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Rat connectome



A2 noradrenergic cells left


Abbreviation
A2
Color       
Superior regionsNoradrenalin cell group

SynonymsAbbr.Language
A2 cell group  
A2 noradrenergic cellsA2Eng

Output to

NameSideAbbr.WeightDetails
Ventrolateral periaqueductal grayipsiVLPAG3
Red nucleusipsiR0.5
Superior colliculusipsiSC0
Substantia nigra A9ipsiSN4
Ventral tegmental area A10 caudomedial partipsiVTACM0
Interfascicular nucleusipsiIF0.5
Ventral tegmental area A10 medial partipsiVTAM2
A5 noradrenaline cellsipsiA53
Locus coeruleusipsiLC0
Parabrachial nucleusipsiPB-0.5
Medial trapezoid nucleusipsiMTz0
Ventral nucleus of the trapezoid bodyipsiVNTB0
Ambiguus nucleusipsiAmb3
Area postremaipsiAP0.5
Facial nucleusipsi70
Motor trigeminal nucleusipsiMo50
Nucleus of the solitary tractipsiSol-0.5
Nucleus of the solitary tract medial partipsiSolM1
Dorsal raphe nucleusipsiDR-0.5
Rostral linear nucleus of the rapheipsiRLi2
Central raphe nucleusipsiCRN2
Raphe magnus nucleusipsiRMg-0.5
A1 noradrenergic cellsipsiA1-0.5
Lateral superior oliveipsiLSO0
Superior paraolivary nucleusipsiSPO0
Rostral part of the ventromedial medulla oblongataipsiRMeObvm1
Diagonal band of BrocaipsiDBB2
Nucleus of the horizontal limb of the diagonal bandipsiHDB2
Medial septal nucleusipsiMS2
Substantia innominataipsiSI1
Medial preoptic areaipsiMPA4
Ventrolateral subdivision of the medial preoptic areaipsiMPAVL-0.5
Lateral preoptic nucleusipsiLPN0
Magnocellular preoptic nucleusipsiMCPO1
Ventrolateral preoptic nucleusipsiVLPO0
Lateral margin of the lreoptic nucleusipsiPREnLM-0.5
Preoptic region rostral partipsiPREOr-0.5
Tuberomammillary nucleus dorsomedial partipsiTBMdm-0.5
Ventral tuberomammillary nucleusipsiVTM-0.5
Glia limitans ventral to the ventral tuberomammillary nucleusipsiTuMgL-0.5
DiencephalonipsiDEC-0.5
Dorsomedial hypothalamic nucleusipsiDMHy-0.5
Lateral hypothalamic area perifornical partipsiPFx-0.5
Lateral hypothalamic nucleusipsiLHN0.5
Lateral hypothalamus adjacent to the ventral tuberomammillary nucleusipsiLHVTM-0.5
Anterior hypothalamic areaipsiAHA-0.5
Anteroventral periventricular nucleus [Anterior hypothalamic area]ipsiAVPe0
Dorsomedial hypothalamic areaipsiDMHyA1
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM3
Subparaventricular zoneipsiSuPZ3
Medial basal hypothalamusipsiMBH-0.5
Ventromedial hypothalamic nucleusipsiVMH1
Arcuate nucleusipsiArc1
Paraventricular hypothalamic nucleus medial parvicellular part [Periventricular zone anterior region]ipsiPaMP3
Paraventricular hypothalamic nucleus anterior parvicellular part [Periventricular zone anterior region]ipsiPaAP-0.5
Paraventricular hypothalamic nucleusipsiPa3
Mid paraventricular hypothalamic nucleusipsiMiPa2
Paraventricular hypothalamic nucleus magnocellular divisionipsiPaMag2.5
Paraventricular hypothalamic nucleus magnocellular division posterior partipsiPaMagP1
