University of Rostock

Department of Anatomy

Neuroscience Group

  Homepage

 Staff

 neuroVIISAS

 Rat connectome

 Other connectomes

 Neuroimaging

 Neurodegeneration

 Neuroproteomics

 Students

 Links

 Publications

Rat connectome



Central amygdaloid nucleus lateral division right


Abbreviation
CeL
Color       
Superior regionsCentral amygdaloid nucleus

SynonymsAbbr.Language
Central amygdaloid nucleus lateral divisionCeLEng
 CeLCn 
Central nucleus of amygdala lateral partCEAl 
Lateral subdivision of central amygdaloid nucleus  
Lateral amygdalar nucleus medial partCEAlEng
Lateral central amygdaloid nucleus Eng
Lateral subdivision of the central amygdaloid nucleus  
 CLEng
Central nucleus lateral divisionCElEng
Lateral division of the central nucleus of the amygdala Eng
Lateral part of the central nucleus Eng
Lateral portion of the central amygdaloid nucleus Eng
Central amygdalar nucleus lateral partCEAlEng

SubregionsSide
Central amygdaloid nucleus lateral division capsular partright
Central amygdaloid nucleus lateral division caudal partright
Central amygdaloid nucleus lateral division dorsal partright
Central amygdaloid nucleus lateral division lateral partright
Central amygdaloid nucleus lateral division medial partright
Central amygdaloid nucleus lateral division rostrolateral portionright
Central partright
Dorsalmost part of the lateral portion of the central amygdaloid nucleusright
Central amygdaloid nucleus lateral division rostral partright
Central amygdaloid nucleus lateral division caudomedial partright

