University of Rostock

Department of Anatomy

Neuroscience Group

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Rat connectome



Testis right


Abbreviation
OrgTest
Color       
Superior regionsReproductive organs male

SynonymsAbbr.Language
TestisOrgTestEng

Input from

NameSideAbbr.WeightDetails
Periaqueductal graycontraPAG-0.5
Red nucleuscontraR-0.5
A5 noradrenaline cellscontraA5-0.5
A7 noradrenaline cellscontraA7-0.5
Barringtons nucleuscontraBar-0.5
Locus coeruleuscontraLC-0.5
Parapyramidal nucleuscontraPPy-0.5
Koelliker Fuse nucleuscontraKF-0.5
Subcoeruleus nucleuscontraSubC-0.5
Area postremacontraAP-0.5
Nucleus of the solitary tractcontraSol-0.5
Raphe magnus nucleuscontraRMg-0.5
Raphe obscurus nucleuscontraROb-0.5
Raphe pallidus nucleuscontraRPa-0.5
A1 noradrenalin cells C1 adrenaline cellscontraA1/C1-0.5
Paragigantocellular reticular nucleuscontraPGi-0.5
Preoptic regioncontraPREO-0.5
Lateral hypothalamic areacontraLH-0.5
Lateral hypothalamic area perifornical partcontraPFx-0.5
Dorsal hypothalamic areacontraDA-0.5
Periventricular zonecontraPVZ-0.5
Arcuate nucleuscontraArc-0.5
Paraventricular hypothalamic nucleuscontraPa-0.5
Suprachiasmatic nucleuscontraSCh-0.5
Zona incertacontraZI-0.5
Bed nucleus of the stria terminaliscontraBST-0.5
Central amygdaloid nucleuscontraCe-0.5
Frontal association cortexcontraFrA-0.5
Insular cortexcontraICX-0.5
Periaqueductal grayipsiPAG3
Red nucleusipsiR1
Substantia nigra A9ipsiSN-0.5
Ventral tegmental area A10ipsiVTA-0.5
A4 noradrenaline cellsipsiA4-0.5
A5 noradrenaline cellsipsiA53
A7 noradrenaline cellsipsiA72
Barringtons nucleusipsiBar1
Locus coeruleusipsiLC3
Parapyramidal nucleusipsiPPy1
Koelliker Fuse nucleusipsiKF1
Subcoeruleus nucleusipsiSubC2
Medulla oblongataipsiMeOb-10
C2 adrenaline cellsipsiC2-0.5
C3 adrenaline cellsipsiC3-0.5
Area postremaipsiAP2
Nucleus of the solitary tractipsiSol2
Dorsal motor nucleus of vagusipsi10-0.5
Raphe nucleiipsiRAN-0.5
Raphe magnus nucleusipsiRMg3
Raphe obscurus nucleusipsiROb2
Raphe pallidus nucleusipsiRPa2
A1 noradrenalin cells C1 adrenaline cellsipsiA1/C11
A1 noradrenergic cellsipsiA1-0.5
Paragigantocellular reticular nucleusipsiPGi2
Preoptic regionipsiPREO1
Dorsal regionipsiDHR-0.5
Lateral hypothalamic areaipsiLH3
Lateral hypothalamic area perifornical partipsiPFx2
Dorsal hypothalamic areaipsiDA1
Periventricular zoneipsiPVZ1
Arcuate nucleusipsiArc1
Paraventricular hypothalamic nucleusipsiPa3
Suprachiasmatic nucleusipsiSCh3
A11 dopamine cellsipsiA11-0.5
A8 dopamine cells retrorubral groupipsiRRF-0.5
Zona incertaipsiZI1
Amygdaloid complexipsiAC-0.5
Bed nucleus of the stria terminalisipsiBST2
Central amygdaloid nucleusipsiCe3
Frontal association cortexipsiFrA1
Insular cortexipsiICX3
Parasympathetic preganglionic column of the lumbosacral cordipsiParaSymPre-0.5
Dorsal horn of spinal cordipsiDHMES-0.5
Lamina 2 of dorsal horn of spinal cordipsisDHMESL2-0.5
Lamina 4 of dorsal horn of spinal cordipsiDHMESL4-0.5
