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Rat connectome



Lateral hypothalamic area ventral part right


Abbreviation
LHAvp
Color       
Superior regionsLateral hypothalamic area

SynonymsAbbr.Language
Lateral hypothalamic area ventral partLHAvp 
Ventral lateral hypothalamic area Eng
Lateral hypothalamic area ventral regionLHAvEng

SubregionsSide
Lateral hypothalamic area ventral part lateral zoneright
Lateral hypothalamic area ventral part medial zoneright

Output to

NameSideAbbr.WeightDetails
Medial longitudinal fasciculuscontramlf-0.5
Nuclei of the lateral lemniscuscontraNLL-0.5
Perilemniscal nucleus ventral partcontraPLZV0
Sagulum nucleuscontraSag0
Medial paralemniscal nucleuscontraMPL-0.5
Interstitial nucleus of medial longitudinal fasciculuscontraIMLF-0.5
Oculomotor nucleuscontra30
Dorsolateral periaqueductal graycontraDLPAG-0.5
Dorsomedial periaqueductal graycontraDMPAG0
Lateral periaqueductal graycontraLPAG-0.5
Ventrolateral periaqueductal graycontraVLPAG-0.5
Tectospinal tractcontrats-0.5
Dorsal peduncular pontine nucleuscontraDPPn0
Subpeduncular tegmental nucleuscontraSPTg-0.5
Laterodorsal tegmental nucleuscontraLDTg-0.5
Ventral tegmental nucleuscontraVTg-0.5
Dorsal tegmental nucleus central partcontraDTgC0
Dorsal tegmental nucleus pericentral partcontraDTgP0
Pedunculopontine tegmental nucleuscontraPPTg-0.5
Edinger Westphal nucleuscontraEW-0.5
PonscontraP0
A5 noradrenaline cellscontraA5-0.5
A7 noradrenaline cellscontraA7-0.5
Barringtons nucleuscontraBar-0.5
Locus coeruleuscontraLC-0.5
Parapyramidal nucleuscontraPPy-0.5
Dorsomedial tegmental areacontraDMTg-0.5
Reticulotegmental nucleus of the ponscontraRtTg0
Prepositus nucleuscontraPr-0.5
Intermediate reticular nucleuscontraIRt-0.5
Isthmic reticular formationcontraisRT-0.5
Paramedian reticular nucleuscontraPMn0
Deep mesencephalic nucleuscontraDpMe-0.5
Precuneiform areacontraPCnFa0
Pontine reticular nucleus oral partcontraPnO-0.5
Pontine reticular nucleus paramedian partcontraPRNpm-0.5
Pontine reticular nucleus ventral partcontraPnV-0.5
Pontine reticular nucleus caudal partcontraPNC-0.5
Koelliker Fuse nucleuscontraKF-0.5
Lateral parabrachial nucleuscontraLPB-0.5
Lateral parabrachial nucleus dorsal partcontraLPBD-0.5
Lateral parabrachial nucleus lateral partcontraLPBL-0.5
Lateral parabrachial nucleus central lateral partcontraLPBCL-0.5
Parabrachial nucleus medialcontraPBnMe-0.5
Gigantocellular reticular nucleuscontraGi-0.5
Gigantocellular reticular nucleus alpha partcontraGiA-0.5
Gigantocellular reticular nucleus ventral partcontraGiV-0.5
Lateral reticular nucleuscontraLRt-0.5
Medial subnucleus reticularis ventraliscontraMSRV-0.5
Medullary reticular nucleus dorsal partcontraMdDd-0.5
Parvicellular reticular nucleuscontraPCRt0
Parvicellular reticular nucleus alpha partcontraPCRtA0
Rhabdoid nucleuscontraRbd0
Sphenoid nucleuscontraSph0
Nucleus of the trapezoid bodycontraTz0
Subcoeruleus nucleus alpha partcontraSubCA-0.5
Subcoeruleus nucleus dorsal partcontraSubCD-0.5
Subcoeruleus nucleus ventral partcontraSubCV-0.5
Supragenual nucleuscontraSGe-0.5
C1 adrenaline cellscontraC1-0.5
C2 adrenaline cellscontraC2-0.5
C3 adrenaline cellscontraC3-0.5
Ambiguus nucleuscontraAmb-0.5
Boetzinger complexcontraBo-0.5
Abducens nucleuscontra60
Facial nucleuscontra70
Perifacial zonecontraP7-0.5
Hypoglossal nucleuscontra12S-0.5
Mesencephalic trigeminal tractcontrame5-0.5
Supratrigeminal nucleuscontraSu5-0.5
Motor trigeminal nucleuscontraMo50
Spinal trigeminal nucleuscontraSp5nc-0.5
Peritrigeminal zonecontraP5-0.5
Trigeminal solitary transition zonecontra5Sol0
Trigeminothalamic tractcontratth-0.5
Paratrochlear nucleuscontraPa4-0.5