Output to

NameSideAbbr.WeightDetails
Lateral periaqueductal graycontraLPAG1
Ventrolateral periaqueductal graycontraVLPAG1
Substantia nigra A9contraSN0.5
Intermediate reticular nucleuscontraIRt1
Pontine reticular nucleuscontraPRN0.5
Parabrachial nucleuscontraPB-0.5
Lateral parabrachial nucleus caudal partcontraLPBcp0.5
Parabrachial nucleus caudal partcontraPBca1
Lateral reticular nucleuscontraLRt1
C2 adrenaline cellscontraC20.5
Area postremacontraAP0.5
Hypoglossal nucleuscontra12S0.5
Nucleus of the solitary tractcontraSol1.5
Nucleus of the solitary tract caudal partcontraSolca0.5
Nucleus of the solitary tract commissural partcontraSolC1
Nucleus of the solitary tract medial partcontraSolM1
Nucleus of the solitary tract medial part mediodorsal zonecontraSolMmd1
Nucleus of the solitary tract medial part ventral zonecontraSolMv1
Dorsal motor nucleus of vaguscontra101.5
Dorsal motor nucleus of vagus dorsal partcontra10d1
Rostral ventrolateral medullacontraRVLM1
Cuneate nucleuscontraCu0.5
GracilecontraGra0.5
Lateral paragigantocellular nucleuscontraLPGi1
Parastriatal nucleuscontraPS1
A8 dopamine cells retrorubral groupcontraRRF0.5
Bed nucleus of the stria terminaliscontraBST-0.5
Bed nucleus of the stria terminalis anterior medial partcontraBSTAM1
Bed nucleus of the stria terminalis lateral division posterior partcontraBSTLP2
Bed nucleus of the stria terminalis lateral division ventral partcontraBSTLV2
Anterolateral subnulceus of the ventrolateral bed nucleus of the stria terminaliscontraBSTALVL1
Fusiform subnucleus of the ventrolateral bed nucleus of the stria terminaliscontraBSTFuVL1
Central grayipsiCG-0.5
Central gray dorsal partipsiCGD-0.5
Central gray lateral ventral partipsiCGVD3
Central gray medial partipsiCGMe-0.5
Central gray ventral areaipsiCGva1
Central gray mesencephalic part ventrolateral regionipsiCGMvL-0.5
Dorsal terminal nucleus of the accessory optic tractipsiDT-0.5
Periaqueductal grayipsiPAG1
Dorsolateral periaqueductal grayipsiDLPAG1
Lateral periaqueductal grayipsiLPAG2
Periaqueductal gray dorsal partipsiPAGd1
Ventral periaqueductal grayipsiVPAG1
Ventrolateral periaqueductal grayipsiVLPAG2
Ventromedial periaqueductal grayipsiVMPAG1
Periventricular gray matteripsiPVG1
Superior colliculusipsiSC1
Superior colliculus deep layersipsiSCd0.5
Dorsal tegmental bundleipsidtg-2
Substantia nigra A9ipsiSN1
Substantia nigra compact partipsiSNC3
Substantia nigra compact part lateral tieripsiSNCL2
Substantia nigra compact part rostral tier dorsolateral regionipsiSNCrdL1
Substantia nigra compact part rostromedialipsiSNCrm2
Substantia nigra lateral partipsiSNL2
Substantia nigra medial partipsiSNM1
Substantia nigra reticular partipsiSNR1
Ventral tegmental area A10ipsiVTA2
Ventral tegmental area A10 dorsolateral part dorsal periventricular partipsiVTAdLdv0.5
Ventral tegmental area A10 lateral partipsiVTAL1
Caudal linear nucleus of the rapheipsiCLi1.5
Retrorubral nucleusipsiRR-1
Middle part of the retrorubral fieldipsiRRmi3
Pedunculopontine tegmental nucleusipsiPPTg-1
Caudolateral tegmental nucleusipsiTGAcL1
Paraflocculus ventral partipsiPFlv1
FlocculusipsiFl1
Superior cerebellar peduncleipsisucep-2
A5 noradrenaline cellsipsiA51
A7 noradrenaline cellsipsiA71
Barringtons nucleusipsiBar1
Locus coeruleusipsiLC3
Prelocus coeruleus nucleusipsiPLC3
Pontine grayipsiPG1
Intermediate reticular nucleusipsiIRt2
Mesencephalic reticular formationipsiMRF-0.5
Pontine reticular nucleusipsiPRN2.5
Pontine reticular nucleus caudal partipsiPNC-0.5
Parabrachial nucleusipsiPB2
Koelliker Fuse nucleusipsiKF1
Lateral parabrachial nucleusipsiLPB3
Lateral parabrachial nucleus caudal partipsiLPBcp1.5
Lateral parabrachial nucleus dorsolateral partipsiLPBdL0
Lateral parabrachial nucleus external partipsiLPBE3
Lateral parabrachial nucleus external lateral partipsiLPBEL3
Lateral parabrachial nucleus external part outer portionipsiLPBEop3
Lateral parabrachial nucleus internal partipsiLPBI0
Lateral parabrachial nucleus lateral partipsiLPBL3
Lateral parabrachial nucleus central lateral partipsiLPBCL3
Parabrachial nucleus central lateral partipsiPBCeL2
