University of Rostock

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Rat connectome



Lateral spinal nucleus C7 left


Abbreviation
LSpC7
Color       
Superior regionsCervical segment 7

SynonymsAbbr.Language
Lateral spinal nucleus C7LSpC7Eng

Output to

NameSideAbbr.WeightDetails
Central grayipsiCG1
Periaqueductal grayipsiPAG2
Dorsal periaqueductal grayipsiDPAG0.5
Lateral periaqueductal grayipsiLPAG0.5
Ventrolateral periaqueductal grayipsiVLPAG1.5
Prerubral fieldipsiPR-3
Inferior colliculusipsiICOL2
Superior colliculusipsiSC2
Mesencephalic reticular formationipsiMRF1
Cuneiforme nucleusipsiCnF1.5
Parabrachial nucleusipsiPB1.5
Lateral parabrachial nucleus external partipsiLPBE1.5
Lateral reticular nucleusipsiLRt-0.5
Lateral reticular nucleus lateral partipsiLRtL1
Lateral reticular nucleus magnocellular partipsiLRtMC1
Lateral reticular nucleus parvicellular partipsiLRtPC1
Principal sensory trigeminal nucleus dorsolateral partipsiPr5DL-0.5
Nucleus of the solitary tractipsiSol1
Nucleus of the solitary tract caudal partipsiSolca-0.5
Nucleus of the solitary tract lateral partipsiSolL1
Nucleus of the solitary tract medial partipsiSolM1
Cuneate nucleusipsiCu1
Rostral part of the ventromedial medulla oblongataipsiRMeObvm1
Nucleus of the vertical limb of the diagonal bandipsiVDB-0.5
Medial septal nucleusipsiMS-0.5
Substantia innominata dorsal partipsiSID1
HypothalamusipsiHYPO-0.5
Dorsal regionipsiDHR-0.5
Preoptic anterior regionipsiPAreg3
Lateral hypothalamic areaipsiLH3
Lateral hypothalamic area anterior partipsiLHAa0.5
Lateral hypothalamic area posterior partipsiLHAp0.5
Medial division of the hypothalamusipsiMdH3
Dorsal hypothalamic areaipsiDA1.5
Dorsomedial hypothalamic nucleus [Medial zone]ipsiDM1.5
Posterior hypothalamic areaipsiPHA0.5
Paraventricular hypothalamic nucleusipsiPa1.5
Suprachiasmatic nucleusipsiSCh1.5
Supraoptic decussationipsisox-2
Supraoptic nucleus [Supraoptic region]ipsiSO1.5
Subincertal nucleusipsiSubI-1
Dorsal thalamusipsiDOR1
Anteromedial thalamic nucleusipsiAM-3
Central medial thalamic nucleusipsiCM0.5
Centrolateral thalamic nucleusipsiCL1
Paracentral thalamic nucleusipsiPC-3
Parafascicular thalamic nucleusipsiPF0.5
Rhomboid thalamic nucleusipsiRh-3
Posterior thalamic nuclear groupipsiPo1
Posterior thalamic nuclear group caudal partipsiPoca2
Posterior thalamic nuclear group triangular partipsiPoT2
Mediodorsal thalamic nucleusipsiMD1.5
Submedius thalamic nucleusipsiSub2
Paraventricular thalamic nucleus caudal partipsiPVca0.5
Paraventricular thalamic nucleus ventral partipsiPVV0.5
Reuniens thalamic nucleusipsiRe0.5
Reuniens thalamic nucleus ventral partipsiReV-3
Ventrolateral thalamic nucleusipsiVL-3
Ventral posterior thalamic nucleus parvicellular partipsiVPPC0.5
Ventrobasal complexipsiVB2
Ventral posterolateral thalamic nucleus caudal partipsiVPLca2
