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Rat connectome



Submandibular gland right


Abbreviation
OrgsSubg
Color       
Superior regionsExocrine glands

SynonymsAbbr.Language
Submandibular glandOrgsSubgEng
Submandibular salivary gland Eng

Output to

NameSideAbbr.WeightDetails
Glossopharyngo-vagal complex gangliacontraGPVG0
Glossopharyngo-vagal complex gangliaipsiGPVG0
Trigeminal ganglionipsi5Gn3
Dorsal root ganglion C2ipsiDRGC21
Dorsal root ganglion C3ipsiDRGC31
Dorsal root ganglion C4ipsiDRGC41
Dorsal root ganglion C5ipsiDRGC51
Dorsal root ganglion T2ipsiDRGT21
Geniculate ganglioncontraAutoGG0
Jugular ganglioncontraAutoJG0
Nodose ganglioncontraAutoNoG0
Geniculate ganglionipsiAutoGG0
Jugular ganglionipsiAutoJG0
Nodose ganglionipsiAutoNoG0

Input from

NameSideAbbr.WeightDetails
Central graycontraCG-10
Periventricular gray mattercontraPVG-10
Peduncularpontine nucleuscontraPPN-10
Laterodorsal tegmental nucleuscontraLDTg-10
Lateral cerebellar nucleuscontraCERL-10
Medial cerebellar nucleuscontraMed-10
A5 noradrenaline cellscontraA5-10
Locus coeruleuscontraLC-10
Intermediate reticular nucleuscontraIRt-10
Paramedian reticular nucleuscontraPMn-10
Deep mesencephalic nucleuscontraDpMe-10
Pontine reticular nucleus oral partcontraPnO-10
Pontine reticular nucleus ventral partcontraPnV-10
Pontine reticular nucleus caudal partcontraPNC-10
Lateral parabrachial nucleuscontraLPB-10
Parabrachial nucleus medialcontraPBnMe-10
Gigantocellular reticular nucleuscontraGi-10
Gigantocellular reticular nucleus alpha partcontraGiA-10
Gigantocellular reticular nucleus ventral partcontraGiV-10
Lateral reticular nucleuscontraLRt-0.5
Medullary reticular nucleus dorsal partcontraMdDd-10
Ventral medullary reticular formationcontraVMurF-10
Parvicellular reticular nucleuscontraPCRt-10
Parvicellular reticular nucleus alpha partcontraPCRtA-10
Subcoeruleus nucleuscontraSubC-10
Facial nucleus dorsolateral subnucleuscontra7DL-0.5
Motor trigeminal nucleus caudal partcontraMo5C-0.5
Principal sensory trigeminal nucleuscontraPr5-10
Spinal trigeminal nucleus oral partcontraSp5O-10
Nucleus of the solitary tract medial partcontraSolM-10
Dorsal raphe nucleuscontraDR-10
Raphe pallidus nucleuscontraRPa-10
Lateral area of the rostral medullacontraMeObRL1
Nucleus of RollercontraRo-10
Lateral paragigantocellular nucleuscontraLPGi-10
Superior salivatory nucleuscontraSuS-10
Lamina terminaliscontraLTer-0.5
Substantia innominatacontraSI1
Lateral preoptic areacontraLPO2
Medial preoptic areacontraMPA2
Medial preoptic area rostral partcontraMPAR-0.5
Median preoptic nucleuscontraMnPO-0.5
Vascular organ of the lamina terminaliscontraVOLT-0.5
Lateral hypothalamic areacontraLH2
Anteroventral preoptic nucleuscontraAnV-0.5
Arcuate nucleuscontraArc2
Area around the arcuate nucleuscontraArcaa2
Paraventricular hypothalamic nucleuscontraPa2
Perifornical nucleuscontraPeF-10
Retrochiasmatic areacontraRCh1
Subincertal nucleuscontraSubI-10
Subfornical organcontraSFO-0.5
Zona incertacontraZI1
Bed nucleus of the stria terminaliscontraBST2
Central amygdaloid nucleus medial divisioncontraCeM1
Insular cortexcontraICX2
Insular cortex layer 2contraICXL2-0.5
Insular cortex layer 5contraICXL5-0.5
Lateral agranular prefrontal cortexcontraAGl1
Medial agranular prefrontal cortexcontraAGm1
Primary somatosensory cortex layer 5contraS1L51
Secondary somatosensory cortex layer 5contraS2L51
Precommissural nucleuscontraPrC-10
Intermediolateral cell column T1contraIMLT1-0.5
Intermediolateral cell column T2contraIMLT2-0.5
Intermediolateral cell column T3contraIMLT3-0.5
Intermediolateral cell column T4contraIMLT4-0.5
Intermediolateral cell column T5contraIMLT5-0.5
Intermediolateral cell column T6contraIMLT6-0.5
Central grayipsiCG-10
Periventricular gray matteripsiPVG-10
Prerubral fieldipsiPR-10
Peduncularpontine nucleusipsiPPN-10
Laterodorsal tegmental nucleusipsiLDTg-10
Edinger Westphal nucleusipsiEW-10