Parabrachial nucleus dorsolateral partipsiPBDL2
Parabrachial nucleus external divison lateral partipsiPBeDL3
Parabrachial nucleus external divison rostral part of the lateral partipsiPBeDLR3
Parabrachial nucleus medialipsiPBnMe2
Medial parabrachial nucleus external partipsiMPBE3
Medial parabrachial nucleus medial divisionipsiMPBM1
Parabrachial nucleus medial caudodorsal regionipsiPBnMecd3
Parabrachial nucleus rostral partipsiPBro-0.5
Caudal part of the ventral parabrachial nucleusipsiPBCV3
Parabrachial nucleus ventral part lateral portionipsiPBVL2
Parabrachial nucleus waist partipsiPBW3
Gigantocellular reticular nucleus alpha partipsiGiA0.5
Lateral reticular nucleusipsiLRt2
Medullary reticular nucleusipsiMdD1
Parvicellular reticular nucleusipsiPCRt1
Parvicellular reticular nucleus alpha partipsiPCRtA1
Subcoeruleus nucleusipsiSubC1
C2 adrenaline cellsipsiC22
C3 adrenaline cellsipsiC30.5
Ambiguus nucleusipsiAmb-0.5
Area postremaipsiAP0.5
Hypoglossal nucleusipsi12S1
Mesencephalic trigeminal nucleusipsiMe52
Mesencephalic trigeminal nucleus caudal poleipsiMe5cp1
Nucleus of the solitary tractipsiSol2.5
Nucleus of the solitary tract caudal partipsiSolca0.5
Nucleus of the solitary tract central part lateral zoneipsiSolCL2
Nucleus of the solitary tract commissural partipsiSolC3
Nucleus of the solitary tract dorsal partipsiSolD1
Nucleus of the solitary tract dorsolateral partipsiSolDL1
Nucleus of the solitary tract dorsomedial partipsiSolDM0.5
Nucleus of the solitary tract intermediate partipsiSolIM2
Nucleus of the solitary tract intermediate part medial zoneipsiSoliMm1
Nucleus of the solitary tract intermediate part parvicellular subdivisionipsiSoliMp1
Nucleus of the solitary tract medial partipsiSolM3
Nucleus of the solitary tract medial part medial zoneipsiSolMm3
Nucleus of the solitary tract medial part mediodorsal zoneipsiSolMmd2
Nucleus of the solitary tract medial part ventral zoneipsiSolMv3
Nucleus of the solitary tract rostral partipsiSolro3
Nucleus of the solitary tract ventral partipsiSolV1
Nucleus of the solitary tract ventral part medial zoneipsiSolVm1
Nucleus of the solitary tract ventrolateral partipsiSolVL2
Medial part of the ventrolateral nucleus of the solitary tractipsiSolMVL1
Dorsal motor nucleus of vagusipsi103
Dorsal motor nucleus of vagus dorsal partipsi10d3
Dorsal motor nucleus of vagus dorsomedial partipsi10dm0.5
Dorsal motor nucleus of vagus medial partipsi10M1
Surrounding of the boundaries of the dorsal motor nucleus of vagusipsi10sb3
Dorsal raphe nucleusipsiDR2
Linear nucleus of the rapheipsiLIR0.5
Dorsal linear nucleus of the rapheipsiLIRD0.5
Raphe magnus nucleusipsiRMg0.5
Raphe pallidus nucleusipsiRPa0.5
Ventral lateral medulla oblongataipsiMVL0.5
Rostral ventrolateral medullaipsiRVLM2
Rostroventrolateral regions of the ventral lateral medulla oblongataipsiRVLMVL-0.5
Caudal medulla oblongataipsiCMeOb1
A2 noradrenergic cellsipsiA21
Cuneate nucleusipsiCu1
GracileipsiGra0.5
Dorsomedial medullary region oblongataipsiMeObdm1
Lateral paragigantocellular nucleusipsiLPGi2
Ventral medulla oblongataipsiVMeO1
Substantia innominataipsiSI3
Substantia innominata caudal aspectipsiSIc1
Substantia innominata dorsal partipsiSID3
Substantia innominata dorsomedial aspectipsiSIdm2
Substantia innominata rostral aspectipsiSIr1
Substantia innominata ventrolateral aspectipsiSIvl2
Lateral preoptic areaipsiLPO1
Medial preoptic areaipsiMPA0
Medial preoptic nucleus lateral partipsiMPOL0
Juxtaparaventricular part caudal [Lateral hypothalamic area [Preoptic anterior region]]ipsiJPVC0
Juxtaparaventricular part rostral [Lateral hypothalamic area [Preoptic anterior region]]ipsiJPVR0
Lateral hypothalamic areaipsiLH4
Lateral hypothalamic area juxtadorsomedial regionipsiJDM2
Lateral hypothalamic area medial partipsiLHAm4
Lateral hypothalamic area perifornical partipsiPFx4
Lateral hypothalamic area ventral partipsiLHAvp1.5
Lateral hypothalamic area ventrolateral partipsiLHvL1
Lateral hypothalamic area ventromedial partipsiLHvm0
Rostro-dorso kateral hypothalamic areaipsiRDLH3
Tuberal nucleusipsiTU0
Anterior hypothalamic areaipsiAHA0