Paraventricular hypothalamic nucleus parvocellular divisionipsiPavPo3
Paraventricular hypothalamic nucleus dorsal parvocellular divisionipsiPavPoD-0.5
Paraventricular nucleus lateral parvocellular partipsiPaLp-0.5
Paraventricular nucleus medial parvocellular partipsiPaMep-0.5
Paraventricular nucleus medial parvicellular part dorsal zoneipsiPVHmpdo3
Paraventricular hypothalamic nucleus periventricular partipsiPapv-0.5
Periventricular hypothalamic nucleusipsiPe1
Supraoptic nucleus [Supraoptic region]ipsiSO3
Episupraoptic nucleusipsiESO0
Supraoptic nucleus dorsal partipsiSOd3
Supraoptic nucleus ventral part [Supraoptic region]ipsiSOV-0.5
Area immediately surrounding the supraoptic nucleusipsiSOsur-0.5
Lateral mammillary nucleusipsiLM-0.5
Premammillary nucleus dorsal partipsiPMD-0.5
Premammillary nucleus ventromedial partipsiPMvm-0.5
Supramammillar nucleus lateral partipsiSuML-0.5
A8 dopamine cells retrorubral groupipsiRRF3
A8 dopamine cells retrorubral group medial partipsiRRFm0.5
Retrochiasmatic areaipsiRCh1
Reuniens thalamic nucleus most ventral partipsiRemV3
Area between stria teminalis and internal capsuleipsistic-0.5
Medial forebrain bundleipsimfb-2
Stria medullaris of the thalamusipsism0
Bed nucleus of the stria terminalisipsiBST-0.5
Bed nucleus of the stria terminalis anterior dorsal areaipsiBSTAD3
Bed nucleus of the stria terminalis anterior ventral areaipsiBSTAV-0.5
Bed nucleus of the stria terminalis lateral division ventral partipsiBSTLV-0.5
Bed nucleus of the stria terminalis dorsal nucleusipsiBSTd-0.5
Bed nucleus of the stria terminalis principal nucleusipsiBSTpr0
Bed nucleus of the stria terminalis rostral partipsiBSTro-0.5
Bed nucleus of the stria terminalis ventral partipsiBNSTv3
Central amygdaloid nucleusipsiCe2
Medial amygdaloid nucleus posterodorsal partipsiMePD-0.5
Amygdaloid intramedullary grayipsiIMG-0.5
Amygdalostriatal transition areaipsiAStr-0.5
Intercalated massesipsiIM-0.5
Accumbens nucleus coreipsiAcbC-0.5
Accumbens nucleus shellipsiAcbSh-0.5
Caudal accumbens nucleus shellipsiAcbShC3
Caudate putamenipsiCPu-0.5
Ventral striatumipsiCPuv-0.5
Cerebral cortexipsiCEC-0.5
Fornixipsif-2
Anterior commissureipsiac3
Olfactory bulb A16ipsiMOB-0.5
Olfactory tubercleipsiTuO-0.5
Lateral septal nucleusipsiLS2
Ventrolateral septal regionipsiVLSER-0.5
Spinal cordipsiMES-0.5
Spinal cord layer 3 C4ipsiSCL3C41
Spinal cord layer 4 C4ipsiSCL4C41
Spinal cord layer 1 C4ipsiSCL1C41
Spinal cord layer 2 C4ipsiSCL2C41
Spinal cord layer 3 C5ipsiSCL3C51
Spinal cord layer 4 C5ipsiSCL4C51
Spinal cord layer 1 C5ipsiSCL1C51
Spinal cord layer 2 C5ipsiSCL2C51
Spinal cord layer 3 C6ipsiSCL3C61
Spinal cord layer 4 C6ipsiSCL4C61
Spinal cord layer 1 C6ipsiSCL1C61
Spinal cord layer 2 C6ipsiSCL2C61
Spinal cord layer 3 C7ipsiSCL3C71
Spinal cord layer 4 C7ipsiSCL4C71
Spinal cord layer 1 C7ipsiSCL1C71
Spinal cord layer 2 C7ipsiSCL2C71
Thoracal segment 2ipsiT21
Spinal cord layers T2ipsiSCLT21