Ventral posteromedial thalamic nucleusipsiVPM2
Ventromedial thalamic nucleusipsiVM0.5
Posterior groupipsiPTG-3
Subparafascicular thalamic nucleusipsiSPF0.5
Ventral medial nucleus of the thalamusipsiVMT-3
Zona incertaipsiZI0.5
Caudalmost portion of the optic chiasmipsioxcm-2
Amygdaloid complexipsiAC-0.5
Basolateral amygdaloid nucleusipsiBL0
Bed nucleus of the stria terminalisipsiBST1
Central amygdaloid nucleusipsiCe0.5
Central amygdaloid nucleus anterior partipsiCeAn3
Globus pallidusipsiGP0.5
Ventral pallidumipsiVP-0.5
Accumbens nucleusipsiAc1
Medial accumbensipsiAcbM-0.5
Infralimbic cortexipsiIL-0.5
Orbital cortexipsiOrC0.5
Medial orbital cortexipsiMO-0.5
Septal regionipsiSER-0.5
Lateral septal nucleusipsiLS-0.5
Ventrolateral funiculusipsivLF-2
Cervical segment 1ipsiCS1-0.5
Cervical segment 2ipsiCS2-0.5
Cervical segment 3ipsiCS3-0.5
Cervical segment 4ipsiCS4-0.5
Cervical segment 5ipsiCS5-0.5
Cervical segment 6ipsiCS6-0.5
Cervical segment 7ipsiCS7-0.5
Cervical segment 8ipsiCS8-0.5
Thoracal segment 1ipsiT1-0.5
Thoracal segment 2ipsiT2-0.5
Thoracal segment 3ipsiT3-0.5
Thoracal segment 4ipsiT4-0.5
Thoracal segment 5ipsiT5-0.5
Thoracal segment 6ipsiT6-0.5
Thoracal segment 7ipsiT7-0.5
Thoracal segment 8ipsiT8-0.5
Thoracal segment 9ipsiT9-0.5
Thoracal segment 10ipsiT10-0.5
Thoracal segment 11ipsiT11-0.5
Thoracal segment 12ipsiT12-0.5
Thoracal segment 13ipsiT13-0.5
Lumbar segmentsipsiLSeg1.5
Lumbar segment 1ipsiL1-0.5
Lumbar segment 2ipsiL2-0.5
Lumbar segment 3ipsiL3-0.5
Lumbar segment 4ipsiL4-0.5
Area X L4ipsiSCL10L4-0.5
Spinal cord layer 8 L4ipsiSCL8L4-0.5
Lumbar segment 5ipsiL5-0.5
Lumbar segment 6ipsiL6-0.5
Sacral segment 1ipsiSa1-0.5
Sacral segment 2ipsiSa2-0.5
Sacral segment 3ipsiSa3-0.5
Sacral segment 4ipsiSa4-0.5
Nucleus of DarkschewitschcontraDk-0.5
Oculomotor nucleuscontra3-0.5
Periaqueductal graycontraPAG-0.5
Dorsal periaqueductal graycontraDPAG1
Lateral periaqueductal graycontraLPAG1
Ventrolateral periaqueductal graycontraVLPAG2
Red nucleuscontraR-0.5
Inferior colliculuscontraICOL3
Intercollicular nucleuscontraInCo-0.5
Superior colliculuscontraSC3
Edinger Westphal nucleuscontraEW-0.5
Interstitial nucleus of CajalcontraInC-0.5
Mesencephalic reticular formationcontraMRF3
Cuneiforme nucleuscontraCnF2
Parabrachial nucleuscontraPB3
Gigantocellular reticular nucleus lateral partcontraGirL1
Lateral reticular nucleuscontraLRt-0.5
Lateral reticular nucleus lateral partcontraLRtL2
Principal sensory trigeminal nucleus dorsolateral partcontraPr5DL-0.5
Nucleus of the solitary tractcontraSol1
Nucleus of the solitary tract lateral partcontraSolL1
Nucleus of the solitary tract medial partcontraSolM1
Cuneate nucleuscontraCu3
Rostral part of the ventromedial medulla oblongatacontraRMeObvm2
Nucleus of the vertical limb of the diagonal bandcontraVDB-0.5
Medial septal nucleuscontraMS-0.5
Substantia innominata dorsal partcontraSID0.5