Anterior hypothalamic area dorsal partipsiAHAd1
Anteroventral periventricular nucleus [Anterior hypothalamic area]ipsiAVPe0
Anterior hypothalamic nucleusipsiAHn0
Area periventricularis hypothalamica communis [Regio hypothalamus caudalis]ipsiPeRHC0
Dorsal hypothalamic areaipsiDA0
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM2
Dorsomedial hypothalamic nucleus ventral partipsiDMV0
Dorsomedial lateral hypothalamic areaipsiDMLh1
Parastriatal nucleusipsiPS2
Posterior hypothalamic nucleusipsiPH0
Subparaventricular zoneipsiSuPZ0
Ventromedial hypothalamic nucleusipsiVMH0
Ventromedial hypothalamic nucleus dorsomedial partipsiVMHDM0
Ventromedial hypothalamic nucleus ventrolateral partipsiVMHVL0
Anterior periventricular nucleusipsiPeA0
Arcuate nucleusipsiArc0
Paraventricular hypothalamic nucleus descending divisionipsiPVHd0
Paraventricular hypothalamic nucleus lateral magnocellular part [Periventricular zone anterior region]ipsiPaLM1
Posterior magnocellular subdivision of the paraventricular hypothalamic nucleusipsiPaPoM1
Paraventricular hypothalamic nucleus parvicellular division dorsal partipsiPaPcD1.5
Paraventricular hypothalamic nucleus lateral parvocellular partipsiLPPa1
Paraventricular hypothalamic nucleus medial parvocellular partipsiMPPa1
Paraventricular hypothalamic nucleus anterior parvicellular part [Periventricular zone anterior region]ipsiPaAP1
Paraventricular nucleus of the hypothalamus magnocellular division anterior magnocellular partipsiPaAMa0
Paraventricular hypothalamic nucleusipsiPa-0.5
Paraventricular hypothalamic nucleus parvocellular divisionipsiPavPo-0.5
Paraventricular nucleus medial parvocellular partipsiPaMep0
Suprachiasmatic nucleusipsiSCh0
Supraoptic nucleus [Supraoptic region]ipsiSO0
Medial mammillary nucleusipsiMMn0
Premammillary nucleus dorsal partipsiPMD0
Premammillary nucleus ventral partipsiPMV0
Supramammillar nucleusipsiSuM0
A8 dopamine cells retrorubral groupipsiRRF3
A8 dopamine cells retrorubral group lateral partipsiRRFL3
A8 dopamine cells retrorubral group medial partipsiRRFm3
Perifornical nucleusipsiPeF1
Retrochiasmatic areaipsiRCh0.5
Tuber cinereum areaipsiTC0.5
Optic tractipsiopt-2
Medial forebrain bundleipsimfb-2
Basal nucleusipsiBnc-3
Accessory basal nucleusipsiAB-3
Accessory basal nucleus magnocellular divisionipsiABm0
Accessory basal nucleus parvicellular divisionipsiABp0
Basal nucleus intermediate divisionipsiBnci0
Basal nucleus magnocellular partipsiBmc0
Basal nucleus parvicellular partipsiBpc1
Basolateral amygdaloid nucleusipsiBL-0.5
Anterior basolateral nucleusipsiBLA0
Posterior basolateral nucleusipsiBLP0.5
Posterior basolateral nucleus caudal partipsiBLPc1
Posterior basolateral nucleus lateral partipsiBLPLP1
Posterior basolateral nucleus parvicellular subdivisionipsiBLPpc1
Basomedial amygdaloid nucleusipsiBM1
Anterior basomedial nucleusipsiBMA-0.5
Posterior basomedial nucleusipsiBMP0
Lateral amygdaloid nucleusipsiLA-3
Dorsolateral part of the lateral nucleusipsiLaDL0
Lateral nucleus medial partipsiLAM1
Ventrolateral part of the lateral nucleusipsiLaVL1
Bed nucleus of the stria terminalisipsiBST3
Bed nucleus of the stria terminalis anterior division anterolateral nucleusipsiBSTal3
Bed nucleus of the stria terminalis anterior division dorsomedial nucleusipsiBSTdm0
Bed nucleus of the stria terminalis anterior division subcommissural partipsiBSTAsc4
Bed nucleus of the stria terminalis anterior dorsal areaipsiBSTAD1
Bed nucleus of the stria terminalis anterior lateral areaipsiBSTAL3
Bed nucleus of the stria terminalis anterior medial partipsiBSTAM1
Bed nucleus of the stria terminalis fusiform partipsiFu3
Bed nucleus of the stria terminalis magnocellular nucleusipsiBSTmc0
Bed nucleus of the stria terminalis oval nucleusipsiBSTo3
Bed nucleus of the stria terminalis rhomboid nucleusipsiBSTrh1
Bed nucleus of the stria terminalis intermediate divisionipsiBSTI-0.5
Bed nucleus of the stria terminalis juxtacapsular partipsiBSTj0
Bed nucleus of the stria terminalis lateral divisionipsiBSTL3
Bed nucleus of the stria terminalis lateral division dorsal partipsiBSTLD-0.5