Trochlear nucleuscontra4-0.5
Medial vestibular nucleus magnocellular partcontraMVeMC0
Vestibulomesencephalic tractcontra8tv-0.5
Vestibulospinal tractcontravesp0
Nucleus of the solitary tractcontraSol-0.5
Parasolitary nucleuscontraPSol0
Solitary tractcontrasol-0.5
Dorsal motor nucleus of vaguscontra10-0.5
Dorsal raphe nucleuscontraDR-0.5
Median raphe nucleuscontraMnR-0.5
Pontine raphe nucleuscontraPnR-0.5
Raphe magnus nucleuscontraRMg-0.5
Raphe obscurus nucleuscontraROb-0.5
Raphe pallidus nucleuscontraRPa-0.5
Paramedial raphe nucleuscontraRApam-0.5
A1 noradrenergic cells rostral partcontraA1R-0.5
A2 noradrenergic cellscontraA2-0.5
Epifascicular nucleuscontraEF0
Linear nucleus of the medullacontraLi0
Nucleus of RollercontraRo0
Inferior olivecontraIO0
Juxtaolivary nucleuscontraJxO-0.5
Caudal periolivary nucleuscontraCPO0
Lateral superior olivecontraLSO0
Dorsal paragigantocellular nucleuscontraDPGi-0.5
Lateral paragigantocellular nucleuscontraLPGi-0.5
Lateral paragigantocellular nucleus alpha partcontraLPBGiA-0.5
Lateral paragigantocellular nucleus external partcontraLPBGiE0
Pre Boetzinger complexcontraPrBo-0.5
Retroambiguus nucleuscontraRAmb-0.5
Rostral ventral respiratory groupcontraRVRG-0.5
Inferior salivatory nucleuscontraIS-0.5
Superior salivatory nucleuscontraSuS-0.5
Paraventricular hypothalamic nucleuscontraPa-0.5
Nucleus X [Special group]contraNcX0
Superior cerebral pedunclecontrasucp-0.5
Medial lemniscuscontraml-0.5
Ventral spinocerebellar tractcontravsc0
Field CA1 of hippocampus caudal partcontraCA1ca-0.5
Central cervical nucleuscontraMESccn0
Pyramidal tractcontrapy0
Rubrospinal tractcontrars-0.5
Central gray mesencephalic part inferior colliculus levelipsiCGMinf-1
Central gray mesencephalic part superior colliculus levelipsiCGMsc-1
Medial longitudinal fasciculusipsimlf1
Nuclei of the lateral lemniscusipsiNLL1
Perilemniscal nucleus ventral partipsiPLZV0
Sagulum nucleusipsiSag0
Medial paralemniscal nucleusipsiMPL0.5
Interstitial nucleus of medial longitudinal fasciculusipsiIMLF0.5
Oculomotor nucleusipsi30
Periaqueductal grayipsiPAG1.5
Dorsolateral periaqueductal grayipsiDLPAG0.5
Dorsomedial periaqueductal grayipsiDMPAG0
Lateral periaqueductal grayipsiLPAG2
Ventrolateral periaqueductal grayipsiVLPAG2
Tectospinal tractipsits0.5
Central tegmental field lateral partipsiTGACL-0.5
Dorsal peduncular pontine nucleusipsiDPPn0
Subpeduncular tegmental nucleusipsiSPTg2
Laterodorsal tegmental nucleusipsiLDTg2
Ventral tegmental nucleusipsiVTg1
Dorsal tegmental nucleus central partipsiDTgC0
Dorsal tegmental nucleus pericentral partipsiDTgP0
Ventral tegmentum adjacent to mesencephalic periaqueductal grayipsiTGAamPAG-0.5
Pedunculopontine tegmental nucleusipsiPPTg3
Edinger Westphal nucleusipsiEW1
PonsipsiP0
A5 noradrenaline cellsipsiA51
A7 noradrenaline cellsipsiA70.5
Barringtons nucleusipsiBar0.5
Locus coeruleusipsiLC1
Parapyramidal nucleusipsiPPy0.5
Dorsomedial tegmental areaipsiDMTg0.5
Reticulotegmental nucleus of the ponsipsiRtTg0
Prepositus nucleusipsiPr0.5
Intermediate reticular nucleusipsiIRt2
Isthmic reticular formationipsiisRT2
Paramedian reticular nucleusipsiPMn0
Deep mesencephalic nucleusipsiDpMe0.5
Precuneiform areaipsiPCnFa0
Pontine reticular nucleus oral partipsiPnO1
Pontine reticular nucleus paramedian partipsiPRNpm0.5
Pontine reticular nucleus ventral partipsiPnV1
Pontine reticular nucleus caudal partipsiPNC1
Koelliker Fuse nucleusipsiKF1
Lateral parabrachial nucleusipsiLPB1
Lateral parabrachial nucleus dorsal partipsiLPBD1
Lateral parabrachial nucleus lateral partipsiLPBL1
Lateral parabrachial nucleus central lateral partipsiLPBCL1
Parabrachial nucleus medialipsiPBnMe1
