University of Rostock

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Rat connectome



Submandibular gland left


Abbreviation
OrgsSubg
Color       
Superior regionsExocrine glands

SynonymsAbbr.Language
Submandibular glandOrgsSubgEng
Submandibular salivary gland Eng

Output to

NameSideAbbr.WeightDetails
Glossopharyngo-vagal complex gangliaipsiGPVG0
Trigeminal ganglionipsi5Gn3
Dorsal root ganglion C2ipsiDRGC21
Dorsal root ganglion C3ipsiDRGC31
Dorsal root ganglion C4ipsiDRGC41
Dorsal root ganglion C5ipsiDRGC51
Dorsal root ganglion T2ipsiDRGT21
Glossopharyngo-vagal complex gangliacontraGPVG0
Geniculate ganglionipsiAutoGG0
Jugular ganglionipsiAutoJG0
Nodose ganglionipsiAutoNoG0
Geniculate ganglioncontraAutoGG0
Jugular ganglioncontraAutoJG0
Nodose ganglioncontraAutoNoG0

Input from

NameSideAbbr.WeightDetails
Central grayipsiCG-10
Periventricular gray matteripsiPVG-10
Prerubral fieldipsiPR-10
Peduncularpontine nucleusipsiPPN-10
Laterodorsal tegmental nucleusipsiLDTg-10
Edinger Westphal nucleusipsiEW-10
Lateral cerebellar nucleusipsiCERL-10
Medial cerebellar nucleusipsiMed-10
A5 noradrenaline cellsipsiA5-10
Locus coeruleusipsiLC-10
Intermediate reticular nucleusipsiIRt-10
Paramedian reticular nucleusipsiPMn-10
Deep mesencephalic nucleusipsiDpMe-10
Pontine reticular nucleus oral partipsiPnO-10
Pontine reticular nucleus ventral partipsiPnV-10
Pontine reticular nucleus caudal partipsiPNC-10
Lateral parabrachial nucleusipsiLPB-10
Parabrachial nucleus medialipsiPBnMe-10
Gigantocellular reticular nucleusipsiGi-10
Gigantocellular reticular nucleus alpha partipsiGiA-10
Gigantocellular reticular nucleus ventral partipsiGiV-10
Lateral reticular nucleusipsiLRt-0.5
Medullary reticular nucleus dorsal partipsiMdDd-10
Ventral medullary reticular formationipsiVMurF-10
Parvicellular reticular nucleusipsiPCRt-10
Parvicellular reticular nucleus alpha partipsiPCRtA-10
Subcoeruleus nucleusipsiSubC-10
Facial nucleus dorsolateral subnucleusipsi7DL-0.5
Intertrigeminal nucleusipsiI5-10
Motor trigeminal nucleus caudal partipsiMo5C-0.5
Principal sensory trigeminal nucleusipsiPr5-10
Spinal trigeminal nucleus caudal partipsiSp5C-10
Spinal trigeminal nucleus oral partipsiSp5O-10
Nucleus of the solitary tract medial partipsiSolM-10
Dorsal raphe nucleusipsiDR-10
Raphe magnus nucleusipsiRMg-10
Raphe obscurus nucleusipsiROb-10
Raphe pallidus nucleusipsiRPa-10
Rostral ventrolateral medullaipsiRVLM-0.5
Dorsolateral region of the rostral medullaipsiMeObRdL-0.5
Nucleus of RolleripsiRo-10
Lateral paragigantocellular nucleusipsiLPGi-10
Superior salivatory nucleusipsiSuS-0.5
Lamina terminalisipsiLTer-0.5
Substantia innominataipsiSI-0.5
Lateral preoptic areaipsiLPO-0.5
Medial preoptic areaipsiMPA-0.5
Medial preoptic area rostral partipsiMPAR-0.5
Median preoptic nucleusipsiMnPO-0.5
Vascular organ of the lamina terminalisipsiVOLT-0.5
Lateral hypothalamic areaipsiLH-0.5
Anteroventral preoptic nucleusipsiAnV-0.5
Arcuate nucleusipsiArc-0.5
Area around the arcuate nucleusipsiArcaa-0.5
Paraventricular hypothalamic nucleus parvicellular division dorsal partipsiPaPcD-0.5
Paraventricular hypothalamic nucleusipsiPa-0.5
Paraventricular nucleus lateral parvocellular partipsiPaLp-0.5
Paraventricular nucleus medial parvocellular partipsiPaMep-0.5
A8 dopamine cells retrorubral groupipsiRRF-10
Perifornical nucleusipsiPeF-10
Retrochiasmatic areaipsiRCh-0.5
Subincertal nucleusipsiSubI-10
Subfornical organipsiSFO-0.5
Zona incertaipsiZI-0.5
Bed nucleus of the stria terminalisipsiBST-0.5
Central amygdaloid nucleusipsiCe-0.5
Insular cortexipsiICX-0.5
Insular cortex layer 2ipsiICXL2-0.5
Insular cortex layer 5ipsiICXL5-0.5
Lateral agranular prefrontal cortexipsiAGl1
Medial agranular prefrontal cortexipsiAGm1
Primary somatosensory cortex layer 5ipsiS1L51
Secondary somatosensory cortex layer 5ipsiS2L51