Bed nucleus of the stria terminalis lateral division juxtacapsular partipsiBSTLJ-0.5
Bed nucleus of the stria terminalis lateral division posterior partipsiBSTLP2
Bed nucleus of the stria terminalis lateral division ventral partipsiBSTLV3
Anterolateral subnulceus of the ventrolateral bed nucleus of the stria terminalisipsiBSTALVL2.5
Fusiform subnucleus of the ventrolateral bed nucleus of the stria terminalisipsiBSTFuVL2.5
Bed nucleus of the stria terminalis medial divisionipsiBSTM1
Bed nucleus of the stria terminalis medial division anterior partipsiBSTMA-0.5
Bed nucleus of the stria terminalis medial division posterior partipsiBSTMP1
Bed nucleus of the stria terminalis posterior divisionipsiBSTP3
Bed nucleus of the stria terminalis dorsal nucleusipsiBSTd0
Bed nucleus of the stria terminalis interfascicular nucleusipsiBSTif0
Bed nucleus of the stria terminalis posterior division cell-sparse zoneipsiBSTsz0
Bed nucleus of the stria terminalis posterior division striatal extensionipsiBSTse0
Bed nucleus of the stria terminalis posterior division ventral nucleusipsiBSTV3
Bed nucleus of the stria terminalis premedullary nucleusipsiBSTpm0
Bed nucleus of the stria terminalis principal nucleusipsiBSTpr0
Bed nucleus of the stria terminalis transverse nucleusipsiBSTt0
Bed nucleus of the stria terminalis rostral partipsiBSTro-0.5
Bed nucleus of the stria terminalis ventral partipsiBNSTv3
Central amygdaloid nucleusipsiCe1.5
Capsule like area surrounding central amygdaloid nucleusipsiCec1
Central amygdaloid nucleus intermediate divisionipsiCeI1.5
Central amygdaloid nucleus lateral divisionipsiCeL3
Central amygdaloid nucleus lateral division capsular partipsiCeC2
Central amygdaloid nucleus lateral division ventral partipsiCeCv-0.5
Rostrocaudal extent of the central amygdaloid nucleus lateral division medial partipsiCeLmrc1
Central amygdaloid nucleus medial divisionipsiCeM4
Sublenticular extended amygdalaipsiSLEA-0.5
Central division of sublenticular extended amygdalaipsiSLEAc-0.5
Amygdalopiriform transition areaipsiAPir1
Anterior amygdaloid areaipsiAA1
Anterior amygdaloid area dorsal partipsiAAD-0.5
Cortical amygdaloid nucleusipsiCAn-0.5
Anterior cortical amygdaloid nucleusipsiACo1
Posterior amygdaloid nucleus medial partipsiCOApm0
Posterior amygdaloid nucleusipsiCOAp0
Posterolateral cortical nucleusipsiPLCo0
Nucleus of the lateral olfactory tractipsiLOT0
Periamygdaloid complexipsiPAC1
Periamygdaloid complex medial divisionipsiPACm0
Periamygdaloid complex sulcal divisionipsiPACs0
Medial amygdaloid nucleusipsiMe1
Medial amygdaloid nucleus anterodorsal partipsiMeAD0
Medial amygdaloid nucleus anteroventral partipsiMeAV0
Medial amygdaloid nucleus caudal partipsiMeC0
Medial amygdaloid nucleus central dorsal partipsiMeCD0
Medial amygdaloid nucleus central ventral partipsiMeCV0
Medial amygdaloid nucleus posteroventral partipsiMePV0
Medial amygdaloid nucleus rostral partipsiMeRo0
Amygdalohippocampal areaipsiAHi-3
Amygdalohippocampal area lateral partipsiAHilp0
Amygdalohippocampal area medial partipsiAHimp0
Bed nucleus of the accessory olfactory tractipsiBAOT0
Posteromedial cortical nucleusipsiPMCo-0.5
Intercalated nuclei of the amygdalaipsiI0
Lateral globus pallidusipsiLGP1
StriatumipsiSTR-0.5
Accumbens nucleus shellipsiAcbSh1.5
Caudal accumbensipsiAcbCa1
Ventromedial striatumipsiCPuvm-0.5
Fundus of the striatumipsiFS1
Subthalamic nucleusipsiSTh-0.5
Subiculum ventral partipsiSv-0.5
Lateral entorhinal cortex ventral partipsiVLEA3
Lateral entorhinal cortex ventromedial partipsiVMEAL1
Postpiriform transition areaipsiTR1
Anterior cingulate cortexipsiACC-0.5
Frontal cortex area 3ipsiFr31
Agranular insular cortex ventral partipsiAIV-0.5
Anterior commissureipsiac0
Genioglossus musclecontraMuscGenioG2
Musculus massetercontraMuscMass1
Inferior pharyngeal constrictor musclecontraMusciPC0.5
Posterior cricoarytenoid musclecontraMuscPCA0.5
Thyroarytenoid musclecontraMuscTAr0.5
Genioglossus muscleipsiMuscGenioG2
Musculus masseteripsiMuscMass2
Inferior pharyngeal constrictor muscleipsiMusciPC2
Posterior cricoarytenoid muscleipsiMuscPCA2
Thyroarytenoid muscleipsiMuscTAr2