Gigantocellular reticular nucleusipsiGi1
Gigantocellular reticular nucleus alpha partipsiGiA2
Gigantocellular reticular nucleus ventral partipsiGiV0.5
Lateral reticular nucleusipsiLRt1
Medial subnucleus reticularis ventralisipsiMSRV1
Medullary reticular nucleus dorsal partipsiMdDd1
Parvicellular reticular nucleusipsiPCRt0
Parvicellular reticular nucleus alpha partipsiPCRtA0
Rhabdoid nucleusipsiRbd0
Sphenoid nucleusipsiSph0
Nucleus of the trapezoid bodyipsiTz0
Subcoeruleus nucleus alpha partipsiSubCA1
Subcoeruleus nucleus dorsal partipsiSubCD2
Subcoeruleus nucleus ventral partipsiSubCV0.5
Supragenual nucleusipsiSGe0.5
C1 adrenaline cellsipsiC11
C2 adrenaline cellsipsiC20.5
C3 adrenaline cellsipsiC31
Ambiguus nucleusipsiAmb0.5
Boetzinger complexipsiBo1
Abducens nucleusipsi60
Facial nucleusipsi70
Perifacial zoneipsiP71
Hypoglossal nucleusipsi12S1
Mesencephalic trigeminal tractipsime50.5
Supratrigeminal nucleusipsiSu51
Motor trigeminal nucleusipsiMo50
Spinal trigeminal nucleusipsiSp5nc0.5
Peritrigeminal zoneipsiP50.5
Trigeminal solitary transition zoneipsi5Sol0
Trigeminothalamic tractipsitth0.5
Paratrochlear nucleusipsiPa41
Trochlear nucleusipsi41
Medial vestibular nucleus magnocellular partipsiMVeMC0
Vestibulomesencephalic tractipsi8tv0.5
Vestibulospinal tractipsivesp0
Nucleus of the solitary tractipsiSol1
Parasolitary nucleusipsiPSol0
Solitary tractipsisol0.5
Dorsal motor nucleus of vagusipsi101
Dorsal raphe nucleusipsiDR2
Median raphe nucleusipsiMnR0.5
Pontine raphe nucleusipsiPnR1
Raphe magnus nucleusipsiRMg2
Raphe obscurus nucleusipsiROb0.5
Raphe pallidus nucleusipsiRPa1
Paramedial raphe nucleusipsiRApam1
A1 noradrenergic cells rostral partipsiA1R2
A2 noradrenergic cellsipsiA20.5
Epifascicular nucleusipsiEF0
Linear nucleus of the medullaipsiLi0
Nucleus of RolleripsiRo0
Inferior oliveipsiIO0
Juxtaolivary nucleusipsiJxO0.5
Caudal periolivary nucleusipsiCPO0
Lateral superior oliveipsiLSO0
Dorsal paragigantocellular nucleusipsiDPGi0.5
Lateral paragigantocellular nucleusipsiLPGi2
Lateral paragigantocellular nucleus alpha partipsiLPBGiA1
Lateral paragigantocellular nucleus external partipsiLPBGiE0
Pre Boetzinger complexipsiPrBo2
Retroambiguus nucleusipsiRAmb1
Rostral ventral respiratory groupipsiRVRG1
Inferior salivatory nucleusipsiIS0.5
Superior salivatory nucleusipsiSuS1
Median eminenceipsiME-0.5
Nucleus of the horizontal limb of the diagonal band dorsal partipsiHDBd2
Substantia innominata ventral partipsiSIV2
Magnocellular preoptic nucleusipsiMCPO2
Dorsomedial hypothalamic nucleusipsiDMHy1
Arcuate nucleusipsiArc2
Paraventricular hypothalamic nucleusipsiPa3
Nucleus X [Special group]ipsiNcX0
Central medial thalamic nucleusipsiCM-0.5
Rhomboid thalamic nucleusipsiRh-0.5
Intermediodorsal thalamic nucleusipsiIMD-0.5
Paraventricular thalamic nucleus anterior partipsiPVA-0.5
Paraventricular thalamic nucleus middle divisionipsiPVMiD-0.5
Paraventricular thalamic nucleus posterior partipsiPVP-0.5
Reuniens thalamic nucleusipsiRe-0.5
Lateral habenular nucleusipsiLHb2
Pineal glandipsiPi4
Superior cerebral peduncleipsisucp1
Medial lemniscusipsiml1
Ventral spinocerebellar tractipsivsc0
Field CA1 of hippocampus caudal partipsiCA1ca1
Lateral septal nucleus intermediate partipsiLSI2
Lateral septal nucleus rostral partipsiLSr-0.5
Lateral septal nucleus ventral partipsiLSV2
Ventral septal regionipsiVSER2
Central cervical nucleusipsiMESccn0
Pyramidal tractipsipy0
Rubrospinal tractipsirs0.5
Cervical segment 2ipsiCS22
Thoracal segment 8ipsiT82
Lumbar segment 1ipsiL12
Lumbar segment 6ipsiL62
Sacral segment 1ipsiSa12
Sacral segment 4ipsiSa42
Facial nervecontra7fn0
Facial nerveipsi7fn0
ClitorisipsiOrgCLi1
VaginaipsiOrgVag-10

