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Rat connectome



Temporal association cortex 1 right


Abbreviation
TeA
Color       
Superior regionsTemporal cortex

SynonymsAbbr.Language
Temporal association cortex 1TeAEng
Brodmann area 41  
 TE1 
 TEa 
Central part of temporal field  
Central part of temporal cortex  
Central part of temporal association cortex  
Primary auditory neocortexTE 
Area 41  
Temporal association cortexTe1Eng
Temporal cortex area 1  
Core cortex Eng
Primary auditory field Eng

SubregionsSide
Anteriorposterior part of the temporal association area 1right
Caudal part of temporal association cortex 1right
Caudobasal part of the temporal association area 1right
Dorsal temporal association cortex 1right
Dorsocaudal end of the temporal association cortex 1right
Temporal association cortex 1 caudodorsal partright
Temporal association cortex 1 core arearight
Temporal association cortex 1 dorsal fringeright
Temporal association cortex 1 dorsoventral sectorright
Temporal association cortex 1 fringeright
Temporal association cortex 1 layersright
Temporal association cortex 1 middle portionright
Temporal association cortex 1 most rostral portionright
Temporal association cortex 1 posterodorsal partright
Temporal association cortex 1 rostral partright
Temporal association cortex 1 rostroventral partright
Temporal association cortex 1 ventral partright
Ventral temporal association cortexright
Anterior part of the temporal association cortex 1right
Rostrocaudal temporal association cortex 1right