Input from

NameSideAbbr.WeightDetails
Central gray mesencephalic partcontraCGM-1
Locus coeruleuscontraLC1
Parabrachial nucleuscontraPB-1
Parabrachial nucleus lateral crescentcontraPBlc1.5
Parabrachial nucleus caudal partcontraPBca1
Parabrachial nucleus central lateral partcontraPBCeL1
Parabrachial nucleus external divison lateral partcontraPBeDL1
Parabrachial nucleus external divison medial partcontraPBeDM-0.5
Parabrachial nucleus medialcontraPBnMe-0.5
Parabrachial nucleus medial crescentcontraPBmc0.5
Parabrachial nucleus ventral part lateral portioncontraPBVL1.5
Parabrachial nucleus waist partcontraPBW0.5
Dorsomedial portion of the lateral reticular nucleuscontraLRtDM-0.5
Lateral reticular nucleus ventromedial partcontraLRtvm-0.5
Nucleus of the solitary tractcontraSol0.5
Nucleus of the solitary tract dorsal part level 2contraSolDLe2-0.5
Nucleus of the solitary tract medial partcontraSolM0.5
Nucleus of the solitary tract medial part level 1contraSolMLe1-0.5
Nucleus of the solitary tract ventrolateral part level 1contraSolVLLe1-0.5
Nucleus of the solitary tract level 3contraSolLe3-0.5
Ventral lateral medulla oblongatacontraMVL1
Caudal ventrolateral medullacontraCVLM-0.5
Ventral lateral medulla oblongata level 1contraMVLeL11
Ventral lateral medulla oblongata level 2contraMVLeL21.5
Ventral lateral medulla oblongata level 3contraMVLeL31.5
Lateral paragigantocellular nucleus ventrolateral partcontraLPGiVL-0.5
Lateral paragigantocellular nucleus medial partcontraLPGiM-0.5
Lateral hypothalamic areacontraLH-1
Perifornical nucleuscontraPeF-1
Paraventricular thalamic nucleuscontraPV-1
Basal nucleus intermediate divisioncontraBnci1
Prelimbic cortexcontraPrL0.5
Central gray mesencephalic partipsiCGM-1
Central gray pons partipsiCGP1
Ventral periaqueductal grayipsiVPAG-1
Ventrolateral periaqueductal grayipsiVLPAG-1
Peripeduncular areaipsiPPA-0.5
Peripeduncular nucleusipsiPP1
Interstitial nucleus of CajalipsiInC-0.5
Locus coeruleusipsiLC-0.5
Locus coeruleus middle partipsiLCmi-0.5
Pericoerulear regionipsiPCR0.5
Prelocus coeruleus nucleusipsiPLC3
Pontine reticular nucleusipsiPRN3
Parabrachial nucleusipsiPB1
Central medial parabrachial nucleus waistipsiCMPBw2
Lateral parabrachial nucleusipsiLPB3
Lateral parabrachial nucleus central partipsiLPBC-0.5
Lateral parabrachial nucleus dorsal partipsiLPBD-0.5
Lateral parabrachial nucleus external partipsiLPBE3
Lateral parabrachial nucleus ventral partipsiLPBV2
Parabrachial nucleus lateral crescentipsiPBlc3
Parabrachial nucleus caudal partipsiPBca3
Parabrachial nucleus central lateral partipsiPBCeL3
Parabrachial nucleus external divisonipsiPBeD-0.5
Parabrachial nucleus external divison lateral partipsiPBeDL3
Parabrachial nucleus external divison rostral part of the lateral partipsiPBeDLR3
Parabrachial nucleus external divison medial partipsiPBeDM-0.5
Parabrachial nucleus medialipsiPBnMe1
Medial parabrachial nucleus external partipsiMPBE0
Parabrachial nucleus medial crescentipsiPBmc1
Parabrachial nucleus ventral part lateral portionipsiPBVL3
Parabrachial nucleus waist partipsiPBW1
Lateral reticular nucleusipsiLRt1
Subcoeruleus nucleusipsiSubC-0.5
Subcoeruleus nucleus dorsal partipsiSubCD1
C3 adrenaline cellsipsiC30.5
Area postremaipsiAP1
Supratrigeminal nucleusipsiSu53
Mesencephalic trigeminal nucleusipsiMe53
Trigeminal subnucleus caudalisipsi5SSC1
Nucleus of the solitary tractipsiSol1
11 beta hydroxysteroiddehydrogenase type-2 cellsipsiSolHSD21
Nucleus of the solitary tract commissural partipsiSolC1
Nucleus of the solitary tract dorsal part level 2ipsiSolDLe23
Nucleus of the solitary tract medial partipsiSolM1
Nucleus of the solitary tract medial part level 1ipsiSolMLe12
Nucleus of the solitary tract rostral partipsiSolro0.5
Nucleus of the solitary tract ventrolateral part level 1ipsiSolVLLe12
Nucleus of the solitary tract level 3ipsiSolLe31.5
Dorsal raphe nucleusipsiDR-1
Dorsal raphe nucleus dorsomedial subdivisionipsiDRdm3
Ventral lateral medulla oblongataipsiMVL0.5
Caudal ventrolateral medullaipsiCVLM-0.5
Ventral lateral medulla oblongata level 1ipsiMVLeL11
Ventral lateral medulla oblongata level 2ipsiMVLeL21.5
Ventral lateral medulla oblongata level 3ipsiMVLeL31.5
Lateral paragigantocellular nucleusipsiLPGi1
Endopiriform systemipsiEnN1
Caudal endopiriform regionipsiCEn-0.5
