University of Rostock

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Rat connectome



Lateral spinal nucleus C1 left


Abbreviation
LSpC1
Color       
Superior regionsCervical segment 1

SynonymsAbbr.Language
Lateral spinal nucleus C1LSpC1Eng
Nucleus cervicalis lateralis Lat
Nucleus in the dorsolateral funiculus  
Lateral cervical nucleus  
Lateral spinal nucleusLSP 
Lateral spinal nucleusLSN 

Output to

NameSideAbbr.WeightDetails
Central grayipsiCG1
Periaqueductal grayipsiPAG2
Ventrolateral periaqueductal grayipsiVLPAG1.5
Prerubral fieldipsiPR-3
Inferior colliculusipsiICOL2
Superior colliculusipsiSC2
Mesencephalic reticular formationipsiMRF1
Cuneiforme nucleusipsiCnF1.5
Parabrachial nucleusipsiPB1.5
Koelliker Fuse nucleusipsiKF-0.5
Lateral parabrachial nucleus external partipsiLPBE1.5
Lateral reticular nucleusipsiLRt-0.5
Lateral reticular nucleus lateral partipsiLRtL1
Lateral reticular nucleus magnocellular partipsiLRtMC1
Lateral reticular nucleus parvicellular partipsiLRtPC1
Principal sensory trigeminal nucleus dorsolateral partipsiPr5DL-0.5
Nucleus of the solitary tractipsiSol1
Nucleus of the solitary tract caudal partipsiSolca-0.5
Nucleus of the solitary tract lateral partipsiSolL1
Nucleus of the solitary tract medial partipsiSolM1
Nucleus of the vertical limb of the diagonal bandipsiVDB-0.5
Medial septal nucleusipsiMS-0.5
HypothalamusipsiHYPO-0.5
Dorsal regionipsiDHR-0.5
Preoptic anterior regionipsiPAreg3
Lateral hypothalamic areaipsiLH3
Medial division of the hypothalamusipsiMdH3
Dorsal hypothalamic areaipsiDA1.5
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM1.5
Posterior hypothalamic areaipsiPHA-0.5
Paraventricular hypothalamic nucleusipsiPa1.5
Suprachiasmatic nucleusipsiSCh1.5
Supraoptic nucleus [Supraoptic region]ipsiSO1.5
Subincertal nucleusipsiSubI-1
Dorsal thalamusipsiDOR1
Anteromedial thalamic nucleusipsiAM-3
Centrolateral thalamic nucleusipsiCL1
Paracentral thalamic nucleusipsiPC-3
Rhomboid thalamic nucleusipsiRh-3
Posterior thalamic nuclear groupipsiPo1
Posterior thalamic nuclear group caudal partipsiPoca2
Submedius thalamic nucleusipsiSub2
Reuniens thalamic nucleusipsiRe-3
Reuniens thalamic nucleus ventral partipsiReV-3
Ventrolateral thalamic nucleusipsiVL-3
Ventrobasal complexipsiVB2
Ventral posterolateral thalamic nucleus caudal partipsiVPLca2
Ventral posteromedial thalamic nucleusipsiVPM2
Ventromedial thalamic nucleusipsiVM-3
Posterior groupipsiPTG-3
Ventral medial nucleus of the thalamusipsiVMT-3
Zona incertaipsiZI-0.5
Amygdaloid complexipsiAC-0.5
Bed nucleus of the stria terminalisipsiBST1
Central amygdaloid nucleusipsiCe1
Central amygdaloid nucleus anterior partipsiCeAn3
Globus pallidusipsiGP-0.5
Ventral pallidumipsiVP-0.5
Accumbens nucleusipsiAc-0.5
Infralimbic cortexipsiIL-0.5
Orbital cortexipsiOrC0.5
Medial orbital cortexipsiMO-0.5
Septal regionipsiSER-0.5
Lateral septal nucleusipsiLS-0.5
Ventrolateral funiculusipsivLF-2
Cervical segment 1ipsiCS1-0.5
Cervical segment 2ipsiCS2-0.5
Cervical segment 3ipsiCS3-0.5
Cervical segment 4ipsiCS4-0.5
Cervical segment 5ipsiCS5-0.5
Cervical segment 6ipsiCS6-0.5
Cervical segment 7ipsiCS7-0.5
Cervical segment 8ipsiCS8-0.5
Thoracal segment 1ipsiT1-0.5
Thoracal segment 2ipsiT2-0.5
Thoracal segment 3ipsiT3-0.5
Thoracal segment 4ipsiT4-0.5
Thoracal segment 5ipsiT5-0.5
Thoracal segment 6ipsiT6-0.5
Thoracal segment 7ipsiT7-0.5
Thoracal segment 8ipsiT8-0.5
Thoracal segment 9ipsiT9-0.5
Thoracal segment 10ipsiT10-0.5
Thoracal segment 11ipsiT11-0.5
Thoracal segment 12ipsiT12-0.5
Thoracal segment 13ipsiT13-0.5
Lumbar segment 1ipsiL1-0.5
Lumbar segment 2ipsiL2-0.5
Lumbar segment 3ipsiL3-0.5
Lumbar segment 4ipsiL4-0.5
Area X L4ipsiSCL10L4-0.5
Spinal cord layer 8 L4ipsiSCL8L4-0.5
Lumbar segment 5ipsiL5-0.5
Dorsal horn L5ipsiDHL51
Lumbar segment 6ipsiL6-0.5