Output to

NameSideAbbr.WeightDetails
Sagulum nucleuscontraSag0.5
Central nucleus of the inferior colliculuscontraCIC0
External cortex of the inferior colliculus dorsomedial partcontraECICDM1
Intermediate part of the external cortex of the inferior colliculuscontraECICiM0
Rostrolaterally external cortex of the inferior colliculuscontraECICRL0
Rostromedial part of the external cortex of the inferior colliculuscontraECICRM1
Dorsal cortex of the inferior colliculus deep region medial partcontraDCICdm-0.5
Dorsal cortex of the inferior colliculus layer 2contraDCICL21
Ventrolateral tegmental areacontraVLTg1
Spinal vestibular nucleus rostral partcontraSpVeR0
Dorsolateral part of the lateral nucleuscontraLaDL1
Frontal association cortexcontraFrA0
Parietal cortex area 2contraPar21.5
Temporal association area 2 dorsal partcontraTe2D2
Temporal association area 3contraTe31.5
Temporal association cortex 1contraTeA3
Auditory regionscontraAU3
Agranular insular cortex posterior partcontraAIP1.5
Granular insular cortex caudal partcontraGIC0
Perirhinal cortexcontraA351.5
Secondary somatosensory cortex ventral halfcontraS2vh0
Area 17 area 18a border regioncontraVR1B2a1
Secondary visual cortex medial areacontraV2M1
Secondary visual cortex lateral areacontraV2L1
Primary visual cortex monocular areacontraV1M0
Medial geniculate nucleuscontraMG0
Horizontal cell group of the lateral lemniscusipsiHCG2
Sagulum nucleusipsiSag3
Paralemniscal nucleusipsiPL1
Medial paralemniscal nucleusipsiMPL2
Inferior colliculusipsiICOL1
Central nucleus of the inferior colliculusipsiCIC1
Dorsomedial part of the inferior colliculusipsiICOLDM3
External cortex of the inferior colliculusipsiECIC1.5
Intermediate part of the external cortex of the inferior colliculusipsiECICiM2
Rostrolaterally external cortex of the inferior colliculusipsiECICRL2
Rostromedial part of the external cortex of the inferior colliculusipsiECICRM3
Dorsal cortex of the inferior colliculus deep region medial partipsiDCICdm-0.5
Dorsal cortex of the inferior colliculus layer 3ipsiDCICL3-0.5
Medial part of the pericentral nucleus inferior colliculusipsiICOLpM-0.5
Superior colliculusipsiSC2
Ventrolateral tegmental areaipsiVLTg1
PonsipsiP-0.5
Pontine nuclei lateral partipsiBPNL2
Pontine reticular nucleus caudal partipsiPNC0
Gigantocellular reticular nucleusipsiGi0
Ventral nucleus of the trapezoid bodyipsiVNTB2
Cochlear nucleusipsiCON0
Dorsal cochlear nucleusipsiDC2
Granule cell domains of the cochlear nucleusipsiGcCON3
Ventral cochlear nucleusipsiVC2
Spinal vestibular nucleus rostral partipsiSpVeR0
Lateral superior oliveipsiLSO2
Superior olive dorsal ribbonipsiSOCd2
Laterodorsal thalamic nucleusipsiLD3
Ventral thalamusipsiVNT-0.5
Reticular thalamic nucleusipsiRt1
Reticular thalamic nucleus middle sectoripsiRtms4
Reticular thalamic nucleus ventral partipsiRtV0
Subparafascicular thalamic nucleusipsiSPF2
Zona incertaipsiZI-0.5
Zona incerta lateral partipsiZIL0
Amygdaloid complexipsiAC-3
Basolateral amygdaloid nucleusipsiBL1.5
Posterior basomedial nucleusipsiBMP1.5
Lateral amygdaloid nucleusipsiLA2
Dorsolateral part of the lateral nucleusipsiLaDL0.5
Bed nucleus of the stria terminalisipsiBST-1
Amygdalostriatal transition areaipsiAStr-0.5
Anterior part of the claustrumipsiACl2
Caudate putamenipsiCPu-0.5
Caudal striatumipsiCPuc2
Ventral striatumipsiCPuv-3
Frontal association cortexipsiFrA0
Parietal association cortexipsiPtA1
Parietal cortex posterior areaipsiParP2
Parietal cortex area 2ipsiPar23
Temporal association area 2ipsiTe22
Temporal association area 2 caudal partipsiTe2C-0.5
Temporal association area 2 dorsal partipsiTe2D3
Temporal association area 2 rostral partipsiTe2R1.5
Temporal association area 3ipsiTe33
Temporal association area 3 rostral partipsiTe3R-0.5
Temporal association area 3 ventral partipsiTe3V-3
Temporal association cortex 1ipsiTeA2
Temporal association cortex 1 fringeipsiTeAF1.5
Primary auditory cortexipsiAu12
Surrounding amygdalopetal auditory belt corticesipsiAUap-0.5
Agranular insular cortex posterior partipsiAIP3
Granular insular cortex caudal partipsiGIC3
Insular cortex posterior partipsiICXpo1.5
Perirhinal cortexipsiA353
Elbow flexion motor cortexipsiEFMCx0
Ankle dorsiflexion motor cortexipsiADFMCx1
Ankle plantar flexion motor cortexipsiAPFMCx1
Hip flexion motor cortexipsiHFMCx0
Secondary somatosensory cortexipsiS23
Secondary somatosensory cortex posterior partipsiS2Po1.5
Secondary somatosensory cortex ventral halfipsiS2vh2
Primary visual cortexipsiV12
Secondary visual cortexipsiV21.5
Secondary visual cortex mediomedial areaipsiV2MM-3
Secondary visual cortex lateral areaipsiV2L3
Ventrolateral orbital areaipsiVLO1
Medial geniculate nucleusipsiMG3
Marginal zone of medial geniculate nucleusipsiMMG3
Medial geniculate nucleus dorsal partipsiMGD2
Medial geniculate nucleus dorsal part rostral partipsiMGDro2
Medial geniculate nucleus intermediate rostral planesipsiMGirp2
Medial geniculate nucleus medial partipsiMGM1
Medial geniculate nucleus ventral partipsiMGV3
Dorsal part of medial geniculate nucleus ventral partipsiMGVD3
Medial geniculate nucleus ventral part rostral subdivisionipsiMGVr2