Dorsal endopiriform nucleusipsiDEn1
Nucleus of the horizontal limb of the diagonal bandipsiHDB-1
Nucleus of the vertical limb of the diagonal bandipsiVDB-1
Medial septal nucleusipsiMS-1
Substantia innominata sublenticular partipsiSIS-1
Juxtaparaventricular part caudal [Lateral hypothalamic area [Preoptic anterior region]]ipsiJPVC0
Juxtaparaventricular part rostral [Lateral hypothalamic area [Preoptic anterior region]]ipsiJPVR0
Lateral hypothalamic area anterior part [Preoptic anterior region]ipsiLHAapar0
Lateral hypothalamic area posterior part [Preoptic anterior region]ipsiLHApPAR0
Lateral hypothalamic area premammillary subfornical region [Preoptic anterior region]ipsiLHAsfp0
Region of tuber cinereumipsiTCReg-1
Lateral hypothalamic areaipsiLH3
Lateral hypothalamic area anterior partipsiLHAa1
Lateral hypothalamic area juxtadorsomedial regionipsiJDM0
Lateral hypothalamic area motor related juxtaventromedial regionipsiLHAjvm0
Lateral hypothalamic area subfornical region anterior zoneipsiLHAsfa0
Lateral hypothalamic area perifornical partipsiPFx3
Lateral hypothalamic area posterior partipsiLHAp-0.5
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM3
Dorsomedial hypothalamic nucleus dorsomedial partipsiDMDM3
Ventromedial hypothalamic nucleusipsiVMH-1
Arcuate nucleusipsiArc1
Paraventricular hypothalamic nucleusipsiPa-0.5
Supraoptic nucleus retrochiasmatic partipsiSOR-0.5
Premammillary nucleus ventral partipsiPMV-0.5
Supramammillar nucleusipsiSuM-1
Perifornical nucleusipsiPeF-0.5
ThalamusipsiT0
Parafascicular thalamic nucleusipsiPF1
Posterior limitans thalamic nucleusipsiPLi1
Posterior thalamic nuclear groupipsiPo2
Suprageniculate thalamic nucleusipsiSG-0.5
Midline group of the dorsal thalamusipsiMTN-1
Paratenial thalamic nucleusipsiPT-0.5
Paraventricular thalamic nucleusipsiPV1
Paraventricular thalamic nucleus anterior partipsiPVA-0.5
Paraventricular thalamic nucleus posterior partipsiPVP0.5
Reuniens thalamic nucleus posterior partipsiReP-0.5
Ventral posteromedial thalamic nucleusipsiVPM-1
Ventral posteromedial thalamic nucleus parvicellular partipsiVPMpc-1
Lateral posterior thalamic nucleus posterior part dorsomedial areaipsiLPPdm-0.5
Subparafascicular thalamic nucleusipsiSPF2
Lateral subparafascicular thalamic nucleusipsiSPFL2
Dorsal bank of rhinal fissureipsiDBrf0.5
Basal nucleusipsiBnc-3
Accessory basal nucleusipsiAB-3
Accessory basal nucleus magnocellular divisionipsiABm1
Accessory basal nucleus parvicellular divisionipsiABp1
Basal nucleus intermediate divisionipsiBnci1
Basal nucleus magnocellular partipsiBmc1
Basal nucleus parvicellular partipsiBpc1
Basolateral amygdaloid nucleusipsiBL-1
Anterior basolateral nucleusipsiBLA1
Posterior basolateral nucleusipsiBLP2
Anterior basomedial nucleusipsiBMA2
Posterior basomedial nucleusipsiBMP1
Lateral amygdaloid nucleusipsiLA1
Dorsolateral part of the lateral nucleusipsiLaDL1
Lateral nucleus medial partipsiLAM1
Ventrolateral part of the lateral nucleusipsiLaVL0
Bed nucleus of the stria terminalis anterior division anterolateral nucleusipsiBSTal2
Bed nucleus of the stria terminalis anterior division dorsomedial nucleusipsiBSTdm0.5
Bed nucleus of the stria terminalis anterior division subcommissural partipsiBSTAsc0
Bed nucleus of the stria terminalis anterior medial partipsiBSTAM1
Bed nucleus of the stria terminalis fusiform partipsiFu1
Bed nucleus of the stria terminalis magnocellular nucleusipsiBSTmc0
Bed nucleus of the stria terminalis oval nucleusipsiBSTo2
Bed nucleus of the stria terminalis rhomboid nucleusipsiBSTrh2
Bed nucleus of the stria terminalis intraamygdaloid divisionipsiBSTIA-0.5
Bed nucleus of the stria terminalis juxtacapsular partipsiBSTj0
Bed nucleus of the stria terminalis lateral division dorsal partipsiBSTLD-0.5
Bed nucleus of the stria terminalis lateral division ventral partipsiBSTLV2
Bed nucleus of the stria terminalis dorsal nucleusipsiBSTd0
Bed nucleus of the stria terminalis interfascicular nucleusipsiBSTif0
Bed nucleus of the stria terminalis posterior division ventral nucleusipsiBSTV0.5
Bed nucleus of the stria terminalis principal nucleusipsiBSTpr0
Bed nucleus of the stria terminalis transverse nucleusipsiBSTt0
Supracapsular bed nucleus of the stria terminalis lateral partipsiBSTSl-1
Central amygdaloid nucleusipsiCe-1
Central amygdaloid nucleus intermediate divisionipsiCeI1