Input from

NameSideAbbr.WeightDetails
Middle third of the intermediate layer of the superior colliculuscontraSCimt1
Middle third of the deep gray layer of the superior colliculuscontraDpGmt1
Ventromedial hypothalamic nucleus anterior partcontraVMHA0.5
Periaqueductal grayipsiPAG2
Dorsolateral periaqueductal gray rostral partipsiPAGdlr-0.5
Superior colliculus intermediate layersipsiSCi-0.5
Middle third of the intermediate layer of the superior colliculusipsiSCimt2
Superior colliculus deep layersipsiSCd-0.5
Middle third of the deep gray layer of the superior colliculusipsiDpGmt2
Superior colliculus deep layers rostral partipsiSCdr2
Lateral parabrachial nucleusipsiLPB-0.5
Substantia innominataipsiSI3
Magnocellular preoptic nucleusipsiMCPO3
Lateral hypothalamic area anterior part [Preoptic anterior region]ipsiLHAapar2
Lateral hypothalamic area posterior part [Preoptic anterior region]ipsiLHApPAR2
Lateral hypothalamic area premammillary subfornical region [Preoptic anterior region]ipsiLHAsfp1.5
Lateral hypothalamic area motor related juxtaventromedial regionipsiLHAjvm0
Lateral hypothalamic area subfornical region anterior zoneipsiLHAsfa2
Anterior hypothalamic nucleusipsiAHn-2
Ventromedial hypothalamic nucleus anterior partipsiVMHA1
Suprachiasmatic nucleusipsiSCh-2
Suprachiasmatic nucleus ventrolateral partipsiSCnVL-2
Premammillary nucleus dorsal partipsiPMD1
Perifornical nucleus medial partipsiPeFM-2
Basolateral amygdaloid nucleusipsiBL-0.5
Anterior basolateral nucleusipsiBLA0
Medial half of the anterior basomedial nucleusipsiBMAmh3
Lateral nucleus caudal thirdipsiLAct-0.5
Ventrolateral corner of the lateral amygdalar nucleus caudal third LvipsiLActvL3
Ventrolateral part of the lateral nucleusipsiLaVL3
Bed nucleus of the stria terminalis intraamygdaloid divisionipsiBSTIA3
Central amygdaloid nucleusipsiCe3
Capsule like area surrounding central amygdaloid nucleusipsiCec1.5
Central amygdaloid nucleus lateral divisionipsiCeL1.5
Central amygdaloid nucleus medial divisionipsiCeM1.5
Posterior amygdaloid nucleusipsiCOAp-0.5
Parasubthalamic nucleusipsiPSTh1
Prelimbic cortex ventral part layer 5ipsiPrLvL5-0.5
Prelimbic cortex ventral part layer 6ipsiPrLvL6-0.5
Infralimbic cortexipsiIL-0.5
Infralimbic cortex layer 5ipsiILL5-0.5
Infralimbic cortex layer 6ipsiILL6-0.5
Medial prefrontal cortex ventrocaudal partipsimPFCvc-0.5
Medial prefrontal cortex ventrocaudal part layer 5ipsimPFCvcL5-0.5
Medial prefrontal cortex ventrocaudal part layer 6ipsimPFCvcL6-0.5
Ventral orbital cortexipsiVO-0.5
Ventral orbital cortex layer 5ipsiVOL5-0.5
Ventral orbital cortex layer 6ipsiVOL6-0.5
Lateral septal nucleus caudal partipsiLSc3

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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