University of Rostock

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Rat connectome



Musculus masseter left


Abbreviation
MuscMass
Color       
Superior regionsMasticatory muscles

SynonymsAbbr.Language
Musculus masseterMuscMassLat
Masseter muscle Eng
Masseteric muscle Eng

SubregionsSide
Anterior masseter musculeleft
Muscle spindles of the masseter muscleleft
Musculus masseter superficial partleft
Posterior masseter muscleleft
Musculus masseter deep partleft

Output to

NameSideAbbr.WeightDetails
Oculomotor nucleusipsi3-0.5
Periaqueductal grayipsiPAG-10
Red nucleusipsiR-10
Central tegmental fieldipsiTGAC-10
Substantia nigra compact partipsiSNC-10
Substantia nigra reticular partipsiSNR-10
Laterodorsal tegmental nucleusipsiLDTg-10
Ventral tegmental nucleusipsiVTg-10
Pedunculopontine tegmental nucleusipsiPPTg-10
Subtegmental nucleusipsiSubT-10
A5 noradrenaline cellsipsiA5-10
Locus coeruleusipsiLC-10
Nucleus of Probsts bundleipsiNPB-10
Pontine nuclei caudal partipsiBPNc-10
Pontine nucleus oralisipsiPnOr-10
Pontine nucleus ventral partipsiBPNv-10
Prepositus nucleusipsiPr-10
Paramedian reticular nucleusipsiPMn-10
Parvicellular nucleus of the pontomedullary reticular formationipsiMPRFp0.5
Cuneiforme nucleusipsiCnF-10
Koelliker Fuse nucleusipsiKF-10
Lateral parabrachial nucleusipsiLPB-10
Parabrachial nucleus medialipsiPBnMe-10
Gigantocellular reticular nucleusipsiGi-10
Gigantocellular reticular nucleus alpha partipsiGiA-10
Gigantocellular reticular nucleus ventral partipsiGiV-10
Lateral reticular nucleusipsiLRt-10
Medullary reticular nucleus dorsal partipsiMdDd-10
Medullary reticular nucleus ventral partipsiMdV-10
Parvicellular reticular nucleusipsiPCRt-10
Facial nucleusipsi7-10
Accessory facial nucleusipsiAcs7-0.5
Facial nucleus caudal partipsi7c0.5
Hypoglossal motor nucleusipsi12M-10
Intertrigeminal nucleusipsiI5-0.5
Juxtatrigeminal areaipsiJx5-0.5
Paratrigeminal nucleusipsiPa5-10
Supratrigeminal nucleusipsiSu5-0.5
Mesencephalic trigeminal nucleusipsiMe53
Motor trigeminal nucleusipsiMo5-0.5
Motor root of the trigeminal nerveipsim50.5
Motor trigeminal nucleus dorsolateral partipsiMo5DL-0.5
Principal sensory trigeminal nucleusipsiPr5-0.5
Principal sensory trigeminal nucleus dorsomedial partipsiPr5DM-0.5
Spinal trigeminal nucleus caudal partipsiSp5C-10
Spinal trigeminal nucleus interpolar partipsiSp5I-10
Spinal trigeminal nucleus oral partipsiSp5O-10
Dorsomedial portion of the spinal trigeminal nucleus oral partipsiSp5ODM0.5
Rostral part of the spinal trigeminal nucleus oral partipsiSp5OR-0.5
Trigeminal ganglionipsi5Gn3
Mandibular region of the trigeminal ganglionipsi5GnMa-0.5
Trochlear nucleusipsi4-0.5
Nucleus of the solitary tractipsiSol-10
Solitary tractipsisol-0.5
Dorsal raphe nucleusipsiDR-10
Raphe magnus nucleusipsiRMg-10
Raphe pallidus nucleusipsiRPa-10
Rostral ventrolateral medullaipsiRVLM-10
Caudal interstitial nucleus of the medial longitudinal fasciculusipsiCI-10
Dorsal paragigantocellular nucleusipsiDPGi-10
Lateral paragigantocellular nucleusipsiLPGi-10