Central amygdaloid nucleus lateral divisionipsiCeL3
Central amygdaloid nucleus lateral division capsular partipsiCeC1
Central amygdaloid nucleus lateral division medial partipsiCeLm-1
Central amygdaloid nucleus medial divisionipsiCeM1
Interstitial nucleus of the posterior limb of the anterior commissure medial partipsiIPACM0
Amygdalopiriform transition areaipsiAPir3
Amygdalopiriform transition area lateral partipsiAPirLP2
Amygdalopiriform transition area medial part caudal aspectipsiAPirMc0.5
Amygdalopiriform transition area medial part rostral aspectipsiAPirMr2
Anterior amygdaloid areaipsiAA-0.5
Anterior cortical amygdaloid nucleusipsiACo1
Posterior amygdaloid nucleus medial partipsiCOApm0
Posterior amygdaloid nucleusipsiCOAp2
Posterolateral cortical nucleusipsiPLCo0
Nucleus of the lateral olfactory tractipsiLOT-3
Periamygdaloid complexipsiPAC-3
Periamygdaloid complex medial divisionipsiPACm-3
Periamygdaloid complex sulcal divisionipsiPACs0.5
Medial amygdaloid nucleusipsiMe-3
Medial amygdaloid nucleus anterodorsal partipsiMeAD1
Medial amygdaloid nucleus anteroventral partipsiMeAV3
Medial amygdaloid nucleus caudal partipsiMeC0
Medial amygdaloid nucleus central dorsal partipsiMeCD0
Medial amygdaloid nucleus central ventral partipsiMeCV0
Medial amygdaloid nucleus posterodorsal partipsiMePD0
Medial amygdaloid nucleus posteroventral partipsiMePV-0.5
Medial amygdaloid nucleus rostral partipsiMeRo-3
Amygdalohippocampal areaipsiAHi-3
Amygdalohippocampal area lateral partipsiAHilp1
Amygdalohippocampal area medial partipsiAHimp0
Bed nucleus of the accessory olfactory tractipsiBAOT-3
Intercalated nuclei of the amygdalaipsiI-3
Globus pallidusipsiGP-1
Ventral pallidumipsiVP-1
Parasubthalamic nucleusipsiPSTh2
SubiculumipsiS1
Intermediate subiculum ventral partipsiSivp0.5
Subiculum ventral partipsiSv0.5
Parietal rhinal cortexipsiPaRH3
Amygdaloentorhinal transitional field 6ipsiAE2
Rostral dorsolateral entorhinal areaipsirDLEA1
Rostral lateral entorhinal cortexipsiEntRoL-0.5
Lateral entorhinal cortexipsiLEnt0
Ventral intermediate entorhinal cortexipsiVIEnt0.5
Piriform cortexipsiPir1
Postpiriform transition areaipsiTR3
Anterior cingulate cortexipsiACC0.5
Prelimbic cortexipsiPrL2.5
Prelimbic cortex anterior partipsiPrLa3
Prelimbic cortex posterior partipsiPrLP2
Infralimbic cortexipsiIL3
Posterior infralimbic cortexipsiILP2.5
Infralimbic cortex anterior partipsiILAn1.5
Temporal association area 2ipsiTe21.5
Insular cortexipsiICX4
Agranular insular cortexipsiAI4
Agranular insular cortex anterior partipsiAIA3
Agranular insular cortex caudal partipsiAIC1.5
Agranular insular cortex dorsal partipsiAID1
Posterior part of the agranular insular cortex dorsal partipsiAIDP-0.5
Agranular insular cortex posterior partipsiAIP3
Agranular insular cortex posterior part caudal portionipsiAIPc2
Agranular insular cortex posterior part dorsal partipsiAIPpd3
Ventral part of the agranular posterior insular cortexipsiAIPV1.5
Agranular insular cortex rostral partipsiRAIC2
Agranular insular cortex middle partipsiAImi3
Anterior insular cortexipsiICXa-0.5
Dysgranular insular cortexipsiDI3
Gustatory dysgranular insular cortexipsiDIg4
Gustatory dysgranular insular cortex deep layersipsiDIgLD0
Gustatory dysgranular insular cortex layer 5ipsiDIgL52
Gustatory dysgranular insular cortex layer 6ipsiDIgL62
Gustatory dysgranular insular cortex layer 2ipsiDIgL23
Visceral dysgranular insular cortexipsiDIv4
Visceral dysgranular insular cortex layer 2ipsiDIvL21
Visceral dysgranular insular cortex layer 3ipsiDIvL31
Deep layers of the dysgranular insular cortexipsiDIvDL3
Granular insular cortexipsiGI2
Granular insular cortex caudal partipsiGIC1.5
Perirhinal cortex dorsal portionipsiPRhd0
Dorsal peduncular cortexipsiDP1
Medial prefrontal cortexipsimPFC1
Medial agranular prefrontal cortexipsiAGm2
Secondary visual cortexipsiV2-1
Orbital cortexipsiOrC0.5
Subcommissural nucleusipsiSCom1
Medial geniculate nucleusipsiMG1
Medial geniculate nucleus dorsal partipsiMGD-1
Medial geniculate nucleus dorsal part medial subdivisionipsiMGDm-1
Medial geniculate nucleus posterior partipsiMGp-0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





Homepage | Staff | neuroVIISAS | Rat connectome | Other connectomes | Neuroimaging | Neurodegeneration | Students | Links | Publications