Precommissural nucleusipsiPrC-10
Intermediolateral cell column T1ipsiIMLT1-0.5
Spinal cord layer 1 T1ipsiSCL1T10.5
Intermediolateral cell column T2ipsiIMLT2-0.5
Spinal cord layer 1 T2ipsiSCL1T20.5
Intermediolateral cell column T3ipsiIMLT3-0.5
Intermediolateral cell column T4ipsiIMLT4-0.5
Intermediolateral cell column T5ipsiIMLT5-0.5
Spinal cord layer 1 T5ipsiSCL1T50.5
Intermediolateral cell column T6ipsiIMLT6-0.5
Spinal cord layer 1 T7ipsiSCL1T70.5
Spinal cord layer 1 T10ipsiSCL1T100.5
Central graycontraCG-10
Periventricular gray mattercontraPVG-10
Peduncularpontine nucleuscontraPPN-10
Laterodorsal tegmental nucleuscontraLDTg-10
Lateral cerebellar nucleuscontraCERL-10
Medial cerebellar nucleuscontraMed-10
A5 noradrenaline cellscontraA5-10
Locus coeruleuscontraLC-10
Intermediate reticular nucleuscontraIRt-10
Paramedian reticular nucleuscontraPMn-10
Deep mesencephalic nucleuscontraDpMe-10
Pontine reticular nucleus oral partcontraPnO-10
Pontine reticular nucleus ventral partcontraPnV-10
Pontine reticular nucleus caudal partcontraPNC-10
Lateral parabrachial nucleuscontraLPB-10
Parabrachial nucleus medialcontraPBnMe-10
Gigantocellular reticular nucleuscontraGi-10
Gigantocellular reticular nucleus alpha partcontraGiA-10
Gigantocellular reticular nucleus ventral partcontraGiV-10
Lateral reticular nucleuscontraLRt-0.5
Medullary reticular nucleus dorsal partcontraMdDd-10
Ventral medullary reticular formationcontraVMurF-10
Parvicellular reticular nucleuscontraPCRt-10
Parvicellular reticular nucleus alpha partcontraPCRtA-10
Subcoeruleus nucleuscontraSubC-10
Facial nucleus dorsolateral subnucleuscontra7DL-0.5
Motor trigeminal nucleus caudal partcontraMo5C-0.5
Principal sensory trigeminal nucleuscontraPr5-10
Spinal trigeminal nucleus oral partcontraSp5O-10
Nucleus of the solitary tract medial partcontraSolM-10
Dorsal raphe nucleuscontraDR-10
Raphe pallidus nucleuscontraRPa-10
Lateral area of the rostral medullacontraMeObRL1
Nucleus of RollercontraRo-10
Lateral paragigantocellular nucleuscontraLPGi-10
Superior salivatory nucleuscontraSuS-10
Lamina terminaliscontraLTer-0.5
Substantia innominatacontraSI1
Lateral preoptic areacontraLPO2
Medial preoptic areacontraMPA2
Medial preoptic area rostral partcontraMPAR-0.5
Median preoptic nucleuscontraMnPO-0.5
Vascular organ of the lamina terminaliscontraVOLT-0.5
Lateral hypothalamic areacontraLH2
Anteroventral preoptic nucleuscontraAnV-0.5
Arcuate nucleuscontraArc2
Area around the arcuate nucleuscontraArcaa2
Paraventricular hypothalamic nucleuscontraPa2
Perifornical nucleuscontraPeF-10
Retrochiasmatic areacontraRCh1
Subincertal nucleuscontraSubI-10
Subfornical organcontraSFO-0.5
Zona incertacontraZI1
Bed nucleus of the stria terminaliscontraBST2
Central amygdaloid nucleus medial divisioncontraCeM1
Insular cortexcontraICX2
Insular cortex layer 2contraICXL2-0.5
Insular cortex layer 5contraICXL5-0.5
Lateral agranular prefrontal cortexcontraAGl1
Medial agranular prefrontal cortexcontraAGm1
Primary somatosensory cortex layer 5contraS1L51
Secondary somatosensory cortex layer 5contraS2L51
Precommissural nucleuscontraPrC-10
Intermediolateral cell column T1contraIMLT1-0.5
Intermediolateral cell column T2contraIMLT2-0.5
Intermediolateral cell column T3contraIMLT3-0.5
Intermediolateral cell column T4contraIMLT4-0.5
Intermediolateral cell column T5contraIMLT5-0.5
Intermediolateral cell column T6contraIMLT6-0.5
Stellate ganglionipsiAutoSteG-0.5
Superior cervical ganglionipsiAutoSCeG4
Caudal part of the superior cervical ganglionipsiAutoSCeGC-0.5
Caudal two-thirds of the superior cervical ganglionipsiAutoSCeGCtt3
Caudal half of the superior cervical ganglionipsiAutoSCeGCh-0.5
Thoracic sympathetic gangliaipsiAutoTSG0
Submandibular ganglionipsiAutoGsm-0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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