Dorsal horn L6ipsiDHL61
Sacral segment 1ipsiSa1-0.5
Dorsal horn S1ipsiDHS11
Sacral segment 2ipsiSa2-0.5
Sacral segment 3ipsiSa3-0.5
Sacral segment 4ipsiSa4-0.5
Nucleus of DarkschewitschcontraDk-0.5
Oculomotor nucleuscontra3-0.5
Periaqueductal graycontraPAG-0.5
Ventrolateral periaqueductal graycontraVLPAG2
Red nucleuscontraR-0.5
Inferior colliculuscontraICOL3
Intercollicular nucleuscontraInCo-0.5
Superior colliculuscontraSC3
Edinger Westphal nucleuscontraEW-0.5
Interstitial nucleus of CajalcontraInC-0.5
Mesencephalic reticular formationcontraMRF3
Cuneiforme nucleuscontraCnF2
Parabrachial nucleuscontraPB3
Koelliker Fuse nucleuscontraKF-0.5
Gigantocellular reticular nucleus lateral partcontraGirL1
Lateral reticular nucleus lateral partcontraLRtL2
Principal sensory trigeminal nucleus dorsolateral partcontraPr5DL-0.5
Nucleus of the solitary tractcontraSol-0.5
Nucleus of the solitary tract lateral partcontraSolL1
Nucleus of the solitary tract medial partcontraSolM1
Cuneate nucleuscontraCu-0.5
Nucleus of the vertical limb of the diagonal bandcontraVDB-0.5
Medial septal nucleuscontraMS-0.5
Preoptic anterior regioncontraPAreg3
Lateral hypothalamic areacontraLH3
Medial division of the hypothalamuscontraMdH2
Dorsal hypothalamic areacontraDA3
Dorsomedial hypothalamic nucleus [Medial zone]contraDM3
Paraventricular hypothalamic nucleuscontraPa3
Suprachiasmatic nucleuscontraSCh3
Supraoptic nucleus [Supraoptic region]contraSO3
Dorsal thalamuscontraDOR2
Centrolateral thalamic nucleuscontraCL2
Posterior thalamic nuclear groupcontraPo2
Posterior thalamic nuclear group ventromedial partcontraPovm-0.5
Submedius thalamic nucleuscontraSub0.5
Ventrobasal complexcontraVB3
Ventral posterolateral thalamic nucleuscontraVPL-0.5
Pretectal regioncontraPRT-0.5
Anterior pretectal nucleuscontraAPT-0.5
Posterior pretectal nucleuscontraPPT-0.5
Lateral funiculuscontralf-2
Amygdaloid complexcontraAC-0.5
Central amygdaloid nucleuscontraCe1
Globus palliduscontraGP-0.5
Ventral pallidumcontraVP-0.5
Accumbens nucleuscontraAc-0.5
Infralimbic cortexcontraIL-0.5
Orbital cortexcontraOrC0.5
Medial orbital cortexcontraMO-0.5
Septal regioncontraSER-0.5
Lateral septal nucleuscontraLS-0.5
Cervical segment 1contraCS1-0.5
Cervical segment 2contraCS2-0.5
Cervical segment 3contraCS3-0.5
Cervical segment 4contraCS4-0.5
Cervical segment 5contraCS5-0.5
Cervical segment 6contraCS6-0.5
Cervical segment 7contraCS7-0.5
Cervical segment 8contraCS8-0.5
Thoracal segment 1contraT1-0.5
Thoracal segment 2contraT2-0.5
Thoracal segment 3contraT3-0.5
Thoracal segment 4contraT4-0.5
Thoracal segment 5contraT5-0.5
Thoracal segment 6contraT6-0.5
Thoracal segment 7contraT7-0.5
Thoracal segment 8contraT8-0.5
Thoracal segment 9contraT9-0.5
Thoracal segment 10contraT10-0.5
Thoracal segment 11contraT11-0.5
Thoracal segment 12contraT12-0.5
Thoracal segment 13contraT13-0.5
Lumbar segment 1contraL1-0.5
Lumbar segment 2contraL2-0.5
Lumbar segment 3contraL3-0.5
Lumbar segment 4contraL4-0.5
Area X L4contraSCL10L4-0.5
Spinal cord layer 8 L4contraSCL8L4-0.5
Lumbar segment 5contraL5-0.5
Dorsal horn L5contraDHL51
Lumbar segment 6contraL6-0.5
Dorsal horn L6contraDHL61
Sacral segment 1contraSa1-0.5
Dorsal horn S1contraDHS11
Sacral segment 2contraSa2-0.5
Sacral segment 3contraSa3-0.5
Sacral segment 4contraSa4-0.5
Stellate ganglionipsiAutoSteG-0.5
Superior cervical ganglionipsiAutoSCeG-0.5
Celiac ganglionipsiAutoCel-0.5
Suprarenal ganglionipsiAutoSupra-0.5
Pancreas sideipsiOrgsPancs-0.5

Input from

NameSideAbbr.WeightDetails
Lateral hypothalamic areaipsiLH1
Spinal cord lamina 3ipsiMESL3-0.5
Spinal cord lamina 4ipsiMESL4-0.5
Spinal cord lamina 5ipsiMESL5-0.5
Spinal cord lamina 1ipsiMESL1-0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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