Thoracal segment 3ipsiT31
Thoracal segment 4ipsiT41
Thoracal segment 5ipsiT51
Intermediolateral cell column T5ipsiIMLT53
Thoracal segment 6ipsiT61
Intermediolateral cell column T6ipsiIMLT63
Thoracal segment 7ipsiT71
Intermediolateral cell column T7ipsiIMLT73
Thoracal segment 8ipsiT81
Intermediolateral cell column T8ipsiIMLT83
Thoracal segment 9ipsiT91
Intermediolateral cell column T9ipsiIMLT93
Lower thoracic spinal cordipsiTSegLo-0.5
Intermediolateral cell column T10ipsiIMLT103
Spinal cord layer 3 T13ipsiSCL3T131
Spinal cord layer 4 T13ipsiSCL4T131
Spinal cord layer 1 T13ipsiSCL1T131
Spinal cord layer 2 T13ipsiSCL2T131
Spinal cord layer 3 L1ipsiSCL3L11
Spinal cord layer 4 L1ipsiSCL4L11
Spinal cord layer 1 L1ipsiSCL1L11
Spinal cord layer 2 L1ipsiSCL2L11
Spinal cord layer 3 L2ipsiSCL3L21
Spinal cord layer 4 L2ipsiSCL4L21
Spinal cord layer 1 L2ipsiSCL1L21
Spinal cord layer 2 L2ipsiSCL2L21
Spinal cord layer 4 L3ipsiSCL4L31
Spinal cord layer 1 L3ipsiSCL1L31
Spinal cord layer 2 L3ipsiSCL2L31
Tracheal parasympathetic preganglionic neuronsipsiTPPN3
Ventrolateral periaqueductal graycontraVLPAG1
Red nucleuscontraR0
Substantia nigra A9contraSN1
Ventral tegmental area A10 caudomedial partcontraVTACM0
Interfascicular nucleuscontraIF0.5
Ventral tegmental area A10 medial partcontraVTAM2
Parabrachial nucleuscontraPB0.5
Nucleus of the solitary tractcontraSol-0.5
Rostral linear nucleus of the raphecontraRLi2
Central raphe nucleuscontraCRN2
Diagonal band of BrocacontraDBB-0.5
Medial septal nucleuscontraMS-0.5
Medial preoptic areacontraMPA2
Preoptic region rostral partcontraPREOr-0.5
Tuberomammillary nucleus dorsomedial partcontraTBMdm-0.5
Ventral tuberomammillary nucleuscontraVTM-0.5
Glia limitans ventral to the ventral tuberomammillary nucleuscontraTuMgL-0.5
Dorsomedial hypothalamic nucleuscontraDMHy-0.5
Lateral hypothalamus adjacent to the ventral tuberomammillary nucleuscontraLHVTM-0.5
Anteroventral periventricular nucleus [Anterior hypothalamic area]contraAVPe0
Ventromedial hypothalamic nucleuscontraVMH1
Arcuate nucleuscontraArc1
Paraventricular hypothalamic nucleus anterior parvicellular part [Periventricular zone anterior region]contraPaAP-0.5
Paraventricular hypothalamic nucleuscontraPa-0.5
Paraventricular hypothalamic nucleus magnocellular divisioncontraPaMag-0.5
Paraventricular hypothalamic nucleus magnocellular division posterior partcontraPaMagP1
Paraventricular hypothalamic nucleus parvocellular divisioncontraPavPo-0.5
Paraventricular hypothalamic nucleus dorsal parvocellular divisioncontraPavPoD-0.5
Paraventricular nucleus lateral parvocellular partcontraPaLp-0.5
Paraventricular nucleus medial parvicellular part dorsal zonecontraPVHmpdo-0.5
Paraventricular hypothalamic nucleus periventricular partcontraPapv-0.5
Supraoptic nucleus [Supraoptic region]contraSO-0.5
Supraoptic nucleus dorsal partcontraSOd-0.5
Supraoptic nucleus ventral part [Supraoptic region]contraSOV-0.5
