsi
CeLc
-0.5
Interstitial nucleus of the posterior limb of the anterior commissure medial part
ipsi
IPACM
0.5
Amygdalopiriform transition area
ipsi
APir
1
Anterior amygdaloid area
ipsi
AA
-0.5
Anterior cortical amygdaloid nucleus
ipsi
ACo
3
Posterior amygdaloid nucleus medial part
ipsi
COApm
3
Posterior amygdaloid nucleus
ipsi
COAp
3
Posterolateral cortical nucleus
ipsi
PLCo
2
Nucleus of the lateral olfactory tract
ipsi
LOT
3
Periamygdaloid complex
ipsi
PAC
3
Medial amygdaloid nucleus
ipsi
Me
3
Medial amygdaloid nucleus anterodorsal part
ipsi
MeAD
2
Medial amygdaloid nucleus anteroventral part
ipsi
MeAV
1
Medial amygdaloid nucleus posterodorsal part
ipsi
MePD
1
Posteromedial cortical nucleus
ipsi
PMCo
3
Claustrum
ipsi
Cl
3
Peripallidal region
ipsi
PePa
0
Subpallidal region
ipsi
SuPa
3
Ventral pallidum
ipsi
VP
-0.5
Accumbens nucleus
ipsi
Ac
-0.5
Dorsal striatum
ipsi
CPud
-1
Parasubthalamic nucleus
ipsi
PSTh
3
Dentate gyrus
ipsi
DG
0
Field CA1 of hippocampus
ipsi
CA1
2
Field CA1 of hippocampus dorsal
ipsi
CA1d
1
Field CA1 of hippocampus layer stratum pyramidale
ipsi
CA1pyr
-0.5
Field CA1 of hippocampus ventral part
ipsi
CA1v
2
Field CA1 of hippocampus ventral layer stratum pyramidal cells
ipsi
CA1vL3spc
-0.5
Field CA3 of hippocampus
ipsi
CA3
0
Subiculum
ipsi
S
2
Subiculum dorsal part
ipsi
Sd
0
Subiculum ventral part
ipsi
Sv
1.5
Indusium griseum
ipsi
IG
0
Presubiculum
ipsi
PrS
-0.5
Amygdaloentorhinal transitional field 6
ipsi
AE
1
Central field of the entorhinal cortex
ipsi
CFEnt
-1
Rostrocaudal extend of the entorhinal cortex
ipsi
RCent
-1
Dorsal intermediate entorhinal cortex
ipsi
DIEnt
2.5
Dorsolateral entorhinal cortex
ipsi
DLEnt
1
Lateral entorhinal cortex
ipsi
LEnt
3
Medial entorhinal cortex
ipsi
MEnt
2
Medial entorhinal cortex dorsal part
ipsi
MEntD
1
Caudal entorhinal field 1
ipsi
CEnt1
2.5
Ventral intermediate entorhinal cortex
ipsi
VIEnt
2
Anterior piriform cortex
ipsi
APIRC
1.5
Anterior piriform cortex ventrolateral part
ipsi
APIRCvL
1
Central piriform cortex
ipsi
CPC
1
Posterior piriform cortex
ipsi
PPIRC
1
Postpiriform transition area
ipsi
TR
2.5
Retrosplenial ventral part
ipsi
RSPv
0
Retrosplenial agranular cortex
ipsi
RSA
0
Cingulate cortex area 1 caudal part
ipsi
Cg1c
1
Cingulate cortex area 2 caudal part
ipsi
Cg2c
0
Dorsal anterior cingulate cortex
ipsi
DACC
0
Ventral anterior cingulate cortex
ipsi
VACC
0
Prelimbic cortex
ipsi
PrL
1
Prelimbic cortex dorsal part
ipsi
PrLd
0
Prelimbic cortex ventral part
ipsi
PrLv
1
Infralimbic cortex
ipsi
IL
2.5
Frontal cortex area 2
ipsi
Fr2
0
Temporal cortex
ipsi
TE
0
Auditory regions
ipsi
AU
0
Primary auditory cortex
ipsi
Au1
0
Ventral auditory areas
ipsi
AUDv
0
Agranular insular cortex
ipsi
AI
3
Agranular insular cortex dorsal part
ipsi
AID
2
Agranular insular cortex posterior part
ipsi
AIP
4
Agranular insular cortex posterior part depressor site
ipsi
AIPd
2
Superficial layers of the posterior part of the agranular insular cortex
ipsi
AIPsL
0.5