Input from

NameSideAbbr.WeightDetails
Peripeduncular areacontraPPA0
Temporal association area 2contraTe23
Temporal association cortex 1contraTeA3
Temporal association cortex 1 layer 5contraTeAL5-0.5
Primary auditory cortex layer 5 acontraAu1L5a3
Primary auditory cortex layer 5 bcontraAu1L5b2.5
Primary auditory cortex sublayer 3 of layer 5contraAu1L5sL32
Primary auditory cortex sublayer 4 of layer 5contraAu1L5sL41.5
Primary auditory cortex layer 5 small sized pyramidal cellscontraAu1L5sspy3
Primary auditory cortex layer 5 pyramidal cellscontraAu1L5py3
Primary auditory cortex lower half of layer 5 large pyramidal cellscontraAu1Lh5Lpy0
Lateral agranular prefrontal cortexcontraAGl0
Primary somatosensory cortexcontraS10
Secondary somatosensory cortexcontraS20
Visual regionscontraVR1
Peripeduncular areaipsiPPA0
Locus coeruleusipsiLC-0.5
Lateral reticular nucleusipsiLRt-1
Posterior hypothalamic nucleus caudal partipsiPHCa0
Posterior hypothalamic nucleus rostral partipsiPHRo1
Dorsal part of the lateral geniculate complexipsiLGd1
Rhomboid thalamic nucleusipsiRh-0.5
Suprageniculate thalamic nucleusipsiSG2
Ventro anterior thalamic nucleusipsiVA0
Ventrobasal complexipsiVB3
Posterior intralaminar thalamic nucleusipsiPIL2
Caudomedial lateral posterior thalamic nucleusipsiLPcm1
Lateral posterior thalamic nucleus caudal partipsiLPca2
Lateral posterior thalamic nucleus lateral partipsiLPTL1
Rostromedial lateral posterior thalamic nucleusipsiLPrm1.5
Ventral thalamusipsiVNT0
Zona incertaipsiZI-0.5
Ansa lenticularisipsial-2
Internal capsuleipsiic-2
Dorsal bank of rhinal fissureipsiDBrf-1
Ventral bank of the rhinal fissureipsiVBrf-1
Basolateral nucleus caudal partipsiBLCP1
Posterior basomedial nucleusipsiBMP-0.5
Anterior amygdaloid areaipsiAA3
Basal gangliaipsiBG3
Anterior part of the claustrumipsiACl1
Globus pallidusipsiGP1
Caudal globus pallidusipsiGPc1
Field CA1 of hippocampus dorsalipsiCA1d2
Field CA1 of hippocampus layer stratum pyramidaleipsiCA1pyr-0.5
Field CA1 of hippocampus ventral partipsiCA1v2
Field CA1 of hippocampus ventral layer stratum pyramidal cellsipsiCA1vL3spc-0.5
Intermediate entorhinal cortexipsiIEnt-1
Lateral entorhinal cortexipsiLEnt-1
Anterior cingulate cortexipsiACC0
Posterior cingulate cortexipsiPCC1
Prelimbic cortexipsiPrL-0.5
Infralimbic cortexipsiIL-0.5
Temporal association area 2ipsiTe23
Temporal association area 2 ventral partipsiTe2V2
Temporal association area 3ipsiTe31
Temporal association area 3 anterior partipsiTe3A2
Temporal association area 3 dorsocaudal portionipsiTe3dc-0.5
Temporal association area 3 posterior partipsiTe3P3
Temporal association area 3 rostral partipsiTe3R-0.5
Temporal association area 3 ventrocaudal portionipsiTe3vc-0.5
Temporal association cortex 1ipsiTeA2
Caudal part of temporal association cortex 1ipsiTeca2
Dorsal temporal association cortex 1ipsiTed2
Temporal association cortex 1 rostral partipsiTeAr2
Ventral temporal association cortexipsiTev2
Perirhinal cortex anterior portion layer 6ipsiPRhaL61
Perirhinal cortex caudal partipsiPRhc1
Prefrontal cortexipsiPFC-0.5
Lateral agranular prefrontal cortexipsiAGl2
Primary somatosensory cortexipsiS13
Secondary somatosensory cortexipsiS22
Secondary visual cortex lateral areaipsiV2L2
Dorsolateral orbital cortexipsiDLO-0.5
Lateral orbital cortexipsiLO-0.5
Medial orbital cortexipsiMO2
Ventral orbital cortexipsiVO3
Ventrolateral orbital areaipsiVLO-0.5
Dorsal geniculate nucleus lateral partipsiDLGl2
Lateral geniculate complexipsiLG0.5
Lateral geniculate complex medial partipsiLGm2
Medial geniculate nucleusipsiMG2
Medial geniculate nucleus caudal partipsiMGc-0.5
Medial geniculate nucleus dorsal partipsiMGD2
Medial geniculate nucleus intermediate rostral planesipsiMGirp2
Medial geniculate nucleus medial partipsiMGM2
Medial geniculate nucleus ventral partipsiMGV3
Dorsal part of medial geniculate nucleus ventral partipsiMGVD3
Medial geniculate nucleus ventral part rostral subdivisionipsiMGVr2
Ovoid subnucleusipsiOS-0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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