Area immediately surrounding the supraoptic nucleuscontraSOsur-0.5
Lateral mammillary nucleuscontraLM-0.5
Premammillary nucleus dorsal partcontraPMD-0.5
Premammillary nucleus ventromedial partcontraPMvm-0.5
Supramammillar nucleus lateral partcontraSuML-0.5
A8 dopamine cells retrorubral groupcontraRRF0.5
A8 dopamine cells retrorubral group medial partcontraRRFm0
Retrochiasmatic areacontraRCh0
Medial forebrain bundlecontramfb-2
Stria medullaris of the thalamuscontrasm0
Area between stria teminalis and internal capsulecontrastic-0.5
Bed nucleus of the stria terminaliscontraBST1
Bed nucleus of the stria terminalis anterior dorsal areacontraBSTAD-0.5
Bed nucleus of the stria terminalis dorsal nucleuscontraBSTd-0.5
Bed nucleus of the stria terminalis rostral partcontraBSTro-0.5
Bed nucleus of the stria terminalis ventral partcontraBNSTv0.5
Fornixcontraf0
Anterior commissurecontraac-0.5
Ventrolateral septal regioncontraVLSER-0.5
Spinal cord layer 3 C4contraSCL3C41
Spinal cord layer 4 C4contraSCL4C41
Spinal cord layer 1 C4contraSCL1C41
Spinal cord layer 2 C4contraSCL2C41
Spinal cord layer 3 C5contraSCL3C51
Spinal cord layer 4 C5contraSCL4C51
Spinal cord layer 1 C5contraSCL1C51
Spinal cord layer 2 C5contraSCL2C51
Spinal cord layer 3 C6contraSCL3C61
Spinal cord layer 4 C6contraSCL4C61
Spinal cord layer 1 C6contraSCL1C61
Spinal cord layer 2 C6contraSCL2C61
Spinal cord layer 3 C7contraSCL3C71
Spinal cord layer 4 C7contraSCL4C71
Spinal cord layer 1 C7contraSCL1C71
Spinal cord layer 2 C7contraSCL2C71
Spinal cord layer 3 T13contraSCL3T131
Spinal cord layer 4 T13contraSCL4T131
Spinal cord layer 1 T13contraSCL1T131
Spinal cord layer 2 T13contraSCL2T131
Spinal cord layer 3 L1contraSCL3L11
Spinal cord layer 4 L1contraSCL4L11
Spinal cord layer 1 L1contraSCL1L11
Spinal cord layer 2 L1contraSCL2L11
Spinal cord layer 3 L2contraSCL3L21
Spinal cord layer 4 L2contraSCL4L21
Spinal cord layer 1 L2contraSCL1L21
Spinal cord layer 2 L2contraSCL2L21
Spinal cord layer 4 L3contraSCL4L31
Spinal cord layer 1 L3contraSCL1L31
Spinal cord layer 2 L3contraSCL2L31
Parotid glandipsiOrgParG-10
Genioglossus muscleipsiMuscGenioG-0.5
Parotid glandcontraOrgParG-10
Genioglossus musclecontraMuscGenioG-0.5

Input from

NameSideAbbr.WeightDetails
Substantia nigra compact partipsiSNC-0.5
Raphe nucleiipsiRAN-0.5
Raphe magnus nucleus caudal partipsiRMgc-0.5
Raphe obscurus nucleus rostral partipsiRObr-0.5
Raphe pallidus nucleusipsiRPa-0.5
Lateral most portion of the ventrolateral medullaipsiLMVL-0.5
Rostral ventrolateral medullaipsiRVLM-0.5
A1 noradrenergic cellsipsiA1-0.5
Dorsomedial hypothalamic nucleusipsiDMHy1
Perifornical hypothalamic area [Preoptic anterior region]ipsiPFxPAR1
Lateral hypothalamic area dorsal partipsiLHd0.5
Lateral hypothalamic area ventral partipsiLHAvp0.5
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM0.5
Periventricular zoneipsiPVZ1
Medial part of the caudal perifornical areaipsiPeFCM1