Agranular insular cortex posterior part layer 5
ipsi
AIPL5
2
Agranular insular cortex posterior part layer 6
ipsi
AIPL6
1
Agranular insular cortex posterior part pressor site
ipsi
AIPp
3
Agranular insular cortex ventral part
ipsi
AIV
3
Agranular insular cortex ventral part jaw movement area
ipsi
AIVjm
-0.5
Dysgranular insular cortex
ipsi
DI
3
Gustatory dysgranular insular cortex
ipsi
DIg
2
Visceral dysgranular insular cortex layer 2
ipsi
DIvL2
3
Visceral dysgranular insular cortex layer 3
ipsi
DIvL3
3
Granular insular cortex
ipsi
GI
2.5
Perirhinal cortex
ipsi
A35
1.5
Perirhinal cortex anterior portion layer 3 to layer 5
ipsi
PRhaL3L5
1
Perirhinal cortex anterior portion layer 5 to layer 6
ipsi
PRhaL5L6
1
Perirhinal cortex anterior portion layer 6
ipsi
PRhaL6
1
Ectorhinal cortex
ipsi
A36
2
Postrhinal cortex
ipsi
POR
0.5
Dorsal peduncular cortex deep layers
ipsi
DPdL
-0.5
Motoric regions
ipsi
M
3
Lateral agranular prefrontal cortex
ipsi
AGl
-0.5
Medial agranular prefrontal cortex
ipsi
AGm
1
Primary somatosensory cortex
ipsi
S1
0
Secondary somatosensory cortex
ipsi
S2
0
Primary visual cortex
ipsi
V1
0
Secondary visual cortex lateral area
ipsi
V2L
0
Primary visual cortex binocular area
ipsi
V1B
1.5
Laterolateral cortical visual area
ipsi
VISll
0
Anteromedial cortical visual area
ipsi
VISam
0
Orbitofrontal cortex
ipsi
OrFCx
1
Anterior medial frontal cortex
ipsi
AMFC
1
Orbital cortex
ipsi
OrC
1
Lateral orbital cortex
ipsi
LO
4
Medial orbital cortex
ipsi
MO
2
Ventral orbital cortex
ipsi
VO
1
Ventrolateral orbital area
ipsi
VLO
4
Olfactory system
ipsi
OSY
3
Accessory olfactory bulb
ipsi
AOB
2.5
Olfactory bulb A16
ipsi
MOB
3
External plexiform layer of the olfactory bulb
ipsi
OBepl
3
Glomerular layer of the olfactory bulb
ipsi
OBglo
-0.5
Tufted cells of the glomerular layer of the olfactory bulb
ipsi
OBgloTC
3
Inframitral short axon cells in the granular cell layer of the olfactory bulb
ipsi
OBgraim
-0.5
Mitral cell layer of the olfactory bulb
ipsi
Mi
3
Mitral cells of the olfactory bulb
ipsi
MiC
-0.5
Ventral mitral cell layer of the olfactory bulb
ipsi
MiV
-0.5
Vicinity of the mitral cell layer
ipsi
OcxLvmi
1
Olfactory cortex lateral part of the deep granule cell layer tufted cells
ipsi
OcxLdGT
-2
Olfactory cortex lateral part superficial part of the external piriform layer tufted cells
ipsi
OcxLsEPt
-2
Anterior olfactory nucleus
ipsi
AON
4
Posteromedial portion of the olfactory bulb A16
ipsi
MOBpm
2
Olfactory bulb A16 anterior half
ipsi
MOBah
-0.5
Olfactory tubercle
ipsi
TuO
3
Lateral septal nucleus
ipsi
LS
3
Vagus nerve
ipsi
AutoV
-0.5
Vitreous humor of eye
contra
OrgVHEye
-0.5
Key for weights
Value
Weight
-3
unknown
-2
fibers of passage
-1
not clear
-0.5
exists
0
not present
0.5
very light
1
light / sparse
1.5
light / moderate
2
moderate / dense
2.5
moderate / strong
3
strong
4
very strong
Homepage
|
Staff
|
neuroVIISAS
|
Rat connectome
|
Other connectomes
|
Neuroimaging
|
Neurodegeneration
|
Students
|
Links
|
Publications