Spinal cord lamina 10ipsiMESL10-10
Intermediolateral cell column T1ipsiIMLT1-0.5
Area X T1ipsiSCL10T1-0.5
Spinal cord layer 4 T1ipsiSCL4T11
Spinal cord layer 1 T1ipsiSCL1T11
Spinal cord layer 7 T1ipsiSCL7T11
Intermediolateral cell column T2ipsiIMLT2-0.5
Area X T2ipsiSCL10T2-0.5
Spinal cord layer 4 T2ipsiSCL4T21
Spinal cord layer 1 T2ipsiSCL1T21
Spinal cord layer 7 T2ipsiSCL7T21
Intermediolateral cell column T3ipsiIMLT3-0.5
Area X T3ipsiSCL10T3-0.5
Spinal cord layer 4 T3ipsiSCL4T31
Spinal cord layer 1 T3ipsiSCL1T31
Spinal cord layer 7 T3ipsiSCL7T31
Intermediolateral cell column T4ipsiIMLT4-0.5
Area X T4ipsiSCL10T4-0.5
Spinal cord layer 4 T4ipsiSCL4T41
Spinal cord layer 1 T4ipsiSCL1T41
Spinal cord layer 7 T4ipsiSCL7T41
Intermediolateral cell column T5ipsiIMLT5-0.5
Area X T5ipsiSCL10T5-0.5
Intermediolateral cell column T6ipsiIMLT6-0.5
Area X T6ipsiSCL10T6-0.5
Intermediolateral cell column T7ipsiIMLT7-0.5
Area X T7ipsiSCL10T7-0.5
Intermediolateral cell column T8ipsiIMLT8-0.5
Area X T8ipsiSCL10T8-0.5
Intermediolateral cell column T9ipsiIMLT9-0.5
Area X T9ipsiSCL10T9-0.5
Intermediolateral cell column T10ipsiIMLT10-0.5
Area X T10ipsiSCL10T10-0.5
Spinal cord layer 4 T10ipsiSCL4T101
Spinal cord layer 1 T10ipsiSCL1T101
Spinal cord layer 7 T10ipsiSCL7T101
Intermediolateral cell column T11ipsiIMLT11-0.5
Area X T11ipsiSCL10T11-0.5
Spinal cord layer 4 T11ipsiSCL4T111
Spinal cord layer 1 T11ipsiSCL1T111
Spinal cord layer 7 T11ipsiSCL7T111
Intermediolateral cell column T12ipsiIMLT12-0.5
Area X T12ipsiSCL10T12-0.5
Dorsal horn T12ipsiDHT12-0.5
Spinal cord layer 4 T12ipsiSCL4T121
Spinal cord layer 1 T12ipsiSCL1T121
Spinal cord layer 7 T12ipsiSCL7T121
Intermediolateral cell column T13ipsiIMLT13-0.5
Area X T13ipsiSCL10T13-0.5
Dorsal horn T13ipsiDHT13-0.5
Spinal cord layer 4 T13ipsiSCL4T131
Spinal cord layer 1 T13ipsiSCL1T131
Spinal cord layer 7 T13ipsiSCL7T131
Thoracic intermediolateral cell columnipsiTSegiL-10
Intermediolateral cell column L1ipsiIMLL1-0.5
Lumbar parasympathetic nucleus L1ipsiLPSyL1-0.5
Lumbar parasympathetic nucleus L2ipsiLPSyL2-0.5
Lumbar parasympathetic nucleus L3ipsiLPSyL3-0.5
Lumbar parasympathetic nucleus L4ipsiLPSyL4-0.5
Lumbar parasympathetic nucleus L5ipsiLPSyL5-0.5
Dorsal horn L5ipsiDHL5-0.5
Lumbar parasympathetic nucleus L6ipsiLPSyL6-0.5
Sacral parasympathetic nucleus S1ipsiSPSyS1-0.5
Sacral parasympathetic nucleus S2ipsiSPSyS2-0.5
Sacral parasympathetic nucleus S3ipsiSPSyS3-0.5
Sacral parasympathetic nucleus S4ipsiSPSyS4-0.5
Lumbosacral spinal cord layer 10ipsiLSSCL10-10
Accessory pelvic gangliacontraAutoAcPe1
Paravertebral sympathetic gangliaipsiAutoPaGTSym2.5
Accessory pelvic gangliaipsiAutoAcPe3
Pelvic ganglionipsiAutoPeG3
Inter-renal ganglionipsiAutoParGIR3
Inferior mesenteric ganglionipsiAutoimg0.5
Superior spermatic nerveipsissperm-0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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