Lateral part of the caudal perifornical areaipsiPeFCL1
Central amygdaloid nucleusipsiCe1
Central amygdaloid nucleus lateral divisionipsiCeL1
Central amygdaloid nucleus medial divisionipsiCeM3
Central amygdaloid nucleus medial division rostral partipsiCeMR2
Medial amygdaloid nucleus dorsal tipipsiMeDT1
Ependymocytes of 4th ventricleipsi4Vepc0.5
Dorsal horn C1ipsiDHC10.5
Spinal cord layer 3 C1ipsiSCL3C10.5
Spinal cord layer 4 C1ipsiSCL4C10.5
Spinal cord layer 1 C1ipsiSCL1C10.5
Spinal cord layer 2 C1ipsiSCL2C10.5
Dorsal horn C2ipsiDHC20.5
Spinal cord layer 3 C2ipsiSCL3C20.5
Spinal cord layer 4 C2ipsiSCL4C20.5
Spinal cord layer 1 C2ipsiSCL1C20.5
Spinal cord layer 2 C2ipsiSCL2C20.5
Dorsal horn C3ipsiDHC30.5
Spinal cord layer 3 C3ipsiSCL3C30.5
Spinal cord layer 4 C3ipsiSCL4C30.5
Spinal cord layer 1 C3ipsiSCL1C30.5
Spinal cord layer 2 C3ipsiSCL2C30.5
Dorsal horn C4ipsiDHC40.5
Spinal cord layer 3 C4ipsiSCL3C40.5
Spinal cord layer 4 C4ipsiSCL4C40.5
Spinal cord layer 1 C4ipsiSCL1C40.5
Spinal cord layer 2 C4ipsiSCL2C40.5
Dorsal horn C5ipsiDHC50.5
Spinal cord layer 3 C5ipsiSCL3C50.5
Spinal cord layer 4 C5ipsiSCL4C50.5
Spinal cord layer 1 C5ipsiSCL1C50.5
Spinal cord layer 2 C5ipsiSCL2C50.5
Dorsal horn C6ipsiDHC60.5
Spinal cord layer 3 C6ipsiSCL3C60.5
Spinal cord layer 4 C6ipsiSCL4C60.5
Spinal cord layer 1 C6ipsiSCL1C60.5
Spinal cord layer 2 C6ipsiSCL2C60.5
Dorsal horn C7ipsiDHC70.5
Spinal cord layer 3 C7ipsiSCL3C70.5
Spinal cord layer 4 C7ipsiSCL4C70.5
Spinal cord layer 1 C7ipsiSCL1C70.5
Spinal cord layer 2 C7ipsiSCL2C70.5
Dorsal horn C8ipsiDHC80.5
Spinal cord layer 3 C8ipsiSCL3C80.5
Spinal cord layer 4 C8ipsiSCL4C80.5
Spinal cord layer 1 C8ipsiSCL1C80.5
Spinal cord layer 2 C8ipsiSCL2C80.5
Dorsal horn L1ipsiDHL10.5
Spinal cord layer 3 L1ipsiSCL3L10.5
Spinal cord layer 4 L1ipsiSCL4L10.5
Spinal cord layer 1 L1ipsiSCL1L10.5
Spinal cord layer 2 L1ipsiSCL2L10.5
Dorsal horn L2ipsiDHL20.5
Spinal cord layer 3 L2ipsiSCL3L20.5
Spinal cord layer 4 L2ipsiSCL4L20.5
Spinal cord layer 1 L2ipsiSCL1L20.5
Spinal cord layer 2 L2ipsiSCL2L20.5
Dorsal horn L3ipsiDHL30.5
Spinal cord layer 3 L3ipsiSCL3L30.5
Spinal cord layer 4 L3ipsiSCL4L30.5
Spinal cord layer 1 L3ipsiSCL1L30.5
Spinal cord layer 2 L3ipsiSCL2L30.5
Dorsal horn L4ipsiDHL40.5
Spinal cord layer 3 L4ipsiSCL3L40.5
Spinal cord layer 4 L4ipsiSCL4L40.5
Spinal cord layer 1 L4ipsiSCL1L40.5
Spinal cord layer 2 L4ipsiSCL2L40.5
Dorsal horn L5ipsiDHL50.5
Spinal cord layer 3 L5ipsiSCL3L50.5
Spinal cord layer 4 L5ipsiSCL4L50.5
Spinal cord layer 1 L5ipsiSCL1L50.5
Spinal cord layer 2 L5ipsiSCL2L50.5
Dorsal horn L6ipsiDHL60.5
Spinal cord layer 3 L6ipsiSCL3L60.5
Spinal cord layer 4 L6ipsiSCL4L60.5
Spinal cord layer 1 L6ipsiSCL1L60.5
Spinal cord layer 2 L6ipsiSCL2L60.5
Spinal nociceptice neuronipsiMESnn-0.5
Lateral most portion of the ventrolateral medullacontraLMVL-0.5
Dorsomedial hypothalamic nucleuscontraDMHy-0.5