Lateral cerebellar nucleusipsiCERL-10
Medial cerebellar nucleusipsiMed-10
A5 noradrenaline cellsipsiA5-10
Locus coeruleusipsiLC-10
Intermediate reticular nucleusipsiIRt-10
Paramedian reticular nucleusipsiPMn-10
Deep mesencephalic nucleusipsiDpMe-10
Pontine reticular nucleus oral partipsiPnO-10
Pontine reticular nucleus ventral partipsiPnV-10
Pontine reticular nucleus caudal partipsiPNC-10
Lateral parabrachial nucleusipsiLPB-10
Parabrachial nucleus medialipsiPBnMe-10
Gigantocellular reticular nucleusipsiGi-10
Gigantocellular reticular nucleus alpha partipsiGiA-10
Gigantocellular reticular nucleus ventral partipsiGiV-10
Lateral reticular nucleusipsiLRt-0.5
Medullary reticular nucleus dorsal partipsiMdDd-10
Ventral medullary reticular formationipsiVMurF-10
Parvicellular reticular nucleusipsiPCRt-10
Parvicellular reticular nucleus alpha partipsiPCRtA-10
Subcoeruleus nucleusipsiSubC-10
Facial nucleus dorsolateral subnucleusipsi7DL-0.5
Intertrigeminal nucleusipsiI5-10
Motor trigeminal nucleus caudal partipsiMo5C-0.5
Principal sensory trigeminal nucleusipsiPr5-10
Spinal trigeminal nucleus caudal partipsiSp5C-10
Spinal trigeminal nucleus oral partipsiSp5O-10
Nucleus of the solitary tract medial partipsiSolM-10
Dorsal raphe nucleusipsiDR-10
Raphe magnus nucleusipsiRMg-10
Raphe obscurus nucleusipsiROb-10
Raphe pallidus nucleusipsiRPa-10
Rostral ventrolateral medullaipsiRVLM-0.5
Dorsolateral region of the rostral medullaipsiMeObRdL-0.5
Nucleus of RolleripsiRo-10
Lateral paragigantocellular nucleusipsiLPGi-10
Superior salivatory nucleusipsiSuS-0.5
Lamina terminalisipsiLTer-0.5
Substantia innominataipsiSI-0.5
Lateral preoptic areaipsiLPO-0.5
Medial preoptic areaipsiMPA-0.5
Medial preoptic area rostral partipsiMPAR-0.5
Median preoptic nucleusipsiMnPO-0.5
Vascular organ of the lamina terminalisipsiVOLT-0.5
Lateral hypothalamic areaipsiLH-0.5
Anteroventral preoptic nucleusipsiAnV-0.5
Arcuate nucleusipsiArc-0.5
Area around the arcuate nucleusipsiArcaa-0.5
Paraventricular hypothalamic nucleus parvicellular division dorsal partipsiPaPcD-0.5
Paraventricular hypothalamic nucleusipsiPa-0.5
Paraventricular nucleus lateral parvocellular partipsiPaLp-0.5
Paraventricular nucleus medial parvocellular partipsiPaMep-0.5
A8 dopamine cells retrorubral groupipsiRRF-10
Perifornical nucleusipsiPeF-10
Retrochiasmatic areaipsiRCh-0.5
Subincertal nucleusipsiSubI-10
Subfornical organipsiSFO-0.5
Zona incertaipsiZI-0.5
Bed nucleus of the stria terminalisipsiBST-0.5
Central amygdaloid nucleusipsiCe-0.5
Insular cortexipsiICX-0.5
Insular cortex layer 2ipsiICXL2-0.5
Insular cortex layer 5ipsiICXL5-0.5
Lateral agranular prefrontal cortexipsiAGl1
Medial agranular prefrontal cortexipsiAGm1
Primary somatosensory cortex layer 5ipsiS1L51
Secondary somatosensory cortex layer 5ipsiS2L51
Precommissural nucleusipsiPrC-10
Intermediolateral cell column T1ipsiIMLT1-0.5
Spinal cord layer 1 T1ipsiSCL1T10.5
Intermediolateral cell column T2ipsiIMLT2-0.5
Spinal cord layer 1 T2ipsiSCL1T20.5
Intermediolateral cell column T3ipsiIMLT3-0.5
Intermediolateral cell column T4ipsiIMLT4-0.5
Intermediolateral cell column T5ipsiIMLT5-0.5
Spinal cord layer 1 T5ipsiSCL1T50.5
Intermediolateral cell column T6ipsiIMLT6-0.5
Spinal cord layer 1 T7ipsiSCL1T70.5
Spinal cord layer 1 T10ipsiSCL1T100.5
Thoracic sympathetic gangliaipsiAutoTSG0
Stellate ganglionipsiAutoSteG-0.5
Superior cervical ganglionipsiAutoSCeG4
Caudal part of the superior cervical ganglionipsiAutoSCeGC-0.5
Caudal two-thirds of the superior cervical ganglionipsiAutoSCeGCtt3
Caudal half of the superior cervical ganglionipsiAutoSCeGCh-0.5
Submandibular ganglionipsiAutoGsm-0.5

Key for weights

ValueWeight
-3 unknown
-2 fibers of passage
-1 not clear
-0.5 exists
0 not present
0.5 very light
1 light / sparse
1.5 light / moderate
2 moderate / dense
2.5 moderate / strong
3 strong
4 very strong





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