Preoptic anterior regioncontraPAreg3
Lateral hypothalamic areacontraLH3
Lateral hypothalamic area anterior partcontraLHAa0.5
Lateral hypothalamic area posterior partcontraLHAp0.5
Medial division of the hypothalamuscontraMdH2
Dorsal hypothalamic areacontraDA3
Dorsomedial hypothalamic nucleus [Medial zone]contraDM3
Posterior hypothalamic areacontraPHA0.5
Paraventricular hypothalamic nucleuscontraPa3
Suprachiasmatic nucleuscontraSCh3
Supraoptic nucleus [Supraoptic region]contraSO3
Dorsal thalamuscontraDOR2
Central medial thalamic nucleuscontraCM0.5
Centrolateral thalamic nucleuscontraCL2
Parafascicular thalamic nucleuscontraPF0.5
Posterior thalamic nuclear groupcontraPo2
Posterior thalamic nuclear group triangular partcontraPoT2
Mediodorsal thalamic nucleuscontraMD1.5
Submedius thalamic nucleuscontraSub0.5
Paraventricular thalamic nucleus caudal partcontraPVca0.5
Reuniens thalamic nucleuscontraRe0.5
Ventral posterior thalamic nucleus parvicellular partcontraVPPC0.5
Ventral posterolateral thalamic nucleuscontraVPL1
Ventromedial thalamic nucleuscontraVM0.5
Subparafascicular thalamic nucleuscontraSPF0.5
Zona incertacontraZI0.5
Pretectal regioncontraPRT-0.5
Anterior pretectal nucleuscontraAPT-0.5
Posterior pretectal nucleuscontraPPT-0.5
Lateral funiculuscontralf-2
Amygdaloid complexcontraAC-0.5
Central amygdaloid nucleuscontraCe0.5
Globus palliduscontraGP0.5
Ventral pallidumcontraVP-0.5
Accumbens nucleuscontraAc3
Infralimbic cortexcontraIL-0.5
Medial orbital cortexcontraMO-0.5
Septal regioncontraSER-0.5
Lateral septal nucleuscontraLS-0.5
Cervical segment 1contraCS1-0.5
Cervical segment 2contraCS2-0.5
Cervical segment 3contraCS3-0.5
Cervical segment 4contraCS4-0.5
Cervical segment 5contraCS5-0.5
Cervical segment 6contraCS6-0.5
Cervical segment 7contraCS7-0.5
Cervical segment 8contraCS8-0.5
Thoracal segment 1contraT1-0.5
Thoracal segment 2contraT2-0.5
Thoracal segment 3contraT3-0.5
Thoracal segment 4contraT4-0.5
Thoracal segment 5contraT5-0.5
Thoracal segment 6contraT6-0.5
Thoracal segment 7contraT7-0.5
Thoracal segment 8contraT8-0.5
Thoracal segment 9contraT9-0.5
Thoracal segment 10contraT10-0.5
Thoracal segment 11contraT11-0.5
Thoracal segment 12contraT12-0.5
Thoracal segment 13contraT13-0.5
Lumbar segmentscontraLSeg1.5
Lumbar segment 1contraL1-0.5
Lumbar segment 2contraL2-0.5
Lumbar segment 3contraL3-0.5
Lumbar segment 4contraL4-0.5
Area X L4contraSCL10L4-0.5
Spinal cord layer 8 L4contraSCL8L4-0.5
Lumbar segment 5contraL5-0.5
Lumbar segment 6contraL6-0.5
Sacral segment 1contraSa1-0.5
Sacral segment 2contraSa2-0.5
Sacral segment 3contraSa3-0.5
Sacral segment 4contraSa4-0.5
Median nerveipsimen-0.5
Ulnar nerveipsiuln-0.5

Input from

NameSideAbbr.WeightDetails
Lateral hypothalamic areaipsiLH1

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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