University of Rostock

Department of Anatomy

Neuroscience Group

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Rat connectome



Subincertal nucleus left


Abbreviation
SubI
Color       
Superior regionsDiencephalon

SynonymsAbbr.Language
Subincertal nucleusSubIEng

Output to

NameSideAbbr.WeightDetails
Dorsal periaqueductal grayipsiDPAG-0.5
Lateral caudal part of the ventrolateral periaqueductal grayipsiLCVLPAG-0.5
Dorsal raphe nucleusipsiDR2
Dorsal raphe nucleus caudal partipsiDRC2
Dorsal raphe nucleus central partipsiDRcep2
Dorsal raphe nucleus lateral wingipsiDRlw3
Dorsal raphe nucleus rostral partipsiDRr2
Central raphe nucleus dorsal partipsiCRNdp0.5
Central raphe nucleus ventral partipsiCRNvp0.5
Paraventricular hypothalamic nucleusipsiPa0.5
Dorsal hippocampus dentate gyrusipsiDDG-0.5
Frontoparietal cortex layersipsiFPC3
Primary visual cortexipsiV13
Submandibular glandipsiOrgsSubg-10
Submandibular glandcontraOrgsSubg-10

Input from

NameSideAbbr.WeightDetails
Interstitial nucleus of medial longitudinal fasciculusipsiIMLF1
Rostral interstitial nucleus of medial longitudinal fasciculusipsiRI1
Periaqueductal grayipsiPAG1
Ventral tegmental area A10ipsiVTA1
Pedunculopontine tegmental nucleusipsiPPTg1
Deep mesencephalic nucleusipsiDpMe1
Pontine reticular nucleus oral partipsiPnO1
Subnucleus reticularis dorsalisipsiSRD2
Lateral hypothalamic areaipsiLH4
Lateral hypothalamic area perifornical partipsiPFx4
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM4
Dorsomedial hypothalamic nucleus dorsomedial partipsiDMDM4
Anterior pretectal nucleus caudal partipsiAPTca1.5
Anterior pretectal nucleus rostral partipsiAPTro1.5
Field CA1 of hippocampus dorsalipsiCA1d1
Dorsal subiculum lateral partipsiSdLa1
Midmediolateral caudal part of the ventral subiculumipsiSvcMM1
Infralimbic cortexipsiIL1
Magnocellular nucleus of the posterior commissureipsiMCPC1
Nucleus of the posterior commissureipsiPCom1
Precommissural nucleusipsiPrC1
Lateral spinal nucleus C1ipsiLSpC1-1
Lateral spinal nucleus C2ipsiLSpC2-1
Lateral spinal nucleus C3ipsiLSpC3-1
Lateral spinal nucleus C4ipsiLSpC4-1
Lateral spinal nucleus C5ipsiLSpC5-1
Lateral spinal nucleus C6ipsiLSpC6-1
Lateral spinal nucleus C7ipsiLSpC7-1
Lateral spinal nucleus C8ipsiLSpC8-1
Lateral spinal nucleus T1ipsiLSpT1-1
Lateral spinal nucleus T2ipsiLSpT2-1
Lateral spinal nucleus T3ipsiLSpT3-1
Lateral spinal nucleus T4ipsiLSpT4-1
Lateral spinal nucleus T5ipsiLSpT5-1
Lateral spinal nucleus T6ipsiLSpT6-1
Lateral spinal nucleus T7ipsiLSpT7-1
Lateral spinal nucleus T8ipsiLSpT8-1
Lateral spinal nucleus T9ipsiLSpT9-1
Lateral spinal nucleus T10ipsiLSpT10-1
Lateral spinal nucleus T11ipsiLSpT11-1
Lateral spinal nucleus T12ipsiLSpT12-1
Lateral spinal nucleus T13ipsiLSpT13-1
Lateral spinal nucleus L1ipsiLSpL1-1
Lateral spinal nucleus L2ipsiLSpL2-1
Lateral spinal nucleus L3ipsiLSpL3-1
Lateral spinal nucleus L4ipsiLSpL4-1
Lateral spinal nucleus L5ipsiLSpL5-1
Lateral spinal nucleus L6ipsiLSpL6-1
Lateral spinal nucleus S1ipsiLSpS1-1
Lateral spinal nucleus S2ipsiLSpS2-1
Lateral spinal nucleus S3ipsiLSpS3-1
Lateral spinal nucleus S4ipsiLSpS4-1
Interstitial nucleus of medial longitudinal fasciculuscontraIMLF0.5
Rostral interstitial nucleus of medial longitudinal fasciculuscontraRI0.5
Periaqueductal graycontraPAG0.5
Deep mesencephalic nucleuscontraDpMe0.5
Cuneate nucleuscontraCu2
Anterior pretectal nucleus caudal partcontraAPTca0.5
Anterior pretectal nucleus rostral partcontraAPTro0.5
Magnocellular nucleus of the posterior commissurecontraMCPC0.5
Nucleus of the posterior commissurecontraPCom0.5
Precommissural nucleuscontraPrC1.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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