Perifornical hypothalamic area [Preoptic anterior region]contraPFxPAR-0.5
Lateral hypothalamic area dorsal partcontraLHd-0.5
Lateral hypothalamic area ventral partcontraLHAvp-0.5
Dorsomedial hypothalamic nucleus [Medial zone]contraDM-0.5
Periventricular zonecontraPVZ-0.5
Medial part of the caudal perifornical areacontraPeFCM-0.5
Lateral part of the caudal perifornical areacontraPeFCL-0.5
Dorsal horn C1contraDHC12
Spinal cord layer 3 C1contraSCL3C12
Spinal cord layer 4 C1contraSCL4C12
Spinal cord layer 1 C1contraSCL1C12
Spinal cord layer 2 C1contraSCL2C12
Dorsal horn C2contraDHC22
Spinal cord layer 3 C2contraSCL3C22
Spinal cord layer 4 C2contraSCL4C22
Spinal cord layer 1 C2contraSCL1C22
Spinal cord layer 2 C2contraSCL2C22
Dorsal horn C3contraDHC32
Spinal cord layer 3 C3contraSCL3C32
Spinal cord layer 4 C3contraSCL4C32
Spinal cord layer 1 C3contraSCL1C32
Spinal cord layer 2 C3contraSCL2C32
Dorsal horn C4contraDHC42
Spinal cord layer 3 C4contraSCL3C42
Spinal cord layer 4 C4contraSCL4C42
Spinal cord layer 1 C4contraSCL1C42
Spinal cord layer 2 C4contraSCL2C42
Dorsal horn C5contraDHC52
Spinal cord layer 3 C5contraSCL3C52
Spinal cord layer 4 C5contraSCL4C52
Spinal cord layer 1 C5contraSCL1C52
Spinal cord layer 2 C5contraSCL2C52
Dorsal horn C6contraDHC62
Spinal cord layer 3 C6contraSCL3C62
Spinal cord layer 4 C6contraSCL4C62
Spinal cord layer 1 C6contraSCL1C62
Spinal cord layer 2 C6contraSCL2C62
Dorsal horn C7contraDHC72
Spinal cord layer 3 C7contraSCL3C72
Spinal cord layer 4 C7contraSCL4C72
Spinal cord layer 1 C7contraSCL1C72
Spinal cord layer 2 C7contraSCL2C72
Dorsal horn C8contraDHC82
Spinal cord layer 3 C8contraSCL3C82
Spinal cord layer 4 C8contraSCL4C82
Spinal cord layer 1 C8contraSCL1C82
Spinal cord layer 2 C8contraSCL2C82
Dorsal horn L1contraDHL12
Spinal cord layer 3 L1contraSCL3L12
Spinal cord layer 4 L1contraSCL4L12
Spinal cord layer 1 L1contraSCL1L12
Spinal cord layer 2 L1contraSCL2L12
Dorsal horn L2contraDHL22
Spinal cord layer 3 L2contraSCL3L22
Spinal cord layer 4 L2contraSCL4L22
Spinal cord layer 1 L2contraSCL1L22
Spinal cord layer 2 L2contraSCL2L22
Dorsal horn L3contraDHL32
Spinal cord layer 3 L3contraSCL3L32
Spinal cord layer 4 L3contraSCL4L32
Spinal cord layer 1 L3contraSCL1L32
Spinal cord layer 2 L3contraSCL2L32
Dorsal horn L4contraDHL42
Spinal cord layer 3 L4contraSCL3L42
Spinal cord layer 4 L4contraSCL4L42
Spinal cord layer 1 L4contraSCL1L42
Spinal cord layer 2 L4contraSCL2L42
Dorsal horn L5contraDHL52
Spinal cord layer 3 L5contraSCL3L52
Spinal cord layer 4 L5contraSCL4L52
Spinal cord layer 1 L5contraSCL1L52
Spinal cord layer 2 L5contraSCL2L52
Dorsal horn L6contraDHL62
Spinal cord layer 3 L6contraSCL3L62
Spinal cord layer 4 L6contraSCL4L62
Spinal cord layer 1 L6contraSCL1L62
Spinal cord layer 2 L6contraSCL2L62
Spinal nociceptice neuroncontraMESnn-0.5
Stomach wallipsiOrgsStomWS-0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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