Input from

NameSideAbbr.WeightDetails
Periaqueductal grayipsiPAG1
Locus coeruleusipsiLC1
Caudal subregion of prepositus nucleusipsiCPr3
Rostral subregion of the prepositus nucleusipsiRPr2
Intermediate reticular nucleusipsiIRt-0.5
Rostroventrolateral reticular nucleusipsiRVL-0.5
Pontine reticular nucleusipsiPRN-0.5
Pontine reticular nucleus caudal partipsiPNC-0.5
Gigantocellular reticular nucleusipsiGi-0.5
Lateral reticular nucleusipsiLRt-0.5
Parvicellular reticular nucleusipsiPCRt-0.5
Subcoeruleus nucleus alpha partipsiSubCA1
Supragenual nucleusipsiSGe1
Facial nucleusipsi71
Hypoglossal nucleusipsi12S-0.5
Hypoglossal motor nucleusipsi12M1
Accessory trigeminal nucleusipsiAcs51
Intertrigeminal nucleusipsiI51
Supratrigeminal nucleusipsiSu51
Mesencephalic trigeminal nucleusipsiMe53
Trigeminal mesencephalic rootipsimes5-2
Mesencephalic trigeminal nucleus mediodorsal partipsiMe5md3
Mesencephalic trigeminal nucleus rostrocaudal extentipsiMe5rce-0.5
Motor trigeminal nucleusipsiMo52
Lateral part of the motor trigeminal nucleusipsiLMo53
Motor root of the trigeminal nerveipsim5-2
Motor trigeminal nucleus dorsolateral partipsiMo5DL3
Dorsolateral part of the dorsolateral sudivision of the motor trigeminal nucleusipsiMo5DLDL-0.5
Medial portion of the dorsolateral division of the motor trigeminal nucleusipsiMo5mDL-0.5
Dorsomedial part of the dorsolateral division of the motor trigeminal nucleusipsiMo5dmDL-0.5
Motor trigeminal nucleus ventral partipsiMo5V2
Motor trigeminal nucleus ventrolateral partipsiMo5vL-0.5
Motor trigeminal nucleus ventromedial partipsiMo5VM-0.5
Motor trigeminal nucleus masseter partipsi5Ma-0.5
Motor trigeminal nucleus medial partipsiMo5m3
Motor trigeminal nucleus jaw closing componentipsiMo5jcc-0.5
Central portions of the motor trigeminal nucleusipsiMo5ce1
Principal sensory trigeminal nucleusipsiPr51
Spinal trigeminal nucleusipsiSp5nc1
Peritrigeminal zoneipsiP5-0.5
Trigeminal ganglionipsi5Gn3
Latero-postero-ventral region of the mandibular portion of the trigeminal ganglionipsi5GnMaLPV-10
Spinal vestibular nucleusipsiSpVe3
Vestibular nucleiipsiVnc-0.5
Nucleus YipsiY1
Superior vestibular nucleusipsiSuVe2
Medial vestibular nucleus caudal partipsiMVeP3
Medial vestibular nucleus magnocellular partipsiMVeMC2
Medial vestibular nucleus parvicellular partipsiMVePC3
Medial vestibular nucleus rostral partipsiMVeR2
Lateral vestibular nucleusipsiLVe2
X cell group of the vestibular complexipsiXVES1
Nucleus of the solitary tractipsiSol1
Raphe magnus nucleusipsiRMg1
Raphe obscurus nucleusipsiROb1
Caudal interstitial nucleus of the medial longitudinal fasciculusipsiCI0.5
Caudoventral reticular nucleusipsiCVL-0.5
Inferior oliveipsiIO1
Lateral paragigantocellular nucleusipsiLPGi-0.5
Substantia innominataipsiSI-0.5
Basolateral nucleus of the amygdala magnocellular divisionipsiBLPmc0.5
Parvicellular basolateral nuclear complex of the amygdalaipsiBLpc1
Lateral amygdaloid nucleusipsiLA0.5
Bed nucleus of the stria terminalis posterolateral partipsiBSTPL-0.5
Central amygdaloid nucleus lateral divisionipsiCeL2
Central amygdaloid nucleus lateral division capsular partipsiCeC0.5
Central amygdaloid nucleus medial divisionipsiCeM3
Intercalated nucleus T1ipsiICLT1-10
Intermediolateral cell column T1ipsiIMLT1-0.5
Intercalated nucleus T2ipsiIClT2-10
Intermediolateral cell column T2ipsiIMLT2-0.5
Intercalated nucleus T3ipsiIClT3-10
Intermediolateral cell column T3ipsiIMLT3-0.5
Intercalated nucleus T4ipsiIClT4-10
Intermediolateral cell column T4ipsiIMLT4-0.5
Intercalated nucleus T5ipsiIClT5-10
Intermediolateral cell column T5ipsiIMLT5-0.5
Intercalated nucleus T6ipsiIClT6-10
Intermediolateral cell column T6ipsiIMLT6-0.5
Intercalated nucleus T7ipsiIClT7-10
Intermediolateral cell column T7ipsiIMLT7-0.5
Intercalated nucleus T8ipsiIClT8-10
Intermediolateral cell column T8ipsiIMLT8-0.5
Intercalated nucleus T9ipsiIClT9-10
Intermediolateral cell column T9ipsiIMLT9-0.5
Intercalated nucleus T10ipsiIClT10-10
Intermediolateral cell column T10ipsiIMLT10-0.5
Intercalated nucleus T11ipsiIClT11-10
Intermediolateral cell column T11ipsiIMLT11-0.5
Intercalated nucleus T12ipsiIClT12-10
Intermediolateral cell column T12ipsiIMLT12-0.5
Intercalated nucleus T13ipsiIClT13-10
Intermediolateral cell column T13ipsiIMLT13-0.5
Caudal subregion of prepositus nucleuscontraCPr3
Rostral subregion of the prepositus nucleuscontraRPr2
Rostroventrolateral reticular nucleuscontraRVL-0.5
Pontine reticular nucleuscontraPRN-0.5
Lateral reticular nucleuscontraLRt-0.5
Motor trigeminal nucleuscontraMo51
Lateral part of the motor trigeminal nucleuscontraLMo5-0.5
Peritrigeminal zonecontraP5-0.5
Spinal vestibular nucleuscontraSpVe3
Vestibular nucleicontraVnc-0.5
Nucleus YcontraY1
Superior vestibular nucleuscontraSuVe2
Medial vestibular nucleus caudal partcontraMVeP3
Medial vestibular nucleus magnocellular partcontraMVeMC2
Medial vestibular nucleus parvicellular partcontraMVePC3
Medial vestibular nucleus rostral partcontraMVeR2
Lateral vestibular nucleuscontraLVe1
X cell group of the vestibular complexcontraXVES1
Caudoventral reticular nucleuscontraCVL-0.5
Lateral paragigantocellular nucleuscontraLPGi-0.5
Parvicellular basolateral nuclear complex of the amygdalacontraBLpc1
Central amygdaloid nucleus lateral divisioncontraCeL1
Central amygdaloid nucleus medial divisioncontraCeM2
Stellate ganglionipsiAutoSteG-0.5
Superior cervical ganglionipsiAutoSCeG-0.5
Caudal half of the superior cervical ganglionipsiAutoSCeGCh-0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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